| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is chvI [H]
Identifier: 182679656
GI number: 182679656
Start: 3123483
End: 3124178
Strand: Reverse
Name: chvI [H]
Synonym: Bind_2741
Alternate gene names: 182679656
Gene position: 3124178-3123483 (Counterclockwise)
Preceding gene: 182679658
Following gene: 182679655
Centisome position: 74.92
GC content: 52.87
Gene sequence:
>696_bases ATGCCGACCATTGCACTCGTCGATGACGACCGTAATATTCTCACTTCCGTCTCCATCGCTCTGGAAGGCGAAGGCTATCG CGTTCAGACCTATACGGATGGTTCGACCGCGCTCGACGGATTGAAAACGAGCCCTGCCGATCTCGCCATTTTCGACATCA AGATGCCCCGCATGGATGGTATGGAGCTTTTGCGGAGGTTGCGGCAGAAATCGGATATTCCGGTGATCTTCCTCACCTCC AAGGATGACGAGATCGATGAATTATTCGGTCTCAAGATGGGTGCCGACGATTTTATCAAGAAGCCCTTCTCCCAGCGTCT GCTGGTCGAGCGCGTCAAAGCCATTTTGCGCCGTGCCAATCCGAAGGAGGCAGTGCCGCAGAAAGAAAACGAGATCAAGA TTCTCGAGCGCGGCCAGTTGAAGATGGATCCGGAGCGCCATACCTGCACCTGGAAGAATGAGGGGGTAACCCTGACCGTC ACCGAATTTCTGATCCTGCAGGCGTTGGCGACTCGTCCCGGCGTCGTCAAGAGCCGCAATGCCTTGATGGATGCGGCCTA TGATGATCAAGTCTATGTCGATGATCGCACGATCGATAGCCATATCAAAAGGCTACGCAAGAAATTCAAGGCTGTTGATG ACGAATTCGAAATGATCGAGACTCTTTATGGGGTCGGATATCGCTTCAAGGAATGA
Upstream 100 bases:
>100_bases TCCCGTGAACGTGGCATGGCGCAAGTTTTGAGGAAAAGGCCAAGGTTCGCCCGATTGGGCTCATAGGATGAGCCGGCGAC CTCTTCGAATTGGACCCTTC
Downstream 100 bases:
>100_bases GCGATTCCCGGATCGATGATACGGGAGTTGATGGATTGCAGGCCGATGGAAGCGGCTCGATAGAACGAAGGAGCGATGAG TCTCGAAGCGAGGGATAATC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPTIALVDDDRNILTSVSIALEGEGYRVQTYTDGSTALDGLKTSPADLAIFDIKMPRMDGMELLRRLRQKSDIPVIFLTS KDDEIDELFGLKMGADDFIKKPFSQRLLVERVKAILRRANPKEAVPQKENEIKILERGQLKMDPERHTCTWKNEGVTLTV TEFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKE
Sequences:
>Translated_231_residues MPTIALVDDDRNILTSVSIALEGEGYRVQTYTDGSTALDGLKTSPADLAIFDIKMPRMDGMELLRRLRQKSDIPVIFLTS KDDEIDELFGLKMGADDFIKKPFSQRLLVERVKAILRRANPKEAVPQKENEIKILERGQLKMDPERHTCTWKNEGVTLTV TEFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKE >Mature_230_residues PTIALVDDDRNILTSVSIALEGEGYRVQTYTDGSTALDGLKTSPADLAIFDIKMPRMDGMELLRRLRQKSDIPVIFLTSK DDEIDELFGLKMGADDFIKKPFSQRLLVERVKAILRRANPKEAVPQKENEIKILERGQLKMDPERHTCTWKNEGVTLTVT EFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKE
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=39.7379912663755, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=35.3711790393013, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=36.0869565217391, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=39.2070484581498, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=33.6206896551724, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=32.8947368421053, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=31.4410480349345, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI87082012, Length=231, Percent_Identity=35.4978354978355, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=32.6086956521739, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=31.5555555555556, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=28.5087719298246, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=29.6943231441048, Blast_Score=94, Evalue=5e-21, Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=31.5126050420168, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=29.5154185022026, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=34.6534653465347, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788550, Length=101, Percent_Identity=32.6732673267327, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26430; Mature: 26299
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIALVDDDRNILTSVSIALEGEGYRVQTYTDGSTALDGLKTSPADLAIFDIKMPRMDG CCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCEEEEEEECCCCCH MELLRRLRQKSDIPVIFLTSKDDEIDELFGLKMGADDFIKKPFSQRLLVERVKAILRRAN HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCC PKEAVPQKENEIKILERGQLKMDPERHTCTWKNEGVTLTVTEFLILQALATRPGVVKSRN CCCCCCCCCCCEEEEECCCEEECCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCHHCCH ALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKE HHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PTIALVDDDRNILTSVSIALEGEGYRVQTYTDGSTALDGLKTSPADLAIFDIKMPRMDG CEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCEEEEEEECCCCCH MELLRRLRQKSDIPVIFLTSKDDEIDELFGLKMGADDFIKKPFSQRLLVERVKAILRRAN HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCC PKEAVPQKENEIKILERGQLKMDPERHTCTWKNEGVTLTVTEFLILQALATRPGVVKSRN CCCCCCCCCCCEEEEECCCEEECCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCHHCCH ALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKE HHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]