| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679574
Identifier: 182679574
GI number: 182679574
Start: 3020464
End: 3021906
Strand: Reverse
Name: 182679574
Synonym: Bind_2653
Alternate gene names: NA
Gene position: 3021906-3020464 (Counterclockwise)
Preceding gene: 182679576
Following gene: 182679569
Centisome position: 72.47
GC content: 44.14
Gene sequence:
>1443_bases ATGTTTAGGTCAACTCTCCTGTATCTGCCTGCTCAACTTACGGGTCCTTTGCTTCAGTTTCTTTCGGTTGTCATTTGGGC TCAGACACTATCACCAGCTGAAGTTGGCGTTGTCACACTCATCATTGCGTTGCAAGAGATATTATTCGCGGCATTGCTAA TGTGGTGGTCACATTATATGCTTCGCAACATAAGAAAGTTCTCTCTAAACAACAGCCGATCTACATTCCTAAAAACGGAA CTATTTGCGGTTGCAGTCTCTGTTTTTATGCAAATCGTCGTATCAATCACGATTATTGCAGTTTATTTTGATAAAAATAT AATTATACCAAGCTATTATATAATTGTGGCCTTTATGATTTCCCGCTCTATGTCGAATTATATTTCTGAACGTGCCCGTG CGGAGTCAATGATTAGCTTATATAGCATAATGCAGATATTGAGTCCCGGCCTTGGTCTATTCATATCCATGGTTTTTCTA AAATTCTGGCAAGCAAATGCCGCTGCAGTGCTGCTTGGCTTTACTATCGCTCAGTTTGTTTCTTTAGCCATTGGCTTTGT GATCTGCGACTTCGGCCGTGCAGTACCATATCTAGACAAGCAAATCCTTATCCAAGCATTAAAGTTCGGCATACCGGTAA TGATAGCTTCGACAATTGCTCTTGTAGCGTTGAATGCACCTCGCTTTATCGTTGATCATCTTGTCGGGATCGAAGCCGCG GGCGTATTCGCTATTGGCTATAGCCTGGGACTCCGGGCTTCCAATTTCGCCGTTATGCTTGTAACTGCAGGGGCTTATCC GCTAGTCGTCAAAAAGATGGTGGAGGAGGGTTTGGAATCCGCTTATGAACAGCTACGCAAAAACATTATATTGGTAACCA TAGTTGTATGTCCCGTCGCTGCCGGTTTGATTGCAATCAATCATGACCTCATCATGTTGATTGTTGGCAAACAGTTTCAA GAAGCTACCTTTCAAGTCCTTCCTTTCACAGCACTAGCAGGCCTCTTCCGCTATCTTAGAGGACATACCACAGATCAGGT TTTCTTGATTAATTCAAAACCAATCTACACAACGATCATCTCTGTTCTAGATCTCGCGATGGCCTTGGTATCAGCCTTTA TTGGCGTCTATCTCTTTGGTCTGGTAGGCGGCGCTTTAGGACCTATGGTATCGGGATTTACTACACTGATCGTCAGCTTC CTGCTCTGCAAAGGTTTTGGTTTTCGACCTCCCGTCTCAGCTATGAGCTTGGCGTGTGTATCAGCTGCTCTAATGGCGCT ACCCATCTATTATCTGCCGCATACTGTCAACTGGTTACTCTTGGCAATTAAAGTCATCACGGGTGCTGCTATTTACGTGC TTCTCATAGCTTTGCTAATGCCTTCAGAACGGAAAACCATTCTTTCGCTTGTTAGGGGCAGAAGATTTGTAGCGGCAGCT TAG
Upstream 100 bases:
>100_bases TTCGAAAAAACATTATGCAGCGCAAGGCAATAAGGGATATACATAATCTGTATTCCACTGTCTTGTTAGACATTTGGCCC CGCAGCTCAGGATTATATTC
Downstream 100 bases:
>100_bases GGCGCGGACTCATAAACTCTGGCACCAAATCCTCGTCGCGACGAGTTTGACAGCGGCGAGGAAGTTGACCGGGTCTTCGT CGTAGCGCGCTGCGATGCCA
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Export Protein
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MFRSTLLYLPAQLTGPLLQFLSVVIWAQTLSPAEVGVVTLIIALQEILFAALLMWWSHYMLRNIRKFSLNNSRSTFLKTE LFAVAVSVFMQIVVSITIIAVYFDKNIIIPSYYIIVAFMISRSMSNYISERARAESMISLYSIMQILSPGLGLFISMVFL KFWQANAAAVLLGFTIAQFVSLAIGFVICDFGRAVPYLDKQILIQALKFGIPVMIASTIALVALNAPRFIVDHLVGIEAA GVFAIGYSLGLRASNFAVMLVTAGAYPLVVKKMVEEGLESAYEQLRKNIILVTIVVCPVAAGLIAINHDLIMLIVGKQFQ EATFQVLPFTALAGLFRYLRGHTTDQVFLINSKPIYTTIISVLDLAMALVSAFIGVYLFGLVGGALGPMVSGFTTLIVSF LLCKGFGFRPPVSAMSLACVSAALMALPIYYLPHTVNWLLLAIKVITGAAIYVLLIALLMPSERKTILSLVRGRRFVAAA
Sequences:
>Translated_480_residues MFRSTLLYLPAQLTGPLLQFLSVVIWAQTLSPAEVGVVTLIIALQEILFAALLMWWSHYMLRNIRKFSLNNSRSTFLKTE LFAVAVSVFMQIVVSITIIAVYFDKNIIIPSYYIIVAFMISRSMSNYISERARAESMISLYSIMQILSPGLGLFISMVFL KFWQANAAAVLLGFTIAQFVSLAIGFVICDFGRAVPYLDKQILIQALKFGIPVMIASTIALVALNAPRFIVDHLVGIEAA GVFAIGYSLGLRASNFAVMLVTAGAYPLVVKKMVEEGLESAYEQLRKNIILVTIVVCPVAAGLIAINHDLIMLIVGKQFQ EATFQVLPFTALAGLFRYLRGHTTDQVFLINSKPIYTTIISVLDLAMALVSAFIGVYLFGLVGGALGPMVSGFTTLIVSF LLCKGFGFRPPVSAMSLACVSAALMALPIYYLPHTVNWLLLAIKVITGAAIYVLLIALLMPSERKTILSLVRGRRFVAAA >Mature_480_residues MFRSTLLYLPAQLTGPLLQFLSVVIWAQTLSPAEVGVVTLIIALQEILFAALLMWWSHYMLRNIRKFSLNNSRSTFLKTE LFAVAVSVFMQIVVSITIIAVYFDKNIIIPSYYIIVAFMISRSMSNYISERARAESMISLYSIMQILSPGLGLFISMVFL KFWQANAAAVLLGFTIAQFVSLAIGFVICDFGRAVPYLDKQILIQALKFGIPVMIASTIALVALNAPRFIVDHLVGIEAA GVFAIGYSLGLRASNFAVMLVTAGAYPLVVKKMVEEGLESAYEQLRKNIILVTIVVCPVAAGLIAINHDLIMLIVGKQFQ EATFQVLPFTALAGLFRYLRGHTTDQVFLINSKPIYTTIISVLDLAMALVSAFIGVYLFGLVGGALGPMVSGFTTLIVSF LLCKGFGFRPPVSAMSLACVSAALMALPIYYLPHTVNWLLLAIKVITGAAIYVLLIALLMPSERKTILSLVRGRRFVAAA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52526; Mature: 52526
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSTLLYLPAQLTGPLLQFLSVVIWAQTLSPAEVGVVTLIIALQEILFAALLMWWSHYM CCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRNIRKFSLNNSRSTFLKTELFAVAVSVFMQIVVSITIIAVYFDKNIIIPSYYIIVAFMI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SRSMSNYISERARAESMISLYSIMQILSPGLGLFISMVFLKFWQANAAAVLLGFTIAQFV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SLAIGFVICDFGRAVPYLDKQILIQALKFGIPVMIASTIALVALNAPRFIVDHLVGIEAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVFAIGYSLGLRASNFAVMLVTAGAYPLVVKKMVEEGLESAYEQLRKNIILVTIVVCPVA HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AGLIAINHDLIMLIVGKQFQEATFQVLPFTALAGLFRYLRGHTTDQVFLINSKPIYTTII HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH SVLDLAMALVSAFIGVYLFGLVGGALGPMVSGFTTLIVSFLLCKGFGFRPPVSAMSLACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH SAALMALPIYYLPHTVNWLLLAIKVITGAAIYVLLIALLMPSERKTILSLVRGRRFVAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCC >Mature Secondary Structure MFRSTLLYLPAQLTGPLLQFLSVVIWAQTLSPAEVGVVTLIIALQEILFAALLMWWSHYM CCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRNIRKFSLNNSRSTFLKTELFAVAVSVFMQIVVSITIIAVYFDKNIIIPSYYIIVAFMI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SRSMSNYISERARAESMISLYSIMQILSPGLGLFISMVFLKFWQANAAAVLLGFTIAQFV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SLAIGFVICDFGRAVPYLDKQILIQALKFGIPVMIASTIALVALNAPRFIVDHLVGIEAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVFAIGYSLGLRASNFAVMLVTAGAYPLVVKKMVEEGLESAYEQLRKNIILVTIVVCPVA HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AGLIAINHDLIMLIVGKQFQEATFQVLPFTALAGLFRYLRGHTTDQVFLINSKPIYTTII HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH SVLDLAMALVSAFIGVYLFGLVGGALGPMVSGFTTLIVSFLLCKGFGFRPPVSAMSLACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH SAALMALPIYYLPHTVNWLLLAIKVITGAAIYVLLIALLMPSERKTILSLVRGRRFVAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA