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The map label for this gene is scpB [H]

Identifier: 182679752

GI number: 182679752

Start: 3237077

End: 3237748

Strand: Reverse

Name: scpB [H]

Synonym: Bind_2840

Alternate gene names: 182679752

Gene position: 3237748-3237077 (Counterclockwise)

Preceding gene: 182679753

Following gene: 182679751

Centisome position: 77.64

GC content: 64.73

Gene sequence:

>672_bases
ATGGCACGACGGTCTCGTTCCGATCCATCCTTCGAGCGCGAGCTCGAGGCTCTACCGCCCGCCTTGCGCTGGCGTGAATG
GCTGCGGCGCGTCGAAGCGCTCCTCTTCGCCGCCGCCGAGCCAGTCTCGCGGGACGTGCTTGCCCAGGTAGTTGGCGCTG
CCTGCGTGATCGAGGACCTCATCGCCGATCTGCGCGAGGATCTGCGAGGGCGCCCCTACGAGGTCGTGGCTGTCGCGGGC
GGCTGGCAGCTGCGGACAAGACCGTCTCTGGCGCCGGTTTTGCGCGCGGCGGGGTTCTTGGCGGGACCGGATGGCGGCCC
CAGCCAGAAGGATGCGACATTGCTCCTGGCGATCGGGCATTTCCAGCCGATCACTCGCGCGCGGCTGGGTGCTTTCTTCG
GCCGTGAGATCAGCCGCGATACCTTGGCCTATCTCAAGGCCAAAGGCTGGCTCGGTGCAGGACCGCGCAGCCCCGAGCCG
GGGGCACCGGTCACCTATGTTACGACGCAAGCCTTCCTGAGAGAGTTTGGCTTCAACAGTCTTGCCGATCTGCCAGGGCA
GGACCTGTTTGCCGCCTATTGGACAGACGGAGAAGGAGAAGCAGACTTGGGGCCGTTGTTGCCTCAGCAAGAGGCGGAGA
TCGAGGAGAAAGGCACAGATTACGAAAAATGA

Upstream 100 bases:

>100_bases
GCGATCGGGCCGGACGTCGGCTGTTCGATCATCTGGTCGCCCAAGGCGCCGTCCGCGAATTGTCGGGTCGTGCCGCTTTC
CGGTTATATGGGCTGTGACC

Downstream 100 bases:

>100_bases
CTCGTTCCGATCTAAGCGCCGGGGCGGTGCTTCCGTGTCCGCCGGCTGGAAGGATTGGAGAGCCAGCAGAGTTGCGATAG
CTGGAACTTTGGTTGTACCT

Product: chromosome segregation and condensation protein ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MARRSRSDPSFERELEALPPALRWREWLRRVEALLFAAAEPVSRDVLAQVVGAACVIEDLIADLREDLRGRPYEVVAVAG
GWQLRTRPSLAPVLRAAGFLAGPDGGPSQKDATLLLAIGHFQPITRARLGAFFGREISRDTLAYLKAKGWLGAGPRSPEP
GAPVTYVTTQAFLREFGFNSLADLPGQDLFAAYWTDGEGEADLGPLLPQQEAEIEEKGTDYEK

Sequences:

>Translated_223_residues
MARRSRSDPSFERELEALPPALRWREWLRRVEALLFAAAEPVSRDVLAQVVGAACVIEDLIADLREDLRGRPYEVVAVAG
GWQLRTRPSLAPVLRAAGFLAGPDGGPSQKDATLLLAIGHFQPITRARLGAFFGREISRDTLAYLKAKGWLGAGPRSPEP
GAPVTYVTTQAFLREFGFNSLADLPGQDLFAAYWTDGEGEADLGPLLPQQEAEIEEKGTDYEK
>Mature_222_residues
ARRSRSDPSFERELEALPPALRWREWLRRVEALLFAAAEPVSRDVLAQVVGAACVIEDLIADLREDLRGRPYEVVAVAGG
WQLRTRPSLAPVLRAAGFLAGPDGGPSQKDATLLLAIGHFQPITRARLGAFFGREISRDTLAYLKAKGWLGAGPRSPEPG
APVTYVTTQAFLREFGFNSLADLPGQDLFAAYWTDGEGEADLGPLLPQQEAEIEEKGTDYEK

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 24401; Mature: 24270

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRSRSDPSFERELEALPPALRWREWLRRVEALLFAAAEPVSRDVLAQVVGAACVIEDL
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IADLREDLRGRPYEVVAVAGGWQLRTRPSLAPVLRAAGFLAGPDGGPSQKDATLLLAIGH
HHHHHHHHCCCCEEEEEEECCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC
FQPITRARLGAFFGREISRDTLAYLKAKGWLGAGPRSPEPGAPVTYVTTQAFLREFGFNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCH
LADLPGQDLFAAYWTDGEGEADLGPLLPQQEAEIEEKGTDYEK
HHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARRSRSDPSFERELEALPPALRWREWLRRVEALLFAAAEPVSRDVLAQVVGAACVIEDL
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IADLREDLRGRPYEVVAVAGGWQLRTRPSLAPVLRAAGFLAGPDGGPSQKDATLLLAIGH
HHHHHHHHCCCCEEEEEEECCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC
FQPITRARLGAFFGREISRDTLAYLKAKGWLGAGPRSPEPGAPVTYVTTQAFLREFGFNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCH
LADLPGQDLFAAYWTDGEGEADLGPLLPQQEAEIEEKGTDYEK
HHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]