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The map label for this gene is ybeB [H]

Identifier: 182679845

GI number: 182679845

Start: 3345757

End: 3346143

Strand: Reverse

Name: ybeB [H]

Synonym: Bind_2934

Alternate gene names: 182679845

Gene position: 3346143-3345757 (Counterclockwise)

Preceding gene: 182679846

Following gene: 182679844

Centisome position: 80.24

GC content: 56.33

Gene sequence:

>387_bases
GTGCAACTCCCTCCCCAACCGATACATGGTTCGACTGAACCCGATATCGGTGCCGTCGTGCGGACGGTTTTGACGAGCCT
CGAGGATTCCAAAGCCGAGGATATTGTCGCCATCGATCTGCATGGAAAAACCACGATCGCCGATGCCATGATCATCGCCT
CCGGCCGTTCCAATACGCATGTCGGAGCCATCGCCGATCATTTGCTCAAGGTCCTTAAGGATCTTGGTCGTGTTGCACCG
AAAATCGAAGGCTTGCAAAGCTGCGATTGGGTGCTGGTCGATGCCGGCGATGTCATCGTCCATGTTTTCCGGCCTGAAGT
CCGTCAGTTCTATAATCTCGAGAAAATGTGGGGGCTCGACCGGCCGGCCGAGCAACGCCCCCTCTGA

Upstream 100 bases:

>100_bases
ACTTTTTTGTCATTTACGTCATTTTAAGACTGGTCCCGGTCCCATCGACCGGTGCTGCAAAAGGATCGAAACGCTGAACC
CTGCGATTCTTTCTGGGGCG

Downstream 100 bases:

>100_bases
CGATTGTTGAGGCCCAAGATCTTGGCGGTCCGGCAGGTTCTATCCACGGTCATCTGTATGATTGTGGTGTGAGAGCCACC
GGACATGCTGGATTTTTTGT

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQLPPQPIHGSTEPDIGAVVRTVLTSLEDSKAEDIVAIDLHGKTTIADAMIIASGRSNTHVGAIADHLLKVLKDLGRVAP
KIEGLQSCDWVLVDAGDVIVHVFRPEVRQFYNLEKMWGLDRPAEQRPL

Sequences:

>Translated_128_residues
MQLPPQPIHGSTEPDIGAVVRTVLTSLEDSKAEDIVAIDLHGKTTIADAMIIASGRSNTHVGAIADHLLKVLKDLGRVAP
KIEGLQSCDWVLVDAGDVIVHVFRPEVRQFYNLEKMWGLDRPAEQRPL
>Mature_128_residues
MQLPPQPIHGSTEPDIGAVVRTVLTSLEDSKAEDIVAIDLHGKTTIADAMIIASGRSNTHVGAIADHLLKVLKDLGRVAP
KIEGLQSCDWVLVDAGDVIVHVFRPEVRQFYNLEKMWGLDRPAEQRPL

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=100, Percent_Identity=36, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081768, Length=95, Percent_Identity=46.3157894736842, Blast_Score=97, Evalue=3e-22,
Organism=Drosophila melanogaster, GI19923046, Length=103, Percent_Identity=29.126213592233, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 14024; Mature: 14024

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPPQPIHGSTEPDIGAVVRTVLTSLEDSKAEDIVAIDLHGKTTIADAMIIASGRSNTH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHEEECCCCCCC
VGAIADHLLKVLKDLGRVAPKIEGLQSCDWVLVDAGDVIVHVFRPEVRQFYNLEKMWGLD
HHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEECCCEEEEECCHHHHHHHCHHHHHCCC
RPAEQRPL
CCCCCCCC
>Mature Secondary Structure
MQLPPQPIHGSTEPDIGAVVRTVLTSLEDSKAEDIVAIDLHGKTTIADAMIIASGRSNTH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHEEECCCCCCC
VGAIADHLLKVLKDLGRVAPKIEGLQSCDWVLVDAGDVIVHVFRPEVRQFYNLEKMWGLD
HHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEECCCEEEEECCHHHHHHHCHHHHHCCC
RPAEQRPL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]