Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is idiA [H]

Identifier: 182679466

GI number: 182679466

Start: 2877287

End: 2878309

Strand: Reverse

Name: idiA [H]

Synonym: Bind_2521

Alternate gene names: 182679466

Gene position: 2878309-2877287 (Counterclockwise)

Preceding gene: 182679467

Following gene: 182679465

Centisome position: 69.02

GC content: 51.71

Gene sequence:

>1023_bases
ATGAAAAAGATTCCGTGGCTGGTTGCGCTTGTGTTTTTTGGTGTCGTGGCTGCCATCTGGTGGCGGTTGTATGTCGCCAA
GGAACAAGGGAGCGTCGTTGTCTATGTCAGCCATGATGAGGTCTTTTCGGAGCCTATTCTCAAGGACTTTGAGAAAGAGA
CAGGAATAAGGGTACGAGCGGTTTATGACACGGAGGAAACGAAGAGCACGGGGGCGATGAATAGGCTCATCGCTGAAAAG
AACAATCCGCAAGCCGACGTCTATTGGGCTAACGAACCGATCCGAGCCGAAATCTTACGACAACACCATATTGCGACGCC
CTATCTCTCGCCGAATGCCGAGGGGATTCCAGCAACATTTCGCGATCCTCAAGGCTATTGGACCGGTTTTGCGGCGAGGG
CGCGCGTGCTCATAGTGCATGAAGGCGAAAATCTGAAACCGACTTCTGTGTTCTCGTATTCAGACCCGCGTTGGCGCAAT
AAGATCGTTATCGCAAATCCTCTCTTTGGTACGACAACGGACCAGATCGCGGCGCTCTTTGTCCTTTTGGGCGATGAGCG
CGGACAAGTGTTCATGCAAGACCTACACGAGAATGGGGTCAAATTATCTCCAAGCAATGGCGACAGCGCTGATCTGGTAG
CGCGCGGTCAATTCGCTTTCAGCTTGGTCGATAGCGATGATGTCGTGAATCGGATCAATCAGCACGAGCCCGTGACGATG
GTTTATCCTGACCAAGGCCCGGATGAAATAGGTTGTTTTGTCGTACCCAATGCCGCCGTATTGATAGCCGGTTCACCCCA
TCAGGAAAGTGGCAAGAAGCTTATCGACTATTTGCTCTCGGCGGAAACCGAGAGAAAGCTCGCATTTTCCGATGCGGCTC
AGATTCCGCTCCATCCAAACGTCGCCACGCCACCTCAATTAAAACCGATCGAATCGATCAAAGTGATGAAAGTGGATTAT
GCTGCTATCGCAGCCAAGCTACAGTCAATCCAGTCCTTTCTGAAGAGCTGGGCCGGATTGTGA

Upstream 100 bases:

>100_bases
CCAATTAAACCATAGCTAGTCAGCCGGAGCCACCGGATCAAATCCTCGTCTTAAAGCACTCAGAAGAATCCTCGTGGACG
TCGACCCAAAGAGGCCGTGC

Downstream 100 bases:

>100_bases
CCATGGAAAAACGGCTGACATTATCGGCTGCCGTGTTGACGCTTGTCGTGATTGGGTTATTGCCCGTCCTGGCAATGGTC
GCCAAGACTTTCTTTGGCGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKKIPWLVALVFFGVVAAIWWRLYVAKEQGSVVVYVSHDEVFSEPILKDFEKETGIRVRAVYDTEETKSTGAMNRLIAEK
NNPQADVYWANEPIRAEILRQHHIATPYLSPNAEGIPATFRDPQGYWTGFAARARVLIVHEGENLKPTSVFSYSDPRWRN
KIVIANPLFGTTTDQIAALFVLLGDERGQVFMQDLHENGVKLSPSNGDSADLVARGQFAFSLVDSDDVVNRINQHEPVTM
VYPDQGPDEIGCFVVPNAAVLIAGSPHQESGKKLIDYLLSAETERKLAFSDAAQIPLHPNVATPPQLKPIESIKVMKVDY
AAIAAKLQSIQSFLKSWAGL

Sequences:

>Translated_340_residues
MKKIPWLVALVFFGVVAAIWWRLYVAKEQGSVVVYVSHDEVFSEPILKDFEKETGIRVRAVYDTEETKSTGAMNRLIAEK
NNPQADVYWANEPIRAEILRQHHIATPYLSPNAEGIPATFRDPQGYWTGFAARARVLIVHEGENLKPTSVFSYSDPRWRN
KIVIANPLFGTTTDQIAALFVLLGDERGQVFMQDLHENGVKLSPSNGDSADLVARGQFAFSLVDSDDVVNRINQHEPVTM
VYPDQGPDEIGCFVVPNAAVLIAGSPHQESGKKLIDYLLSAETERKLAFSDAAQIPLHPNVATPPQLKPIESIKVMKVDY
AAIAAKLQSIQSFLKSWAGL
>Mature_340_residues
MKKIPWLVALVFFGVVAAIWWRLYVAKEQGSVVVYVSHDEVFSEPILKDFEKETGIRVRAVYDTEETKSTGAMNRLIAEK
NNPQADVYWANEPIRAEILRQHHIATPYLSPNAEGIPATFRDPQGYWTGFAARARVLIVHEGENLKPTSVFSYSDPRWRN
KIVIANPLFGTTTDQIAALFVLLGDERGQVFMQDLHENGVKLSPSNGDSADLVARGQFAFSLVDSDDVVNRINQHEPVTM
VYPDQGPDEIGCFVVPNAAVLIAGSPHQESGKKLIDYLLSAETERKLAFSDAAQIPLHPNVATPPQLKPIESIKVMKVDY
AAIAAKLQSIQSFLKSWAGL

Specific function: May also be part of a periplasmic ABC transporter complex involved in iron import [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37754; Mature: 37754

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIPWLVALVFFGVVAAIWWRLYVAKEQGSVVVYVSHDEVFSEPILKDFEKETGIRVRA
CCCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEE
VYDTEETKSTGAMNRLIAEKNNPQADVYWANEPIRAEILRQHHIATPYLSPNAEGIPATF
EECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
RDPQGYWTGFAARARVLIVHEGENLKPTSVFSYSDPRWRNKIVIANPLFGTTTDQIAALF
CCCCCHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCCCCHHHHHEEE
VLLGDERGQVFMQDLHENGVKLSPSNGDSADLVARGQFAFSLVDSDDVVNRINQHEPVTM
EEECCCCCHHHHHHHHHCCCEECCCCCCCCCEEEECCEEEEEECCHHHHHHHCCCCCEEE
VYPDQGPDEIGCFVVPNAAVLIAGSPHQESGKKLIDYLLSAETERKLAFSDAAQIPLHPN
ECCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCC
VATPPQLKPIESIKVMKVDYAAIAAKLQSIQSFLKSWAGL
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIPWLVALVFFGVVAAIWWRLYVAKEQGSVVVYVSHDEVFSEPILKDFEKETGIRVRA
CCCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEE
VYDTEETKSTGAMNRLIAEKNNPQADVYWANEPIRAEILRQHHIATPYLSPNAEGIPATF
EECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
RDPQGYWTGFAARARVLIVHEGENLKPTSVFSYSDPRWRNKIVIANPLFGTTTDQIAALF
CCCCCHHCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCCCCHHHHHEEE
VLLGDERGQVFMQDLHENGVKLSPSNGDSADLVARGQFAFSLVDSDDVVNRINQHEPVTM
EEECCCCCHHHHHHHHHCCCEECCCCCCCCCEEEECCEEEEEECCHHHHHHHCCCCCEEE
VYPDQGPDEIGCFVVPNAAVLIAGSPHQESGKKLIDYLLSAETERKLAFSDAAQIPLHPN
ECCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCC
VATPPQLKPIESIKVMKVDYAAIAAKLQSIQSFLKSWAGL
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]