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The map label for this gene is 182680020

Identifier: 182680020

GI number: 182680020

Start: 3561313

End: 3562320

Strand: Reverse

Name: 182680020

Synonym: Bind_3116

Alternate gene names: NA

Gene position: 3562320-3561313 (Counterclockwise)

Preceding gene: 182680021

Following gene: 182680014

Centisome position: 85.42

GC content: 60.62

Gene sequence:

>1008_bases
ATGGCTAATTCTCCCAATTCCCTGACCGAGAACGTCACCCTTCACACCTTTGGCGATCCTATCGTCGATGCTTGTTTTCT
CGGCCGCACCGCTGCTTTTGCCTTGAACGAGGGGCAAGTGCTGCTTCTCGATGGAGGTCAGGAGAAACGGATCGATGTGC
ATAAGGACGGCATCATCCTGGTCGCTGCGCGGGCTGGTACGGCCTTGCTCACGGGCGGTGATGATGGCCGCCTCATGCGC
ACCTTCCCCGATGGGCGCACCGAGGAAATCGCTGCGCAGAAGGGCAAATGGATCGATGCCGTGGCCGGGCGCGAGGATGG
CGCCATGGCTTGGTCCACTGGCAAACAGGTTTACTGCCGTGATGCGAAGGGCGAGGTCAAAACCTGCGAGGCGCCCTCGA
CCGTGCGCGGCCTTGCTTTCGCGGCCAAGGGCTATCGCCTTGGCATGACTCATTATAATGGCGTGAGCCTCTGGTTTCCC
AATACGGCGGCCGCACCCGAGCGCTTCGAATGGAAGGGCTCCCATCTTGATATGACTTTGTCACCCGATGGACGCTTCGT
GATTTCAACCATGCAGGAAAATGCCTTGCATGGCTGGCGCATCAGCGACAAGGCCAATATGCGGATGTCGGGCTATCCAT
CCAAAACCCGCTCCCTCTCCTGGTCCCATGACGGCAATTGGCTGGCGACATCGGGCGCTGAATCCTGTGTCATCTGGCCG
TTCAAGGACAAGGATGGGCCGATGGGCAAGCAACCGCAGGAATGCGGCGTGCGCAATGCCAAAGTCTCTCGCGTGGCCTT
CCATCCCAAAATGCCGATTATCGCGATCGGTTACGAGGATGGCTGGGTCCTGCTTTGCCGGCTGTCCGATGCCGCTGAAA
TCCTTGTCCATGGGGCCCGCCAGGGCGCCGAGGGGGCGATTACCGCGCTCGCCTGGGATCAGAACGGGCAAAACCTCCTG
TTCGGTGCGGCCGACGGCAAGGCTGGCCTCCTCGCCATGCCGGCTTGA

Upstream 100 bases:

>100_bases
TTCTAGCGTCGGTTCCAGCCAGAAAATGCGTGCCAATCCGGGCCATACGGGTTAAGTCTTCGCCCCAATGATCCCTCTCC
TTCACGCATCTCGATGATTC

Downstream 100 bases:

>100_bases
GTTCTGTCATTCCTCATTCTCGATCCGCGCCATATCCGCGTCCGAAAGGCCGAAATGATGGCCGATCTCATGCACGAGAA
CATGGGTGACGAGTGCGCCG

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: WD-40 Repeat Protein; WD-40 Repeat-Containing G-Protein; WD Repeat-Containing Protein; WD-Repeat Family Protein; G- Repeat Protein; WD40 Domain-Containing Protein; Beta WD-40 Repeat-Containing G-Protein; WD40 Repeat Subgroup; Vegetatible Incompatibility; Wd-40 Repeat Protein

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MANSPNSLTENVTLHTFGDPIVDACFLGRTAAFALNEGQVLLLDGGQEKRIDVHKDGIILVAARAGTALLTGGDDGRLMR
TFPDGRTEEIAAQKGKWIDAVAGREDGAMAWSTGKQVYCRDAKGEVKTCEAPSTVRGLAFAAKGYRLGMTHYNGVSLWFP
NTAAAPERFEWKGSHLDMTLSPDGRFVISTMQENALHGWRISDKANMRMSGYPSKTRSLSWSHDGNWLATSGAESCVIWP
FKDKDGPMGKQPQECGVRNAKVSRVAFHPKMPIIAIGYEDGWVLLCRLSDAAEILVHGARQGAEGAITALAWDQNGQNLL
FGAADGKAGLLAMPA

Sequences:

>Translated_335_residues
MANSPNSLTENVTLHTFGDPIVDACFLGRTAAFALNEGQVLLLDGGQEKRIDVHKDGIILVAARAGTALLTGGDDGRLMR
TFPDGRTEEIAAQKGKWIDAVAGREDGAMAWSTGKQVYCRDAKGEVKTCEAPSTVRGLAFAAKGYRLGMTHYNGVSLWFP
NTAAAPERFEWKGSHLDMTLSPDGRFVISTMQENALHGWRISDKANMRMSGYPSKTRSLSWSHDGNWLATSGAESCVIWP
FKDKDGPMGKQPQECGVRNAKVSRVAFHPKMPIIAIGYEDGWVLLCRLSDAAEILVHGARQGAEGAITALAWDQNGQNLL
FGAADGKAGLLAMPA
>Mature_334_residues
ANSPNSLTENVTLHTFGDPIVDACFLGRTAAFALNEGQVLLLDGGQEKRIDVHKDGIILVAARAGTALLTGGDDGRLMRT
FPDGRTEEIAAQKGKWIDAVAGREDGAMAWSTGKQVYCRDAKGEVKTCEAPSTVRGLAFAAKGYRLGMTHYNGVSLWFPN
TAAAPERFEWKGSHLDMTLSPDGRFVISTMQENALHGWRISDKANMRMSGYPSKTRSLSWSHDGNWLATSGAESCVIWPF
KDKDGPMGKQPQECGVRNAKVSRVAFHPKMPIIAIGYEDGWVLLCRLSDAAEILVHGARQGAEGAITALAWDQNGQNLLF
GAADGKAGLLAMPA

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36092; Mature: 35961

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSPNSLTENVTLHTFGDPIVDACFLGRTAAFALNEGQVLLLDGGQEKRIDVHKDGIIL
CCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEEEECCCCEEEEECCCCCEEEEECCCEEE
VAARAGTALLTGGDDGRLMRTFPDGRTEEIAAQKGKWIDAVAGREDGAMAWSTGKQVYCR
EEECCCEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEEE
DAKGEVKTCEAPSTVRGLAFAAKGYRLGMTHYNGVSLWFPNTAAAPERFEWKGSHLDMTL
CCCCCEEECCCCCHHHHEEEEECCEEEECEEECCEEEECCCCCCCCCCEEECCCEEEEEE
SPDGRFVISTMQENALHGWRISDKANMRMSGYPSKTRSLSWSHDGNWLATSGAESCVIWP
CCCCCEEEEEECCCCCCCEEECCCCCEEECCCCCHHCEEEECCCCCEEEECCCCEEEEEE
FKDKDGPMGKQPQECGVRNAKVSRVAFHPKMPIIAIGYEDGWVLLCRLSDAAEILVHGAR
EECCCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCHHEEHEECCC
QGAEGAITALAWDQNGQNLLFGAADGKAGLLAMPA
CCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure 
ANSPNSLTENVTLHTFGDPIVDACFLGRTAAFALNEGQVLLLDGGQEKRIDVHKDGIIL
CCCCCCCCCCEEEEECCCHHHHHHHHCCEEEEEECCCCEEEEECCCCCEEEEECCCEEE
VAARAGTALLTGGDDGRLMRTFPDGRTEEIAAQKGKWIDAVAGREDGAMAWSTGKQVYCR
EEECCCEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEEE
DAKGEVKTCEAPSTVRGLAFAAKGYRLGMTHYNGVSLWFPNTAAAPERFEWKGSHLDMTL
CCCCCEEECCCCCHHHHEEEEECCEEEECEEECCEEEECCCCCCCCCCEEECCCEEEEEE
SPDGRFVISTMQENALHGWRISDKANMRMSGYPSKTRSLSWSHDGNWLATSGAESCVIWP
CCCCCEEEEEECCCCCCCEEECCCCCEEECCCCCHHCEEEECCCCCEEEECCCCEEEEEE
FKDKDGPMGKQPQECGVRNAKVSRVAFHPKMPIIAIGYEDGWVLLCRLSDAAEILVHGAR
EECCCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCHHEEHEECCC
QGAEGAITALAWDQNGQNLLFGAADGKAGLLAMPA
CCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA