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The map label for this gene is lppB [H]

Identifier: 182679614

GI number: 182679614

Start: 3076910

End: 3078412

Strand: Reverse

Name: lppB [H]

Synonym: Bind_2699

Alternate gene names: 182679614

Gene position: 3078412-3076910 (Counterclockwise)

Preceding gene: 182679615

Following gene: 182679613

Centisome position: 73.82

GC content: 62.61

Gene sequence:

>1503_bases
ATGCGTTTTTCCTTTTCGTTGCGTGGATCGCGCGCCGCTACATCATGCTTGGCGCTTCGCCTTGCCCTGACTGGAGCTAC
GGCGGGCTTGCTCGCCGGTTGCGCCAATTCCGAACGTCTGTCGGATCCTTTCGGCAATCCGTTTCAGAGCAGTGCGAATG
GTACTGATTCCACGCCGACGGGAAGTCTCGGATCCTATCAGCAGTCTGCGCCCGTGACGCCAGTCCAGCGCCACGCTTTG
GGACAGGCGATCCCGCAGCCGGCTGCACCCCCTGTGCAGACGCGCTCACTGACCGCCGCAACGGTTCCGGTCGCCCCTTC
CTTGCCACGTGGCGCGGGCGGCGCCGCGGGCTGGACCATCGAAGGCGGTACCCCGATTGCTGTCAGGCCAGGCGAAAGCG
CGTCAGTGCTGGCCCAGCGTTATGGCGTGCCGACCGAGAGCCTGGTGCGAGCCAATGGCTTTGGCTCCGCTGGCGAGATC
CAGCCGGGCACGCGCGTTGTCATTCCTGTTTATAACGCGGCGCTGGCGGCATCGAGTGGCGCCCATCTCGTCCAGAATAC
GGAGCAGGCGGTGAGCCGGACGGCCACGGCCGCCCAAAATCTGCCGACCCGCTTGCCGACGATCCCGAAGCCGACGCCCA
TCGCCCAGGCCGAACCGGTGAAACTCGTCCGGAACGTGGCACAGAACACGACGAAATCGGTCGTTGCCGAGACCAATGCC
GTGAAGGGCGCGGCGCGTGCCAAGCTCGTGCAAGGCCATGCGCAGGAGCAAGCCGTCGTGCAACATGTGCAAACGGCGCA
GGCGACGGTCAAATCCCAGGTCAAGCCCGAAGCCATAGCCAAGAATGTGGCGAAAGCCGAGCATCTGGCTAAACCGGAAC
CCATTGCCAAGGCGGAAGCCACGGTCAAGGCCACGGCAGGCAAACTGGAGCATGCTCAGGTCGAAACGAAAAAGGCCGTG
AAAACCGCCGCGCTCGCGCCTGCCCGTGAAGCCAGGATTGCGGAAAGCAAACCGGTGGAAGCACGAGCCGTGGAGCCGAA
ACAAACGCGCTCCGAAGTGAAACAGGCGGAACCCGTCAAAAGCGCAGAACCCGTCGCTGTCGAGCCAGCCAGGGAAGCCG
CGAACGATAGCGCCAATCCAGAATTCCGCTGGCCGGCGCGTGGCCGCATCATCCAATCCTTCAAGCCTGGCGGCAATGAT
GGCATCAATATAGCGGTGCCCGAAGGCACGGCGGTCAAAGCCGCCGAAGGGGGCGTCGTCGCCTATGCTGGCAGTGAATT
GAAGGGCTATGGCAATCTGGTGCTGATCCGTCATCCCAATGGCTTCGTTTCCGCTTATGCGAATAACGGCGATCTCGAGG
TCAAACGGGGTGAGACGGTCAAGCGCGGCCAGACGATCGCAAAATCCGGACAGAGCGGCAATGTCAACTCACCGCAATTG
CATTTCGAATTACGCAAGGGCGCGACACCGGTTGATCCGACACAATATCTCGCGGGCCTGTGA

Upstream 100 bases:

>100_bases
ATTTTGCGGCCTTTTTTCTGAGAAATCGTTCACCTTAAACGCTCCTTTAACCCACTGCCGCGTTAATGATTGTCACTGAC
ACCGCCTTGTGGGTTGCGTT

Downstream 100 bases:

>100_bases
ACGCCCAGAACATCAGACCCAAAAAGGCTCCCACTTTTGGGACCAATCTGATGCGTTTTCAGAATGGTAGAGCATCGGAC
ATAATGCAATTTGCAAGTCC

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MRFSFSLRGSRAATSCLALRLALTGATAGLLAGCANSERLSDPFGNPFQSSANGTDSTPTGSLGSYQQSAPVTPVQRHAL
GQAIPQPAAPPVQTRSLTAATVPVAPSLPRGAGGAAGWTIEGGTPIAVRPGESASVLAQRYGVPTESLVRANGFGSAGEI
QPGTRVVIPVYNAALAASSGAHLVQNTEQAVSRTATAAQNLPTRLPTIPKPTPIAQAEPVKLVRNVAQNTTKSVVAETNA
VKGAARAKLVQGHAQEQAVVQHVQTAQATVKSQVKPEAIAKNVAKAEHLAKPEPIAKAEATVKATAGKLEHAQVETKKAV
KTAALAPAREARIAESKPVEARAVEPKQTRSEVKQAEPVKSAEPVAVEPAREAANDSANPEFRWPARGRIIQSFKPGGND
GINIAVPEGTAVKAAEGGVVAYAGSELKGYGNLVLIRHPNGFVSAYANNGDLEVKRGETVKRGQTIAKSGQSGNVNSPQL
HFELRKGATPVDPTQYLAGL

Sequences:

>Translated_500_residues
MRFSFSLRGSRAATSCLALRLALTGATAGLLAGCANSERLSDPFGNPFQSSANGTDSTPTGSLGSYQQSAPVTPVQRHAL
GQAIPQPAAPPVQTRSLTAATVPVAPSLPRGAGGAAGWTIEGGTPIAVRPGESASVLAQRYGVPTESLVRANGFGSAGEI
QPGTRVVIPVYNAALAASSGAHLVQNTEQAVSRTATAAQNLPTRLPTIPKPTPIAQAEPVKLVRNVAQNTTKSVVAETNA
VKGAARAKLVQGHAQEQAVVQHVQTAQATVKSQVKPEAIAKNVAKAEHLAKPEPIAKAEATVKATAGKLEHAQVETKKAV
KTAALAPAREARIAESKPVEARAVEPKQTRSEVKQAEPVKSAEPVAVEPAREAANDSANPEFRWPARGRIIQSFKPGGND
GINIAVPEGTAVKAAEGGVVAYAGSELKGYGNLVLIRHPNGFVSAYANNGDLEVKRGETVKRGQTIAKSGQSGNVNSPQL
HFELRKGATPVDPTQYLAGL
>Mature_500_residues
MRFSFSLRGSRAATSCLALRLALTGATAGLLAGCANSERLSDPFGNPFQSSANGTDSTPTGSLGSYQQSAPVTPVQRHAL
GQAIPQPAAPPVQTRSLTAATVPVAPSLPRGAGGAAGWTIEGGTPIAVRPGESASVLAQRYGVPTESLVRANGFGSAGEI
QPGTRVVIPVYNAALAASSGAHLVQNTEQAVSRTATAAQNLPTRLPTIPKPTPIAQAEPVKLVRNVAQNTTKSVVAETNA
VKGAARAKLVQGHAQEQAVVQHVQTAQATVKSQVKPEAIAKNVAKAEHLAKPEPIAKAEATVKATAGKLEHAQVETKKAV
KTAALAPAREARIAESKPVEARAVEPKQTRSEVKQAEPVKSAEPVAVEPAREAANDSANPEFRWPARGRIIQSFKPGGND
GINIAVPEGTAVKAAEGGVVAYAGSELKGYGNLVLIRHPNGFVSAYANNGDLEVKRGETVKRGQTIAKSGQSGNVNSPQL
HFELRKGATPVDPTQYLAGL

Specific function: May be a virulence determinant [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=44.0677966101695, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=44.9152542372881, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87082297, Length=119, Percent_Identity=36.9747899159664, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 51602; Mature: 51602

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSFSLRGSRAATSCLALRLALTGATAGLLAGCANSERLSDPFGNPFQSSANGTDSTPT
CCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSLGSYQQSAPVTPVQRHALGQAIPQPAAPPVQTRSLTAATVPVAPSLPRGAGGAAGWTI
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
EGGTPIAVRPGESASVLAQRYGVPTESLVRANGFGSAGEIQPGTRVVIPVYNAALAASSG
CCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHCCCC
AHLVQNTEQAVSRTATAAQNLPTRLPTIPKPTPIAQAEPVKLVRNVAQNTTKSVVAETNA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VKGAARAKLVQGHAQEQAVVQHVQTAQATVKSQVKPEAIAKNVAKAEHLAKPEPIAKAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
TVKATAGKLEHAQVETKKAVKTAALAPAREARIAESKPVEARAVEPKQTRSEVKQAEPVK
EHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
SAEPVAVEPAREAANDSANPEFRWPARGRIIQSFKPGGNDGINIAVPEGTAVKAAEGGVV
CCCCCEECCHHHHCCCCCCCCEECCCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCEE
AYAGSELKGYGNLVLIRHPNGFVSAYANNGDLEVKRGETVKRGQTIAKSGQSGNVNSPQL
EEECCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCHHHCCHHHHCCCCCCCCCCEE
HFELRKGATPVDPTQYLAGL
EEEEECCCCCCCHHHHHHCC
>Mature Secondary Structure
MRFSFSLRGSRAATSCLALRLALTGATAGLLAGCANSERLSDPFGNPFQSSANGTDSTPT
CCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSLGSYQQSAPVTPVQRHALGQAIPQPAAPPVQTRSLTAATVPVAPSLPRGAGGAAGWTI
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
EGGTPIAVRPGESASVLAQRYGVPTESLVRANGFGSAGEIQPGTRVVIPVYNAALAASSG
CCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHCCCC
AHLVQNTEQAVSRTATAAQNLPTRLPTIPKPTPIAQAEPVKLVRNVAQNTTKSVVAETNA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VKGAARAKLVQGHAQEQAVVQHVQTAQATVKSQVKPEAIAKNVAKAEHLAKPEPIAKAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
TVKATAGKLEHAQVETKKAVKTAALAPAREARIAESKPVEARAVEPKQTRSEVKQAEPVK
EHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
SAEPVAVEPAREAANDSANPEFRWPARGRIIQSFKPGGNDGINIAVPEGTAVKAAEGGVV
CCCCCEECCHHHHCCCCCCCCEECCCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCEE
AYAGSELKGYGNLVLIRHPNGFVSAYANNGDLEVKRGETVKRGQTIAKSGQSGNVNSPQL
EEECCCCCCCCCEEEEECCCCEEEEEECCCCEEEECCCCHHHCCHHHHCCCCCCCCCCEE
HFELRKGATPVDPTQYLAGL
EEEEECCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]