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The map label for this gene is stbB [H]

Identifier: 182679707

GI number: 182679707

Start: 3182040

End: 3182462

Strand: Reverse

Name: stbB [H]

Synonym: Bind_2795

Alternate gene names: 182679707

Gene position: 3182462-3182040 (Counterclockwise)

Preceding gene: 182679708

Following gene: 182679706

Centisome position: 76.32

GC content: 57.21

Gene sequence:

>423_bases
GTGATTCTTCTTGATACCAGTGTCGTCTCTGAATTGATGAAGGTTGAGCCCGATCCGGCTGTCATCACCTATTTGACGGT
TCAGGCGCCTGAAACGCTTTTCACGGCCGCGATCTGCAAGGCAGAGATCCGTTATGGCCTTGCCCGCATGCCTGCGAGCC
GGAAGCGGGATAATCTGGTGGCCCGGGTCGTGACGTTCTTCGAAACGGGGTTTCGCGATCGGATTTTGTCTTTTGACAGT
TCCTGCGCGGTTTTCTACGCCGAAATTCGCCACGCTCGGGAATTGGCTGGATTGCCCATAGAGGTGGAGGATGCCATGAT
CGCCGCCACGGCTCGAACCTATGGCGCGATTATCGCCACGCGCAGAACAAAGGATTTCATCGGCTGCGGTGTCGCCGTCG
TTGATCCTTGGCGCGGCGCCTGA

Upstream 100 bases:

>100_bases
ATGTGAATGGGGCCGATGTGGATGTTCCACCGCGTGGCAGCGCCTCCAAGAGAGAGCCGGCCGATTTTTCCGATTCCTCC
TACAATCCTCCGGATGCCTC

Downstream 100 bases:

>100_bases
TCCCTTGTTGTGGCAAGAGGTGCCAAGTTCCTCGTATCGAGAATCACAGATTCTCGATCCGTCATTTTTTAAATCGTATC
CACTTGTCCTCATTGAACCC

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MILLDTSVVSELMKVEPDPAVITYLTVQAPETLFTAAICKAEIRYGLARMPASRKRDNLVARVVTFFETGFRDRILSFDS
SCAVFYAEIRHARELAGLPIEVEDAMIAATARTYGAIIATRRTKDFIGCGVAVVDPWRGA

Sequences:

>Translated_140_residues
MILLDTSVVSELMKVEPDPAVITYLTVQAPETLFTAAICKAEIRYGLARMPASRKRDNLVARVVTFFETGFRDRILSFDS
SCAVFYAEIRHARELAGLPIEVEDAMIAATARTYGAIIATRRTKDFIGCGVAVVDPWRGA
>Mature_140_residues
MILLDTSVVSELMKVEPDPAVITYLTVQAPETLFTAAICKAEIRYGLARMPASRKRDNLVARVVTFFETGFRDRILSFDS
SCAVFYAEIRHARELAGLPIEVEDAMIAATARTYGAIIATRRTKDFIGCGVAVVDPWRGA

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15430; Mature: 15430

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLDTSVVSELMKVEPDPAVITYLTVQAPETLFTAAICKAEIRYGLARMPASRKRDNLV
CEEECHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ARVVTFFETGFRDRILSFDSSCAVFYAEIRHARELAGLPIEVEDAMIAATARTYGAIIAT
HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHEEE
RRTKDFIGCGVAVVDPWRGA
CCCCHHHHCCEEEECCCCCC
>Mature Secondary Structure
MILLDTSVVSELMKVEPDPAVITYLTVQAPETLFTAAICKAEIRYGLARMPASRKRDNLV
CEEECHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ARVVTFFETGFRDRILSFDSSCAVFYAEIRHARELAGLPIEVEDAMIAATARTYGAIIAT
HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHEEE
RRTKDFIGCGVAVVDPWRGA
CCCCHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]