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The map label for this gene is 182679848

Identifier: 182679848

GI number: 182679848

Start: 3349716

End: 3350951

Strand: Reverse

Name: 182679848

Synonym: Bind_2937

Alternate gene names: NA

Gene position: 3350951-3349716 (Counterclockwise)

Preceding gene: 182679849

Following gene: 182679847

Centisome position: 80.36

GC content: 61.65

Gene sequence:

>1236_bases
TTGGAACTCGCCGCGACAGCCGATTCGGAGCAGGACAGTCAGAATTCGGCGGAAACCCTTCCAGCGCGCGACGTGCTGAC
GGCGCAGGAGGAAGAACGTCTGGCGTTGGCCGAGGCGGAAACGCGCAATGCGATGCGGTCGCGTTTGGGATGGGAAGTCC
TGCTCGCGGCTTCGGCCGTGATTCATCTGTGCCTCATTTTGGCGCTTATCGCTCTATGGCCAGATGTAACGTCCGATCCG
CAAAAGGCCCATGAGGAAATTCCCGTGGAAGTGGTCCTGGAGCAAAAGCCTGAGACGCCCCTGAGCACGCCGACTGGGGA
GGGAACGTCCGCGGCCCTTGCTGCAGCCAAGCAGAAGGAAGAGCAGGCCTCAGACGCTGACGCGGCTAAAAACGCAACTG
GGGGTGGAGAGGAAGGGAAGGATCCAACCAAGTCTGAAACGGCCAAGGCGGACTCTCTTAAGTCCGAGCAGGACAAACCT
GAGCAATCCAAATCGAATTTGGCTAAAATGGAGCCGCCTAAACAGGAAGCATCCAAGCCGGAGACGACCAAGGCCGAAAC
AGCTAAGTCAGAGCTGGCCAGGCCGGCCACTCAATCTCATGCGGCCAAGTCACAAACTGCCAAGTCACAAGCGGCGAAGC
CTCAGCCGAAAGCGTCTGACGCGAATAAAACCGCGGCCGCCACGCAGCGGGAACACGCACGTGCCGAGCGAGAGGAAGCC
CCGACGCAGACTCCGCCGCGCTATGCCATGGCGCCCAATGGCGGGCGGGCGGGCGGGACGAATGGCGCCCCCGCGCGTTC
CATGCCCGCTCCTCAACGGGGAGGTCAGTCGCCGCAAGGCTCGTCGGAAAGCGTTTGGGACCAGGCCCTGGCGCATCCAG
GTTATGGCTTCGATCCCGATCGTTTCCGCGCTGTCGCCGTGCCTATGCCGAGCGAGGATGGCGACGAATTGATGAGCTAT
AAGGTGATCGTCTTCGGTCTCCTGGAACGAGCCAAACATTATCCAGAAACGGCCTTGCAGCGCGGTGCGCGGGGCCGCGC
CGTGGTGGGGTTCAGCCTTGACGACGCGGGGCGGGTGATCAATCTCGAATTGCTGCAATCCAGCGGCGAGGCCGATCTTG
ATGTCGAAAGCCTCGCCCTTGTCGATCGGGCAAGCCCGTTTCCAGTGCCGCCACCCGGCGCACAGAGGACATTTGCGGCG
GAAATCGGGTTTGGCGTCAGCAATGATGACGAATGA

Upstream 100 bases:

>100_bases
AGATGGATATTCGGGAAAGGATTCAAGAATAGTTCTGAATAATCGTCTACATTATGGTGTCTTTTCGCCTTCACGGCGGT
TTTCGAGCAAAGGCAACGGA

Downstream 100 bases:

>100_bases
ACCATTCGTCATTGCGCCGCAAAGCGGTACGAATCGCAAATGGATGATCGGAATTTAGCGGCGCCGTGCTGCCTAAAGTC
CTTGGCCGCCCCCTTGTCGG

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MELAATADSEQDSQNSAETLPARDVLTAQEEERLALAEAETRNAMRSRLGWEVLLAASAVIHLCLILALIALWPDVTSDP
QKAHEEIPVEVVLEQKPETPLSTPTGEGTSAALAAAKQKEEQASDADAAKNATGGGEEGKDPTKSETAKADSLKSEQDKP
EQSKSNLAKMEPPKQEASKPETTKAETAKSELARPATQSHAAKSQTAKSQAAKPQPKASDANKTAAATQREHARAEREEA
PTQTPPRYAMAPNGGRAGGTNGAPARSMPAPQRGGQSPQGSSESVWDQALAHPGYGFDPDRFRAVAVPMPSEDGDELMSY
KVIVFGLLERAKHYPETALQRGARGRAVVGFSLDDAGRVINLELLQSSGEADLDVESLALVDRASPFPVPPPGAQRTFAA
EIGFGVSNDDE

Sequences:

>Translated_411_residues
MELAATADSEQDSQNSAETLPARDVLTAQEEERLALAEAETRNAMRSRLGWEVLLAASAVIHLCLILALIALWPDVTSDP
QKAHEEIPVEVVLEQKPETPLSTPTGEGTSAALAAAKQKEEQASDADAAKNATGGGEEGKDPTKSETAKADSLKSEQDKP
EQSKSNLAKMEPPKQEASKPETTKAETAKSELARPATQSHAAKSQTAKSQAAKPQPKASDANKTAAATQREHARAEREEA
PTQTPPRYAMAPNGGRAGGTNGAPARSMPAPQRGGQSPQGSSESVWDQALAHPGYGFDPDRFRAVAVPMPSEDGDELMSY
KVIVFGLLERAKHYPETALQRGARGRAVVGFSLDDAGRVINLELLQSSGEADLDVESLALVDRASPFPVPPPGAQRTFAA
EIGFGVSNDDE
>Mature_411_residues
MELAATADSEQDSQNSAETLPARDVLTAQEEERLALAEAETRNAMRSRLGWEVLLAASAVIHLCLILALIALWPDVTSDP
QKAHEEIPVEVVLEQKPETPLSTPTGEGTSAALAAAKQKEEQASDADAAKNATGGGEEGKDPTKSETAKADSLKSEQDKP
EQSKSNLAKMEPPKQEASKPETTKAETAKSELARPATQSHAAKSQTAKSQAAKPQPKASDANKTAAATQREHARAEREEA
PTQTPPRYAMAPNGGRAGGTNGAPARSMPAPQRGGQSPQGSSESVWDQALAHPGYGFDPDRFRAVAVPMPSEDGDELMSY
KVIVFGLLERAKHYPETALQRGARGRAVVGFSLDDAGRVINLELLQSSGEADLDVESLALVDRASPFPVPPPGAQRTFAA
EIGFGVSNDDE

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43465; Mature: 43465

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAATADSEQDSQNSAETLPARDVLTAQEEERLALAEAETRNAMRSRLGWEVLLAASAV
CCCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHLCLILALIALWPDVTSDPQKAHEEIPVEVVLEQKPETPLSTPTGEGTSAALAAAKQKE
HHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
EQASDADAAKNATGGGEEGKDPTKSETAKADSLKSEQDKPEQSKSNLAKMEPPKQEASKP
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCC
ETTKAETAKSELARPATQSHAAKSQTAKSQAAKPQPKASDANKTAAATQREHARAEREEA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PTQTPPRYAMAPNGGRAGGTNGAPARSMPAPQRGGQSPQGSSESVWDQALAHPGYGFDPD
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHH
RFRAVAVPMPSEDGDELMSYKVIVFGLLERAKHYPETALQRGARGRAVVGFSLDDAGRVI
HEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCEE
NLELLQSSGEADLDVESLALVDRASPFPVPPPGAQRTFAAEIGFGVSNDDE
EEEEHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCCCCCCC
>Mature Secondary Structure
MELAATADSEQDSQNSAETLPARDVLTAQEEERLALAEAETRNAMRSRLGWEVLLAASAV
CCCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHLCLILALIALWPDVTSDPQKAHEEIPVEVVLEQKPETPLSTPTGEGTSAALAAAKQKE
HHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
EQASDADAAKNATGGGEEGKDPTKSETAKADSLKSEQDKPEQSKSNLAKMEPPKQEASKP
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCC
ETTKAETAKSELARPATQSHAAKSQTAKSQAAKPQPKASDANKTAAATQREHARAEREEA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PTQTPPRYAMAPNGGRAGGTNGAPARSMPAPQRGGQSPQGSSESVWDQALAHPGYGFDPD
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHH
RFRAVAVPMPSEDGDELMSYKVIVFGLLERAKHYPETALQRGARGRAVVGFSLDDAGRVI
HEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCEE
NLELLQSSGEADLDVESLALVDRASPFPVPPPGAQRTFAAEIGFGVSNDDE
EEEEHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA