| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is gsiB [H]
Identifier: 182679491
GI number: 182679491
Start: 2903497
End: 2905092
Strand: Reverse
Name: gsiB [H]
Synonym: Bind_2546
Alternate gene names: 182679491
Gene position: 2905092-2903497 (Counterclockwise)
Preceding gene: 182679492
Following gene: 182679485
Centisome position: 69.66
GC content: 53.95
Gene sequence:
>1596_bases ATGATCATCGACCGACGTCTGTTCAATCAGATGCTGCTCCTTGCCGGAAGCAATCTGTCTTTCCCTCACCCTGCTTCCGC AGCAAATGATCAGCCTGTCCGCGGAGGCACGCTCAAGGTCGTTTACTATCCGGAGCCGAACCAGGTCGTCGGCATTAATA CGAGCGCGGGTGGGCCCGCGACCATTGGCCCAAAAATTTTCGATGGCCTCCTCACCTATGATTACGCACTCAATCCACAA CCGGCGCTCGCCACAGAATGGTCGATCGCTCCGGACGGGCGGGTCTTGACCTTTACACTCCGCAAAGGCGTGAAATTCAG CGATGGCCATGATCTGACCTCGGAGGATGTCGCGTTTTCGATCAGCCGCCTGCGTGAAGCGCATCCGCGCGGCCGCATCA CTTTCCAGAATGTCACCGAGATCGAGACGGCCGATCCTCATATCGTCAAGATCACATTGTCGAAGCCTTCGGCGCCGTTG CTCCTGGCGTTGGCTGCTTCGGAATCCCCCATCGTGCCCAAGCATATTTTCGAACGCCTGAAGCCGAACGATGATCCAGC CTTCGATCAGATCATCGGCAGTGGCCCATTCCTACTCAAGGAATGGGTAAAAGGAAGCCATATCCTTCTCGCGCGTAATC CTGCCTATTGGGATGCGCCGAAGCCTTATCTCGATCGTATTATTTTCCGCTTCGTCTCAGATCCGGCCGCGCGCGCCGCC GTGCTCGAAGCCGGTGAAGGCGACATCGGGCCGAACGCCGTTGCTTTCAGCGATCTCGAACGTTTCGAGGCTCTGCCGCA ATTTACCGTGGATACAACTGTATTCGCCTATGGCGGCCCGCTGCAACAACTCATTCTCAATCTCGACAATGATTATCTGA AGAATTTGAAAGTCCGCCAGGCCATTGCGCATGCAATCGATCTCGAACAACTCAATGCGATCGTCTTTTATGGCTATGGA CAAGTCTCTCCGACGCCGATCAGTGTCGTAAACACCAAATATTTCGATCCCACGATCAAGGCGGCGACTTTCGACCCGAA GCTTGCGAACCAATTACTTGATGAAGCCGGATACAAGCGGGGGGCCGGCGGCTTCCGCTTCAAGCTGCGGCTCACCAATA ACCCCTATAATCCCTCCGCCTATTCCGATTTCCTGAAACAGGCTCTGGCCAGGATCGGCATCGACGCGACCATCCAGAAA TTCGATTTCGGATCTTATGTAAAGACGGTTTACACCGATGGCGCCTTCGATCTTTCGACCGAATCTTGCGGTAATTTCTT TGACCCCAGCGCTGGCGCCCAGCGTCTCTATTGGTCGAAGAACATCAAAAAGGGGCTGCCTTTTTCGAACGGCGCCCATT ATGTCAATCCACAACTCGATCAGATTCTCGAAGATGCTGCCAGTACACTCGACGAGAGCCGACGACGGACGCTCTTCTTC GAATTTCAGGAAATCATCGCGAGGGACCTGCCGATTATCAATTTGATCGCGCCACCGACCATCATCATCGCTAGAAAAAG CGTGAAGAATTATGCAACCGGTGGCGATGGCTTCCTCGGCAATTTCGCCGAAACCTATATCGATACGAAAAGTTAA
Upstream 100 bases:
>100_bases TACCATCTACAATCGCAAGATTTCCGGCCATACAATAGGCGCAGAAGGCGTCTTCGGGAACTTCGCCGATATTCATTTCG TGGGTTGAGGCCGAGCCGCT
Downstream 100 bases:
>100_bases TTCGTTCGTCTCTGGTATCTCAGTCTGCAGCAGTTCGAGGATCAACACATCCGGCAGGCGGGCAAACCACAGCTTGATCG GTGTCTACTCAAGGGAGCAA
Product: extracellular solute-binding protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MIIDRRLFNQMLLLAGSNLSFPHPASAANDQPVRGGTLKVVYYPEPNQVVGINTSAGGPATIGPKIFDGLLTYDYALNPQ PALATEWSIAPDGRVLTFTLRKGVKFSDGHDLTSEDVAFSISRLREAHPRGRITFQNVTEIETADPHIVKITLSKPSAPL LLALAASESPIVPKHIFERLKPNDDPAFDQIIGSGPFLLKEWVKGSHILLARNPAYWDAPKPYLDRIIFRFVSDPAARAA VLEAGEGDIGPNAVAFSDLERFEALPQFTVDTTVFAYGGPLQQLILNLDNDYLKNLKVRQAIAHAIDLEQLNAIVFYGYG QVSPTPISVVNTKYFDPTIKAATFDPKLANQLLDEAGYKRGAGGFRFKLRLTNNPYNPSAYSDFLKQALARIGIDATIQK FDFGSYVKTVYTDGAFDLSTESCGNFFDPSAGAQRLYWSKNIKKGLPFSNGAHYVNPQLDQILEDAASTLDESRRRTLFF EFQEIIARDLPIINLIAPPTIIIARKSVKNYATGGDGFLGNFAETYIDTKS
Sequences:
>Translated_531_residues MIIDRRLFNQMLLLAGSNLSFPHPASAANDQPVRGGTLKVVYYPEPNQVVGINTSAGGPATIGPKIFDGLLTYDYALNPQ PALATEWSIAPDGRVLTFTLRKGVKFSDGHDLTSEDVAFSISRLREAHPRGRITFQNVTEIETADPHIVKITLSKPSAPL LLALAASESPIVPKHIFERLKPNDDPAFDQIIGSGPFLLKEWVKGSHILLARNPAYWDAPKPYLDRIIFRFVSDPAARAA VLEAGEGDIGPNAVAFSDLERFEALPQFTVDTTVFAYGGPLQQLILNLDNDYLKNLKVRQAIAHAIDLEQLNAIVFYGYG QVSPTPISVVNTKYFDPTIKAATFDPKLANQLLDEAGYKRGAGGFRFKLRLTNNPYNPSAYSDFLKQALARIGIDATIQK FDFGSYVKTVYTDGAFDLSTESCGNFFDPSAGAQRLYWSKNIKKGLPFSNGAHYVNPQLDQILEDAASTLDESRRRTLFF EFQEIIARDLPIINLIAPPTIIIARKSVKNYATGGDGFLGNFAETYIDTKS >Mature_531_residues MIIDRRLFNQMLLLAGSNLSFPHPASAANDQPVRGGTLKVVYYPEPNQVVGINTSAGGPATIGPKIFDGLLTYDYALNPQ PALATEWSIAPDGRVLTFTLRKGVKFSDGHDLTSEDVAFSISRLREAHPRGRITFQNVTEIETADPHIVKITLSKPSAPL LLALAASESPIVPKHIFERLKPNDDPAFDQIIGSGPFLLKEWVKGSHILLARNPAYWDAPKPYLDRIIFRFVSDPAARAA VLEAGEGDIGPNAVAFSDLERFEALPQFTVDTTVFAYGGPLQQLILNLDNDYLKNLKVRQAIAHAIDLEQLNAIVFYGYG QVSPTPISVVNTKYFDPTIKAATFDPKLANQLLDEAGYKRGAGGFRFKLRLTNNPYNPSAYSDFLKQALARIGIDATIQK FDFGSYVKTVYTDGAFDLSTESCGNFFDPSAGAQRLYWSKNIKKGLPFSNGAHYVNPQLDQILEDAASTLDESRRRTLFF EFQEIIARDLPIINLIAPPTIIIARKSVKNYATGGDGFLGNFAETYIDTKS
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1789966, Length=505, Percent_Identity=25.7425742574257, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1787052, Length=458, Percent_Identity=26.6375545851528, Blast_Score=141, Evalue=8e-35, Organism=Escherichia coli, GI1787762, Length=433, Percent_Identity=27.4826789838337, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1789887, Length=504, Percent_Identity=24.0079365079365, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1787495, Length=486, Percent_Identity=23.2510288065844, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787551, Length=511, Percent_Identity=22.8962818003914, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1789397, Length=516, Percent_Identity=23.062015503876, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082063, Length=291, Percent_Identity=24.3986254295533, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58484; Mature: 58484
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS01040 SBP_BACTERIAL_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDRRLFNQMLLLAGSNLSFPHPASAANDQPVRGGTLKVVYYPEPNQVVGINTSAGGPA CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCC TIGPKIFDGLLTYDYALNPQPALATEWSIAPDGRVLTFTLRKGVKFSDGHDLTSEDVAFS CCCHHHHHHHHHEEECCCCCCCCCCCCEECCCCEEEEEEECCCCEECCCCCCCHHHHHHH ISRLREAHPRGRITFQNVTEIETADPHIVKITLSKPSAPLLLALAASESPIVPKHIFERL HHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHC KPNDDPAFDQIIGSGPFLLKEWVKGSHILLARNPAYWDAPKPYLDRIIFRFVSDPAARAA CCCCCHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHH VLEAGEGDIGPNAVAFSDLERFEALPQFTVDTTVFAYGGPLQQLILNLDNDYLKNLKVRQ EEECCCCCCCCCCHHHHHHHHHHHCCCCEECEEEEECCCCHHHHHHHCCHHHHHHHHHHH AIAHAIDLEQLNAIVFYGYGQVSPTPISVVNTKYFDPTIKAATFDPKLANQLLDEAGYKR HHHHHHCHHHCCEEEEEECCCCCCCCEEEEECEECCCCCEEEECCHHHHHHHHHHCCCCC GAGGFRFKLRLTNNPYNPSAYSDFLKQALARIGIDATIQKFDFGSYVKTVYTDGAFDLST CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCCCCCH ESCGNFFDPSAGAQRLYWSKNIKKGLPFSNGAHYVNPQLDQILEDAASTLDESRRRTLFF HHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EFQEIIARDLPIINLIAPPTIIIARKSVKNYATGGDGFLGNFAETYIDTKS HHHHHHHHCCCEEEEECCCEEEEEEHHHHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MIIDRRLFNQMLLLAGSNLSFPHPASAANDQPVRGGTLKVVYYPEPNQVVGINTSAGGPA CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCC TIGPKIFDGLLTYDYALNPQPALATEWSIAPDGRVLTFTLRKGVKFSDGHDLTSEDVAFS CCCHHHHHHHHHEEECCCCCCCCCCCCEECCCCEEEEEEECCCCEECCCCCCCHHHHHHH ISRLREAHPRGRITFQNVTEIETADPHIVKITLSKPSAPLLLALAASESPIVPKHIFERL HHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHC KPNDDPAFDQIIGSGPFLLKEWVKGSHILLARNPAYWDAPKPYLDRIIFRFVSDPAARAA CCCCCHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHH VLEAGEGDIGPNAVAFSDLERFEALPQFTVDTTVFAYGGPLQQLILNLDNDYLKNLKVRQ EEECCCCCCCCCCHHHHHHHHHHHCCCCEECEEEEECCCCHHHHHHHCCHHHHHHHHHHH AIAHAIDLEQLNAIVFYGYGQVSPTPISVVNTKYFDPTIKAATFDPKLANQLLDEAGYKR HHHHHHCHHHCCEEEEEECCCCCCCCEEEEECEECCCCCEEEECCHHHHHHHHHHCCCCC GAGGFRFKLRLTNNPYNPSAYSDFLKQALARIGIDATIQKFDFGSYVKTVYTDGAFDLST CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCCCCCH ESCGNFFDPSAGAQRLYWSKNIKKGLPFSNGAHYVNPQLDQILEDAASTLDESRRRTLFF HHCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EFQEIIARDLPIINLIAPPTIIIARKSVKNYATGGDGFLGNFAETYIDTKS HHHHHHHHCCCEEEEECCCEEEEEEHHHHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA