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The map label for this gene is ydgJ [C]

Identifier: 182679737

GI number: 182679737

Start: 3219228

End: 3220403

Strand: Reverse

Name: ydgJ [C]

Synonym: Bind_2825

Alternate gene names: 182679737

Gene position: 3220403-3219228 (Counterclockwise)

Preceding gene: 182679738

Following gene: 182679736

Centisome position: 77.23

GC content: 60.37

Gene sequence:

>1176_bases
ATGAGTGGCGCGGATGATCTTGCGCGCCGCAGATTGCGCCTCGGCATGGTGGGTGGCGGTGAAGGCGCCTATATCGGCGG
TATCCACCGTTTCGCGACACGGCTCGACAATGCCTTCGAGCTTGTCGCCGGCGCCTTCGATGTCCGGGCGGAACGGGGCC
ACGCTTTCGCCGAAAGCATCTTTGTGGCCAGGGACCGTTCCTATGATGATTTCACGGCGATGGTTGAAGGTGAGAAGAAC
CGGCCAGACCGGATCGATGCCGTGGCTATCTGCACACCAAACCATACGCATTTTCCCATTGCCAAAGCTTTTCTCGAGGC
GGGCTTCGATGTCATCTGCGAAAAGCCAATGACGACGACGCTTGATGACGCGATCGCCCTGCACGAACTTGCCAAGGCGA
CGAACCGTTTCGTCGGGGTGACCTATACTTATTGCGGCTATCCAATGATCCACCAGGCTCAGGCGATGGTGGCGCGAGGC
GATCTCGGTGCTATTCGTGTCGTGCAGGTGGAATATCCCCTCGAATGGATGGCGAGCGCCATTGAAGCGCAAGGCAATGC
GCAGGCAGCCTGGCGGACTGATCCCAAATTGTCCGGGCGCGGTGGCAGTGTCGGCGATATCGGTACTCATGCCTATCATC
TTGCCGGCTTCGTCACCGGACTCAAGGCGCAATCGCTTTGCGCCGATCTTGCGACCTTCGTCCCGGGGCGTCTTCTCGAT
GACAATGCGCATGTCATGATCCGTTATGAAGGCGGCGCGCGCGGCCTTCTCTGGTCGTCCCAGGTGGCCATTGGTTGTTC
CAATGGCCTCCGGCTGCGTGTGTTTGGCGAAAAGGGAAGCCTTTCCTGGTGGCAGGAGGAGCCCAATACGCTTTCCTACA
CGCGGCTCTCCGGCGCGCCGGAAATCATCAAACGGGGACGTGAAGATCTCGATCCTTCCGCCAAAGTCCGCACACGCACG
CCGCCTGGCCATCCGGAAGGGTACATCGCTGCTTTTGCCAATCTCTACGCCGGCTTTGCGGAGGCGATCCGGGCCCGCCG
CGAGACACGCGCGCCATCGGAAATCGGCATGAATGTGCCGACCTCGGCCGATGGGTTGAAGGGGGTCGCTTTTGTCGACG
CTGTCGTCGATAGTCACGAGGCAAAGGGGTGCTGGCTGACGCCAAGGTTCGTCTGA

Upstream 100 bases:

>100_bases
TCATCCATGTCGCCGAACGCGCCTTTGATGATTTCGTCAAGGCGGATGCGAACCGCGCCGCCAACCGGGCCATTCTCGGC
CTTGATGCGGGAGACCTGTC

Downstream 100 bases:

>100_bases
ACCAGGCTGAAAACTTTACGGCAACGATAACGATAACAAATTAAAAAGGGGAAACGACGTGAAAAGACTTTTGTCCGCGT
TAGCGGTGTCTGCGATGACG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSGADDLARRRLRLGMVGGGEGAYIGGIHRFATRLDNAFELVAGAFDVRAERGHAFAESIFVARDRSYDDFTAMVEGEKN
RPDRIDAVAICTPNHTHFPIAKAFLEAGFDVICEKPMTTTLDDAIALHELAKATNRFVGVTYTYCGYPMIHQAQAMVARG
DLGAIRVVQVEYPLEWMASAIEAQGNAQAAWRTDPKLSGRGGSVGDIGTHAYHLAGFVTGLKAQSLCADLATFVPGRLLD
DNAHVMIRYEGGARGLLWSSQVAIGCSNGLRLRVFGEKGSLSWWQEEPNTLSYTRLSGAPEIIKRGREDLDPSAKVRTRT
PPGHPEGYIAAFANLYAGFAEAIRARRETRAPSEIGMNVPTSADGLKGVAFVDAVVDSHEAKGCWLTPRFV

Sequences:

>Translated_391_residues
MSGADDLARRRLRLGMVGGGEGAYIGGIHRFATRLDNAFELVAGAFDVRAERGHAFAESIFVARDRSYDDFTAMVEGEKN
RPDRIDAVAICTPNHTHFPIAKAFLEAGFDVICEKPMTTTLDDAIALHELAKATNRFVGVTYTYCGYPMIHQAQAMVARG
DLGAIRVVQVEYPLEWMASAIEAQGNAQAAWRTDPKLSGRGGSVGDIGTHAYHLAGFVTGLKAQSLCADLATFVPGRLLD
DNAHVMIRYEGGARGLLWSSQVAIGCSNGLRLRVFGEKGSLSWWQEEPNTLSYTRLSGAPEIIKRGREDLDPSAKVRTRT
PPGHPEGYIAAFANLYAGFAEAIRARRETRAPSEIGMNVPTSADGLKGVAFVDAVVDSHEAKGCWLTPRFV
>Mature_390_residues
SGADDLARRRLRLGMVGGGEGAYIGGIHRFATRLDNAFELVAGAFDVRAERGHAFAESIFVARDRSYDDFTAMVEGEKNR
PDRIDAVAICTPNHTHFPIAKAFLEAGFDVICEKPMTTTLDDAIALHELAKATNRFVGVTYTYCGYPMIHQAQAMVARGD
LGAIRVVQVEYPLEWMASAIEAQGNAQAAWRTDPKLSGRGGSVGDIGTHAYHLAGFVTGLKAQSLCADLATFVPGRLLDD
NAHVMIRYEGGARGLLWSSQVAIGCSNGLRLRVFGEKGSLSWWQEEPNTLSYTRLSGAPEIIKRGREDLDPSAKVRTRTP
PGHPEGYIAAFANLYAGFAEAIRARRETRAPSEIGMNVPTSADGLKGVAFVDAVVDSHEAKGCWLTPRFV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=211, Percent_Identity=29.8578199052133, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787574, Length=262, Percent_Identity=27.4809160305344, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42388; Mature: 42257

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGADDLARRRLRLGMVGGGEGAYIGGIHRFATRLDNAFELVAGAFDVRAERGHAFAESI
CCCHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FVARDRSYDDFTAMVEGEKNRPDRIDAVAICTPNHTHFPIAKAFLEAGFDVICEKPMTTT
HEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEECCCCCCC
LDDAIALHELAKATNRFVGVTYTYCGYPMIHQAQAMVARGDLGAIRVVQVEYPLEWMASA
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHH
IEAQGNAQAAWRTDPKLSGRGGSVGDIGTHAYHLAGFVTGLKAQSLCADLATFVPGRLLD
HHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
DNAHVMIRYEGGARGLLWSSQVAIGCSNGLRLRVFGEKGSLSWWQEEPNTLSYTRLSGAP
CCCEEEEEECCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCH
EIIKRGREDLDPSAKVRTRTPPGHPEGYIAAFANLYAGFAEAIRARRETRAPSEIGMNVP
HHHHCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
TSADGLKGVAFVDAVVDSHEAKGCWLTPRFV
CCCCCCCHHHHHHHHHHCCCCCCCEECCCCC
>Mature Secondary Structure 
SGADDLARRRLRLGMVGGGEGAYIGGIHRFATRLDNAFELVAGAFDVRAERGHAFAESI
CCHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FVARDRSYDDFTAMVEGEKNRPDRIDAVAICTPNHTHFPIAKAFLEAGFDVICEKPMTTT
HEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEECCCCCCC
LDDAIALHELAKATNRFVGVTYTYCGYPMIHQAQAMVARGDLGAIRVVQVEYPLEWMASA
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHH
IEAQGNAQAAWRTDPKLSGRGGSVGDIGTHAYHLAGFVTGLKAQSLCADLATFVPGRLLD
HHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
DNAHVMIRYEGGARGLLWSSQVAIGCSNGLRLRVFGEKGSLSWWQEEPNTLSYTRLSGAP
CCCEEEEEECCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCH
EIIKRGREDLDPSAKVRTRTPPGHPEGYIAAFANLYAGFAEAIRARRETRAPSEIGMNVP
HHHHCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
TSADGLKGVAFVDAVVDSHEAKGCWLTPRFV
CCCCCCCHHHHHHHHHHCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]