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The map label for this gene is oprB [H]

Identifier: 182679974

GI number: 182679974

Start: 3504786

End: 3506153

Strand: Reverse

Name: oprB [H]

Synonym: Bind_3070

Alternate gene names: 182679974

Gene position: 3506153-3504786 (Counterclockwise)

Preceding gene: 182679975

Following gene: 182679973

Centisome position: 84.08

GC content: 59.06

Gene sequence:

>1368_bases
ATGGCATCGAAAAAAGCAGGGCGGCAGCTTCTGCGGGCCACGAGAATCGCGGGGATTTTGGCCTTGGGTTTTGGACTGAC
GCAGGGCGGGACGGCAGCACGGGCCGCGGATGTCGCGCCGCCAGCCCAAGTGGCGGTGTCGCCCGCGCCTCCCGTCCCGG
AACATGACTGGGCCTTGGGGACTTGGGGCGGGGTGCGCTCCGATCTTTATCGCAAGGGTATCGATTTCCAATTCGTCTGG
GTCAGCGAAGTCGCCTATAACATGACCGGCGGCGCGGAAAACCGCATCGCCCAGGCCGGCCAGTTGAACCTTGGCGTCAC
CTTCGATCTGGAAAAATTATTCGGCGATCCGGGTGCCATCTTCCAGATGACCTTCGATAAGCGCGAGGGCCGCAATCTCA
ATCATGATGCCGGCCTCGACATGCTGGTCCAGCCGCAGGAAGTCTATGGCCGCGGTGACATCTGGCGCCTGACGCAATTC
TGGTACGATCAGAAATTCGCCAATGGCGTGATCGATTGGAAAATCGGCAAGATGGCGGTGAGTGAAGACATCACCCAATA
TCCTTGCGTGTTCATGAACCTGTCGTTCTGCGGCTCGGCGCCGGGCCGCGGCCTCGCCGGCAATTATTTCTTCAATTATC
CGATCGGCCAATGGGGCACGCGGGTGCGCTTCAACGCGCCGGAAGCCTATTTCACCCTGGCGGCCTATCAGATGAACCCC
AACGTCTTGAAACAAAGCTATGGGGTGAATTTCGATTTCAGCGGCGGCAACGGGGTCCTGCTGCCGATCGAATTCGGCTG
GCTGCCGGCTTTTGATGGAGGCCGTCTGCCCGGTGTCTACCAATTCACCGCCTGGTATGGCTCGCAGCAGGCTCAGGACG
TCGTGGCCCTCAATTATCCGAATCTCGTGCCGCTCAGCGATCTGCCGGTGGGTGGCCGCTGGGGCGTGAGCTTCCAGATG
TCGCAGCAGCTCACGCATCCTTCCGATGATCATCCCAAACAGGGCCTGAGCCTGATCGGCAGCATGGTGATGCTTGATCG
GGCGACCTCGACGCTCAACAACCAAGAGACCATCGGCCTCGTCTATCACGGACCGTTCGAGAACCGTCAGGGCGATGAAA
TCGCCATTGCCTGGGGCCGCACGGAGGTCAATTCGCGCCTGACCAATGCCGCGATCCTGTCCAATGTCCTCGTGCCTGGC
TCAGCCGTCGTGCGACGCGCCGAATATCCCTTGGAAATCTACTACAACTTCCATGCCTATAACGGCATCGATGTGCGTCC
GAACTTCCAATGGATTCACTGCCCAGGTGGTGTTTGTAACAAACCGGATGTGGCCATCCTCGGTGTGAAAACTGTCATTA
ATTTCTGA

Upstream 100 bases:

>100_bases
TCTGTGATTCTCGATACGAGGCAGGGGATTGAAAGGCTTCATCCGGCTGACATCATCCGCGTACCAGGATGGACGGCATG
AAGCCTCAAGGGGGGTGAGA

Downstream 100 bases:

>100_bases
AGCTTTCAAGGCAAGGCTTTGCCTTCAACAAGGGTGATGTATCGTCGCCAAGTTTTTATGTTACTTGTATGTTGATGTAC
CGCTTTCATCCAGTATTCTA

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MASKKAGRQLLRATRIAGILALGFGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGTWGGVRSDLYRKGIDFQFVW
VSEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIFQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQF
WYDQKFANGVIDWKIGKMAVSEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNP
NVLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQDVVALNYPNLVPLSDLPVGGRWGVSFQM
SQQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLVYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPG
SAVVRRAEYPLEIYYNFHAYNGIDVRPNFQWIHCPGGVCNKPDVAILGVKTVINF

Sequences:

>Translated_455_residues
MASKKAGRQLLRATRIAGILALGFGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGTWGGVRSDLYRKGIDFQFVW
VSEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIFQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQF
WYDQKFANGVIDWKIGKMAVSEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNP
NVLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQDVVALNYPNLVPLSDLPVGGRWGVSFQM
SQQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLVYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPG
SAVVRRAEYPLEIYYNFHAYNGIDVRPNFQWIHCPGGVCNKPDVAILGVKTVINF
>Mature_454_residues
ASKKAGRQLLRATRIAGILALGFGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALGTWGGVRSDLYRKGIDFQFVWV
SEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAIFQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFW
YDQKFANGVIDWKIGKMAVSEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNPN
VLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQDVVALNYPNLVPLSDLPVGGRWGVSFQMS
QQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGLVYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGS
AVVRRAEYPLEIYYNFHAYNGIDVRPNFQWIHCPGGVCNKPDVAILGVKTVINF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 50034; Mature: 49903

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKKAGRQLLRATRIAGILALGFGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE
TWGGVRSDLYRKGIDFQFVWVSEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAI
CCCCHHHHHHHCCCCEEEEEEEHEEEECCCCCCHHHHCCCCEEEEEEEEHHHHHCCCCEE
FQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFWYDQKFANGVIDWKIGKMAV
EEEEECCCCCCCCCCCCCCCEEECHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEECCEEH
SEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNP
HCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEEEEECCH
NVLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQDVVALNYP
HHHHHHCCCEEEECCCCEEEEEEEECCEECCCCCCCCCEEEEEEECCCCCCCCEEEECCC
NLVPLSDLPVGGRWGVSFQMSQQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGL
CCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGSAVVRRAEYPLEIYYNFHAY
EEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEE
NGIDVRPNFQWIHCPGGVCNKPDVAILGVKTVINF
CCEEECCCCEEEECCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
ASKKAGRQLLRATRIAGILALGFGLTQGGTAARAADVAPPAQVAVSPAPPVPEHDWALG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE
TWGGVRSDLYRKGIDFQFVWVSEVAYNMTGGAENRIAQAGQLNLGVTFDLEKLFGDPGAI
CCCCHHHHHHHCCCCEEEEEEEHEEEECCCCCCHHHHCCCCEEEEEEEEHHHHHCCCCEE
FQMTFDKREGRNLNHDAGLDMLVQPQEVYGRGDIWRLTQFWYDQKFANGVIDWKIGKMAV
EEEEECCCCCCCCCCCCCCCEEECHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEECCEEH
SEDITQYPCVFMNLSFCGSAPGRGLAGNYFFNYPIGQWGTRVRFNAPEAYFTLAAYQMNP
HCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEEEEECCH
NVLKQSYGVNFDFSGGNGVLLPIEFGWLPAFDGGRLPGVYQFTAWYGSQQAQDVVALNYP
HHHHHHCCCEEEECCCCEEEEEEEECCEECCCCCCCCCEEEEEEECCCCCCCCEEEECCC
NLVPLSDLPVGGRWGVSFQMSQQLTHPSDDHPKQGLSLIGSMVMLDRATSTLNNQETIGL
CCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VYHGPFENRQGDEIAIAWGRTEVNSRLTNAAILSNVLVPGSAVVRRAEYPLEIYYNFHAY
EEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEE
NGIDVRPNFQWIHCPGGVCNKPDVAILGVKTVINF
CCEEECCCCEEEECCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]