| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679643
Identifier: 182679643
GI number: 182679643
Start: 3108285
End: 3110543
Strand: Reverse
Name: 182679643
Synonym: Bind_2728
Alternate gene names: NA
Gene position: 3110543-3108285 (Counterclockwise)
Preceding gene: 182679644
Following gene: 182679642
Centisome position: 74.59
GC content: 55.87
Gene sequence:
>2259_bases ATGGGTCGGCAAAATTATGTCAATGGCGTGCATCTGCTGCCGGCTACGGGCGAGTTCAGTTATGATACGCTGCCACGTTT CGGCCAGCGCATCGACGAGGCCGGGTTTTCGCCGCTCAATCTGTTTCACGGCGGTATCCCAGGCAAGACGGATTTCTCCA CATCCATCGACCAGCTTCAGGCGGCTTTTCCTGAGTGTACGACCGTCTCGCTGATCGTGGCCTGGTTTGGCAGTTCGGTC GATGCCGCGTCCTGCCGGATCTATCCATCAACGACCTATATCGGCGGAGCTTTTCAGGATGAATCGGGCCACGCCGATGC CTGGTATTGCTCCGGCCTGACACAGATTTCGAACGGCCTGATCCCGCTGCCGCGCTCGGGCTCTTCCTTTGTCTATGGCG GTACTCCATCCGATCCATCGATCGTCCGCGCGATCCGCGATCTCAAGGCGCGCGGTTTACGCGTGGTCTTTTATCCCTTT ATTTTAATGACATCCGCAGGCTTTCCCTGGCGAGGGCGTATCACTTTCGCAGCCGACCGCTCGGAGGAAGCGACTACGGC AGTGACAACCTTTCTCGGTTCCGCGACAGTTGATCAGTTTACACCGGATACAGACAATCTGACTGTCGGCTATTCCGGTG CGCCGGCTGATTACAGTTTTCGCCGCATGATCTTGCATTATGCATCGCTTTGCGCTTCGGCAGGCGGCGTCGATCTGTTT CTGATCGGCTCGGAATTGCGCGGTCTCGAACAAATTCGCGGGCCTCATTGGAGCACGGCCGGGACCGTCGATGGCAATGG CTGTGCGGTTTGGGACTATCCCTTCGTTGATGGGCTCATGGCACTTGCATCCGATGTGCGCGCCATTTTTGATAGCGCTG GTTTGATGCGGGATCGCGCAGGATTACACAATCTCATCACCTACTCCGCCGATTGGTCGGTCTGGATGGGTGTGCAACAT GCTGATTCCAATGGGCAATGGCCGCATCTAGACCGGCTCTATGACCATGATGCCATCGATCTCGTGGCTTTCGACAATTA TCTGCCCCTGTCCGATTGGACGAGCGGGACAGGTGGCCTCGATCTCCTCCATTGGAGTGACCCACGTGGGCAGACATGGC CGCCTTCAGCCGATGAGATGAATGCGCTTGGCTTGTCGGGAACACCGATGCTCAAGAGCAAGGCCTATCTCAAGGCCAAT ATCGAGGGCGGCGAGAAATATCACTGGTTTTATTACGATAGCGATAATCTTGGCCGTGGCCTCGACCCAAACGGGACGGG CGCGCAAGTTTCGCGGCCTGCGGGGGATCGCCTGACGCAGACACGTCATCCCTATTTTGCTGATCAGCACTTGTTGGCCA ATAAACATCTGCGTTGGTGGTGGAATAATCCGCATCAGGCTGTCTATGACGCCGGCGATGGTGCGGGGTTTGTGCCGCAT GGGCCGAGGACACAATGGGGGGAACAATCGAAATCGATTATTTTTACCGAATACGGTTTTCCGACCTGCGATCGCGGCAC CAATCAGCCGAATGTGTTCTACGATCCGAAATCGAGTGAAAGTTTCACGCCTTACTGGTCGATCTGGGAGTCCATGGATG GGGCTGCCTATCGGCCCGTGCAAGATGACGAATTGGTGCTGCTCGCTCTCCAAGCGATCCATGAATATTGGTTCGAGGAG GGCAATAACGAGACATCGCCCAATGGCTTGACGATGATCGAGCCGACTTTTTGCTCCATATGGTCGTGGGATGCGCGGCC GTTTCCGGTGTTTCCGAACCGTGCCGATCTCTGGGGTGATGCAAGCAATTGGCGGGCAGGCAATTGGCTCAATGGCAAGG GGCCTTTTCTCATGCCTCCCGTTTTGGACGAGCCGCCGATTTCTGGCTCTTTCCCCGTGTTTCCGACACTGAAAGGTCAA GGCTGGTCGATCCATTATCAACCGCTCTTCGACACATTGGCCACCCTACACGCGTCGGGACGTGAAAGCCGTGCGGCGCG GCGCGCAAATGCTCAATTCGAGATCGATCTGACTTTCGATCATTTGGGAATGGAGGCCGAGGCGGATTTTCAGACACTCG CTGGCTTCTATCTCAGCATGCAGGGAACCCATGGCCTTTTCACTTTTCCGATGCCGGACGAATGGGGCTTAGGACCGAGC CTGCTTTGTCGTTTCGCCGATGATGTTCAGGATTTCGAAGAATTCATGATGCGGTTCTGGACGGTGCAAAGCTTGAAATT ACAGACGGTGAGACCTTGA
Upstream 100 bases:
>100_bases TTGCGCTTTCCGTGGCGCGGTGCGGCTCTTGTAAGAAACAACTAAATACCTGAATTCTCAGATCCATCATTCACTGGCGC AAGCCACAGCGGATTTGCGA
Downstream 100 bases:
>100_bases GAAACCAAAAGAAGACGAAGGTATGGAGGAGGTCATGAGTCTTCCGGTTTTCCCGCAACTTCCCGGCCAGGGATGGTCCG TACACAAAAGACCGACCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Gene Transfer Agent Like Protein; Gene Transfer Agent Orfg; Phage Hocificity Protein; Gene Transfer Agent Protein; Gene Transfer Agent-Like Protein; Gene Transfer Agent Product
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MGRQNYVNGVHLLPATGEFSYDTLPRFGQRIDEAGFSPLNLFHGGIPGKTDFSTSIDQLQAAFPECTTVSLIVAWFGSSV DAASCRIYPSTTYIGGAFQDESGHADAWYCSGLTQISNGLIPLPRSGSSFVYGGTPSDPSIVRAIRDLKARGLRVVFYPF ILMTSAGFPWRGRITFAADRSEEATTAVTTFLGSATVDQFTPDTDNLTVGYSGAPADYSFRRMILHYASLCASAGGVDLF LIGSELRGLEQIRGPHWSTAGTVDGNGCAVWDYPFVDGLMALASDVRAIFDSAGLMRDRAGLHNLITYSADWSVWMGVQH ADSNGQWPHLDRLYDHDAIDLVAFDNYLPLSDWTSGTGGLDLLHWSDPRGQTWPPSADEMNALGLSGTPMLKSKAYLKAN IEGGEKYHWFYYDSDNLGRGLDPNGTGAQVSRPAGDRLTQTRHPYFADQHLLANKHLRWWWNNPHQAVYDAGDGAGFVPH GPRTQWGEQSKSIIFTEYGFPTCDRGTNQPNVFYDPKSSESFTPYWSIWESMDGAAYRPVQDDELVLLALQAIHEYWFEE GNNETSPNGLTMIEPTFCSIWSWDARPFPVFPNRADLWGDASNWRAGNWLNGKGPFLMPPVLDEPPISGSFPVFPTLKGQ GWSIHYQPLFDTLATLHASGRESRAARRANAQFEIDLTFDHLGMEAEADFQTLAGFYLSMQGTHGLFTFPMPDEWGLGPS LLCRFADDVQDFEEFMMRFWTVQSLKLQTVRP
Sequences:
>Translated_752_residues MGRQNYVNGVHLLPATGEFSYDTLPRFGQRIDEAGFSPLNLFHGGIPGKTDFSTSIDQLQAAFPECTTVSLIVAWFGSSV DAASCRIYPSTTYIGGAFQDESGHADAWYCSGLTQISNGLIPLPRSGSSFVYGGTPSDPSIVRAIRDLKARGLRVVFYPF ILMTSAGFPWRGRITFAADRSEEATTAVTTFLGSATVDQFTPDTDNLTVGYSGAPADYSFRRMILHYASLCASAGGVDLF LIGSELRGLEQIRGPHWSTAGTVDGNGCAVWDYPFVDGLMALASDVRAIFDSAGLMRDRAGLHNLITYSADWSVWMGVQH ADSNGQWPHLDRLYDHDAIDLVAFDNYLPLSDWTSGTGGLDLLHWSDPRGQTWPPSADEMNALGLSGTPMLKSKAYLKAN IEGGEKYHWFYYDSDNLGRGLDPNGTGAQVSRPAGDRLTQTRHPYFADQHLLANKHLRWWWNNPHQAVYDAGDGAGFVPH GPRTQWGEQSKSIIFTEYGFPTCDRGTNQPNVFYDPKSSESFTPYWSIWESMDGAAYRPVQDDELVLLALQAIHEYWFEE GNNETSPNGLTMIEPTFCSIWSWDARPFPVFPNRADLWGDASNWRAGNWLNGKGPFLMPPVLDEPPISGSFPVFPTLKGQ GWSIHYQPLFDTLATLHASGRESRAARRANAQFEIDLTFDHLGMEAEADFQTLAGFYLSMQGTHGLFTFPMPDEWGLGPS LLCRFADDVQDFEEFMMRFWTVQSLKLQTVRP >Mature_751_residues GRQNYVNGVHLLPATGEFSYDTLPRFGQRIDEAGFSPLNLFHGGIPGKTDFSTSIDQLQAAFPECTTVSLIVAWFGSSVD AASCRIYPSTTYIGGAFQDESGHADAWYCSGLTQISNGLIPLPRSGSSFVYGGTPSDPSIVRAIRDLKARGLRVVFYPFI LMTSAGFPWRGRITFAADRSEEATTAVTTFLGSATVDQFTPDTDNLTVGYSGAPADYSFRRMILHYASLCASAGGVDLFL IGSELRGLEQIRGPHWSTAGTVDGNGCAVWDYPFVDGLMALASDVRAIFDSAGLMRDRAGLHNLITYSADWSVWMGVQHA DSNGQWPHLDRLYDHDAIDLVAFDNYLPLSDWTSGTGGLDLLHWSDPRGQTWPPSADEMNALGLSGTPMLKSKAYLKANI EGGEKYHWFYYDSDNLGRGLDPNGTGAQVSRPAGDRLTQTRHPYFADQHLLANKHLRWWWNNPHQAVYDAGDGAGFVPHG PRTQWGEQSKSIIFTEYGFPTCDRGTNQPNVFYDPKSSESFTPYWSIWESMDGAAYRPVQDDELVLLALQAIHEYWFEEG NNETSPNGLTMIEPTFCSIWSWDARPFPVFPNRADLWGDASNWRAGNWLNGKGPFLMPPVLDEPPISGSFPVFPTLKGQG WSIHYQPLFDTLATLHASGRESRAARRANAQFEIDLTFDHLGMEAEADFQTLAGFYLSMQGTHGLFTFPMPDEWGLGPSL LCRFADDVQDFEEFMMRFWTVQSLKLQTVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83476; Mature: 83344
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQNYVNGVHLLPATGEFSYDTLPRFGQRIDEAGFSPLNLFHGGIPGKTDFSTSIDQLQ CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHH AAFPECTTVSLIVAWFGSSVDAASCRIYPSTTYIGGAFQDESGHADAWYCSGLTQISNGL HHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEECCEEECCCCCCCEEEECCHHHHHCCC IPLPRSGSSFVYGGTPSDPSIVRAIRDLKARGLRVVFYPFILMTSAGFPWRGRITFAADR EECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCEEEEEECC SEEATTAVTTFLGSATVDQFTPDTDNLTVGYSGAPADYSFRRMILHYASLCASAGGVDLF CCHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEE LIGSELRGLEQIRGPHWSTAGTVDGNGCAVWDYPFVDGLMALASDVRAIFDSAGLMRDRA EECHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHC GLHNLITYSADWSVWMGVQHADSNGQWPHLDRLYDHDAIDLVAFDNYLPLSDWTSGTGGL CHHHEEEECCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCE DLLHWSDPRGQTWPPSADEMNALGLSGTPMLKSKAYLKANIEGGEKYHWFYYDSDNLGRG EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC LDPNGTGAQVSRPAGDRLTQTRHPYFADQHLLANKHLRWWWNNPHQAVYDAGDGAGFVPH CCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCC GPRTQWGEQSKSIIFTEYGFPTCDRGTNQPNVFYDPKSSESFTPYWSIWESMDGAAYRPV CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEECCC QDDELVLLALQAIHEYWFEEGNNETSPNGLTMIEPTFCSIWSWDARPFPVFPNRADLWGD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCC ASNWRAGNWLNGKGPFLMPPVLDEPPISGSFPVFPTLKGQGWSIHYQPLFDTLATLHASG CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHCCC RESRAARRANAQFEIDLTFDHLGMEAEADFQTLAGFYLSMQGTHGLFTFPMPDEWGLGPS CHHHHHHHCCCEEEEEEEHHHCCCCCCCCHHHHHEEEEEECCCCCEEECCCCCCCCCCHH LLCRFADDVQDFEEFMMRFWTVQSLKLQTVRP HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure GRQNYVNGVHLLPATGEFSYDTLPRFGQRIDEAGFSPLNLFHGGIPGKTDFSTSIDQLQ CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHH AAFPECTTVSLIVAWFGSSVDAASCRIYPSTTYIGGAFQDESGHADAWYCSGLTQISNGL HHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEECCEEECCCCCCCEEEECCHHHHHCCC IPLPRSGSSFVYGGTPSDPSIVRAIRDLKARGLRVVFYPFILMTSAGFPWRGRITFAADR EECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCEEEEEECC SEEATTAVTTFLGSATVDQFTPDTDNLTVGYSGAPADYSFRRMILHYASLCASAGGVDLF CCHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEE LIGSELRGLEQIRGPHWSTAGTVDGNGCAVWDYPFVDGLMALASDVRAIFDSAGLMRDRA EECHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHC GLHNLITYSADWSVWMGVQHADSNGQWPHLDRLYDHDAIDLVAFDNYLPLSDWTSGTGGL CHHHEEEECCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCE DLLHWSDPRGQTWPPSADEMNALGLSGTPMLKSKAYLKANIEGGEKYHWFYYDSDNLGRG EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC LDPNGTGAQVSRPAGDRLTQTRHPYFADQHLLANKHLRWWWNNPHQAVYDAGDGAGFVPH CCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCC GPRTQWGEQSKSIIFTEYGFPTCDRGTNQPNVFYDPKSSESFTPYWSIWESMDGAAYRPV CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEECCC QDDELVLLALQAIHEYWFEEGNNETSPNGLTMIEPTFCSIWSWDARPFPVFPNRADLWGD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCC ASNWRAGNWLNGKGPFLMPPVLDEPPISGSFPVFPTLKGQGWSIHYQPLFDTLATLHASG CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHCCC RESRAARRANAQFEIDLTFDHLGMEAEADFQTLAGFYLSMQGTHGLFTFPMPDEWGLGPS CHHHHHHHCCCEEEEEEEHHHCCCCCCCCHHHHHEEEEEECCCCCEEECCCCCCCCCCHH LLCRFADDVQDFEEFMMRFWTVQSLKLQTVRP HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA