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The map label for this gene is yobV [H]

Identifier: 182679855

GI number: 182679855

Start: 3356817

End: 3357791

Strand: Reverse

Name: yobV [H]

Synonym: Bind_2944

Alternate gene names: 182679855

Gene position: 3357791-3356817 (Counterclockwise)

Preceding gene: 182679869

Following gene: 182679853

Centisome position: 80.52

GC content: 62.36

Gene sequence:

>975_bases
ATGCGAGCAAGCCGGCTTCTTTCCATTCTCACAACGCTACAGGCCCGGGGACGGGTGACCGCGCAGGCGCTTGCTGACGA
ATGCGAGGTGTCGCTCCGGACGATCTACCGCGATATCGATGCCCTGAGCGCCGCCGGTATCCCGGTCTATAGCGAGCGAG
GATCGGAGGGTGGGTATCGATTGCTCGACGGCTATCGTGTTCGGTTGAATGGCCTTTCGCCCCGGGAAGCGGAGTCGCTG
TTTCTTGCGGGACTGTCTGGCCCCGCAGCCGATCTTGGGCTCGGTGGCGTCATGGCCGCGGCACAGACCAAGCTCCTCGC
GGCTCTGCCGCAGGATTTGCGATCGAGCGCGGAACGGATGCGCAGCCGCTTCCATCTCGACGCGCCGGCTTGGTTCTCCG
AAGCCGAACAGCCAGCTCATTTGGCGACAATCGCCGATGCCGTGTGGCGTCAGGCAGCCATCCAGATGCGCTATCAAAGC
TGGAAAGCCGAAAAGAACCGCCGGGTTGCACCGCTCGGGATCGTGTTGAAGGGCGGGTCCTGGTATCTCGTCGGCCAGGT
CGGTGACAGTGCCCGAACCTACAGGATCTCCCGCATACTCGAACTCACTGTGCTCGAGGAACAGTTCGAACGGCCCGAAG
CGTTCGACCTTCCCATCTATTGGCGCAAAGCCACCGAGCAGTTGGAAGCAGAGCTCCATCCGATCACCGCGAAGCTTCGT
CTCTCTCCAACCGGCGTGAAACTTCTGGCCGCGCTCAGCCCGCCCTACGTCCGGGATAGGACGAAGCTGGATCAAGAAGC
AGACAGTGAAGGTTGGCGTATCGCGACACTGCCTGTCGGAAAGATGTGGCAAGCCGTTGCCGACCTGTTGCGTCTCGGAG
CGGAGGCCGAGGTGCTCGAGCCGCCTGAACTTCGCGACAAGATGGCAGAGATCACAAGCGACATGGCGCGGTCCTATCGC
GAGCCGCGCTCCTGA

Upstream 100 bases:

>100_bases
TTGTCATGTGGCTCTCGCTTGCTGCTGATTTCACGATGACGCTCAATCTATCGCGCTATACCTGTCAGATTCTGTCAGGT
TGGTTTAGGATGATCGCATC

Downstream 100 bases:

>100_bases
TCCTGTTCTGCCACATGTTACCTGCTCGAATGTGTGAGATCTGGCGCGACACGCTGGAGTTCGTTCGTCAGAATGCCGCC
TGTGTAATCATTCGGCAGGC

Product: helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRASRLLSILTTLQARGRVTAQALADECEVSLRTIYRDIDALSAAGIPVYSERGSEGGYRLLDGYRVRLNGLSPREAESL
FLAGLSGPAADLGLGGVMAAAQTKLLAALPQDLRSSAERMRSRFHLDAPAWFSEAEQPAHLATIADAVWRQAAIQMRYQS
WKAEKNRRVAPLGIVLKGGSWYLVGQVGDSARTYRISRILELTVLEEQFERPEAFDLPIYWRKATEQLEAELHPITAKLR
LSPTGVKLLAALSPPYVRDRTKLDQEADSEGWRIATLPVGKMWQAVADLLRLGAEAEVLEPPELRDKMAEITSDMARSYR
EPRS

Sequences:

>Translated_324_residues
MRASRLLSILTTLQARGRVTAQALADECEVSLRTIYRDIDALSAAGIPVYSERGSEGGYRLLDGYRVRLNGLSPREAESL
FLAGLSGPAADLGLGGVMAAAQTKLLAALPQDLRSSAERMRSRFHLDAPAWFSEAEQPAHLATIADAVWRQAAIQMRYQS
WKAEKNRRVAPLGIVLKGGSWYLVGQVGDSARTYRISRILELTVLEEQFERPEAFDLPIYWRKATEQLEAELHPITAKLR
LSPTGVKLLAALSPPYVRDRTKLDQEADSEGWRIATLPVGKMWQAVADLLRLGAEAEVLEPPELRDKMAEITSDMARSYR
EPRS
>Mature_324_residues
MRASRLLSILTTLQARGRVTAQALADECEVSLRTIYRDIDALSAAGIPVYSERGSEGGYRLLDGYRVRLNGLSPREAESL
FLAGLSGPAADLGLGGVMAAAQTKLLAALPQDLRSSAERMRSRFHLDAPAWFSEAEQPAHLATIADAVWRQAAIQMRYQS
WKAEKNRRVAPLGIVLKGGSWYLVGQVGDSARTYRISRILELTVLEEQFERPEAFDLPIYWRKATEQLEAELHPITAKLR
LSPTGVKLLAALSPPYVRDRTKLDQEADSEGWRIATLPVGKMWQAVADLLRLGAEAEVLEPPELRDKMAEITSDMARSYR
EPRS

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35969; Mature: 35969

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASRLLSILTTLQARGRVTAQALADECEVSLRTIYRDIDALSAAGIPVYSERGSEGGYR
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEE
LLDGYRVRLNGLSPREAESLFLAGLSGPAADLGLGGVMAAAQTKLLAALPQDLRSSAERM
EECCEEEEECCCCCCHHHHEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RSRFHLDAPAWFSEAEQPAHLATIADAVWRQAAIQMRYQSWKAEKNRRVAPLGIVLKGGS
HHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
WYLVGQVGDSARTYRISRILELTVLEEQFERPEAFDLPIYWRKATEQLEAELHPITAKLR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE
LSPTGVKLLAALSPPYVRDRTKLDQEADSEGWRIATLPVGKMWQAVADLLRLGAEAEVLE
ECCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC
PPELRDKMAEITSDMARSYREPRS
CHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRASRLLSILTTLQARGRVTAQALADECEVSLRTIYRDIDALSAAGIPVYSERGSEGGYR
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEE
LLDGYRVRLNGLSPREAESLFLAGLSGPAADLGLGGVMAAAQTKLLAALPQDLRSSAERM
EECCEEEEECCCCCCHHHHEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RSRFHLDAPAWFSEAEQPAHLATIADAVWRQAAIQMRYQSWKAEKNRRVAPLGIVLKGGS
HHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
WYLVGQVGDSARTYRISRILELTVLEEQFERPEAFDLPIYWRKATEQLEAELHPITAKLR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE
LSPTGVKLLAALSPPYVRDRTKLDQEADSEGWRIATLPVGKMWQAVADLLRLGAEAEVLE
ECCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC
PPELRDKMAEITSDMARSYREPRS
CHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]