Click here to switch to the map view.

The map label for this gene is ycjN [C]

Identifier: 182679415

GI number: 182679415

Start: 2811502

End: 2812815

Strand: Reverse

Name: ycjN [C]

Synonym: Bind_2463

Alternate gene names: 182679415

Gene position: 2812815-2811502 (Counterclockwise)

Preceding gene: 182679419

Following gene: 182679414

Centisome position: 67.45

GC content: 57.23

Gene sequence:

>1314_bases
ATGAGACTCAGGACTTTGCTGTTCAGCGCCTGCGCTGCCGTGACTTTTGCCGGAACGGCTATTGCGGAAACGCTGACGAT
CGCCACCGTCAATAATGGCGACATGATCCGGATGCAGAAGCTCACGGATGACTTCAAAGCGAAAAATCCGGACATCGACC
TGAAATGGGTCACGCTCGAAGAAAATGTGCTGCGGCAGAAGGTGACGACTGACATCGCGACCAAGGGCGGTCAGTTCGAC
ATCATGACCATCGGCAATTACGAGGTGCCGATCTGGGCCAAACGGGGCTGGTTGAAGCCGCTCGACGCGCTTGGTGCGAA
TTATGATGAAGCAGACCTCCTGCCCACGATCCACGAAGCGGTCTCTTATGACGGCAAGCTCTACGCTTCGCCTTTTTATG
GCGAAAGCGCCATGGTCATGTATCGCAAGGATCTGTTCGAGAAGGCGGGGCTGACCATGCCGGCCGAGCCGAACTGGGAT
TTCATCGCCGAGGCCGCGCGCAAGATCACCGACAAGAATGCATCGATCTATGGCATCTGCTTGCGCGGCAAGGCGGGATG
GGGAGAGAACATGGCTTTTCTCACCGCACTCGCTAATTCCATGGGTGGCCGCTGGTTCGATGAGCAGTGGAAACCGCAAT
TTGACCAGCCGGAATGGCAAAAATCTATCGATTATTACGTCAAGCTGATGAAAGACGCTGGCCCTCCCGGTGCTTCCGCC
AACGGCTTCAACGAGAATCTCGCTCTCTTTCAAACCGGCAAATGCGGTATCTGGATAGACGCCACGGTCGCTGCCTCTTT
CGTCAGCAATCCCAAGGATTCCGCAGTCGCTGACAAGGTTGGTTACGCTTTGTTCCCAGCCTCTGGCACGCTCGGCAATC
ACGGCAATTGGCTGTGGGCGTGGAGTCTTGCCGTGCCGGCCGGGAGCAAGAAAGATAAAGCGGCGCAGAAGTTCATCGGT
TGGGCGACTGACAAGGCCTATATAGATCTCGTCGCAGGCAAGGAAGGATGGGCGAGCGTTCCTCCCGGCACGCGCATCTC
CCTTTATGAGAATGCGCAATATCGTCAGGCAGCGCCCTTCGCCCTTCCGACACTCGCGGCGATCAAGGCCGCCAATACGG
CCAAACCTACTGTCAAGCCCGTACCTTATACTGGCGGCCAGTTCGTGGCTATCGCGGAGTTTCAGGGAATTGGGACGGCA
GTCGGCCAGCAATTCTCGGCGGCTCTCGCCGGCCAGGTCACGCCGGAACAGGCGCTTCGGAATGCCCAGCAATTGACAGC
GCGGGAAATGACCAAGGCTGGCTACATCAAGTAA

Upstream 100 bases:

>100_bases
CGGTCATGAGATTGCCCTAAAGCGGCTTGACACTCTTTAAAGAAGAGTGATTTACTTACGAAAAATATAAGCACAAATAC
AAAACTGGGTGGGAAACGCC

Downstream 100 bases:

>100_bases
TACCAAAGGGCGTAAAGAACGACCTTTGGTTCCTTTCTTGAATTTTCGCTTTTTCAAAGCGATGGCGAAAATTCAAGAGC
GGTCCAACGGTCATTGATTA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MRLRTLLFSACAAVTFAGTAIAETLTIATVNNGDMIRMQKLTDDFKAKNPDIDLKWVTLEENVLRQKVTTDIATKGGQFD
IMTIGNYEVPIWAKRGWLKPLDALGANYDEADLLPTIHEAVSYDGKLYASPFYGESAMVMYRKDLFEKAGLTMPAEPNWD
FIAEAARKITDKNASIYGICLRGKAGWGENMAFLTALANSMGGRWFDEQWKPQFDQPEWQKSIDYYVKLMKDAGPPGASA
NGFNENLALFQTGKCGIWIDATVAASFVSNPKDSAVADKVGYALFPASGTLGNHGNWLWAWSLAVPAGSKKDKAAQKFIG
WATDKAYIDLVAGKEGWASVPPGTRISLYENAQYRQAAPFALPTLAAIKAANTAKPTVKPVPYTGGQFVAIAEFQGIGTA
VGQQFSAALAGQVTPEQALRNAQQLTAREMTKAGYIK

Sequences:

>Translated_437_residues
MRLRTLLFSACAAVTFAGTAIAETLTIATVNNGDMIRMQKLTDDFKAKNPDIDLKWVTLEENVLRQKVTTDIATKGGQFD
IMTIGNYEVPIWAKRGWLKPLDALGANYDEADLLPTIHEAVSYDGKLYASPFYGESAMVMYRKDLFEKAGLTMPAEPNWD
FIAEAARKITDKNASIYGICLRGKAGWGENMAFLTALANSMGGRWFDEQWKPQFDQPEWQKSIDYYVKLMKDAGPPGASA
NGFNENLALFQTGKCGIWIDATVAASFVSNPKDSAVADKVGYALFPASGTLGNHGNWLWAWSLAVPAGSKKDKAAQKFIG
WATDKAYIDLVAGKEGWASVPPGTRISLYENAQYRQAAPFALPTLAAIKAANTAKPTVKPVPYTGGQFVAIAEFQGIGTA
VGQQFSAALAGQVTPEQALRNAQQLTAREMTKAGYIK
>Mature_437_residues
MRLRTLLFSACAAVTFAGTAIAETLTIATVNNGDMIRMQKLTDDFKAKNPDIDLKWVTLEENVLRQKVTTDIATKGGQFD
IMTIGNYEVPIWAKRGWLKPLDALGANYDEADLLPTIHEAVSYDGKLYASPFYGESAMVMYRKDLFEKAGLTMPAEPNWD
FIAEAARKITDKNASIYGICLRGKAGWGENMAFLTALANSMGGRWFDEQWKPQFDQPEWQKSIDYYVKLMKDAGPPGASA
NGFNENLALFQTGKCGIWIDATVAASFVSNPKDSAVADKVGYALFPASGTLGNHGNWLWAWSLAVPAGSKKDKAAQKFIG
WATDKAYIDLVAGKEGWASVPPGTRISLYENAQYRQAAPFALPTLAAIKAANTAKPTVKPVPYTGGQFVAIAEFQGIGTA
VGQQFSAALAGQVTPEQALRNAQQLTAREMTKAGYIK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47545; Mature: 47545

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRTLLFSACAAVTFAGTAIAETLTIATVNNGDMIRMQKLTDDFKAKNPDIDLKWVTLE
CCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEHHHHHHHHCCCCCCEEEEEEEC
ENVLRQKVTTDIATKGGQFDIMTIGNYEVPIWAKRGWLKPLDALGANYDEADLLPTIHEA
HHHHHHHHHHHHHCCCCCEEEEEECCEECEEEECCCCCCCHHHHCCCCCCHHHHHHHHHH
VSYDGKLYASPFYGESAMVMYRKDLFEKAGLTMPAEPNWDFIAEAARKITDKNASIYGIC
HCCCCEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE
LRGKAGWGENMAFLTALANSMGGRWFDEQWKPQFDQPEWQKSIDYYVKLMKDAGPPGASA
EECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
NGFNENLALFQTGKCGIWIDATVAASFVSNPKDSAVADKVGYALFPASGTLGNHGNWLWA
CCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCCCEEEE
WSLAVPAGSKKDKAAQKFIGWATDKAYIDLVAGKEGWASVPPGTRISLYENAQYRQAAPF
EEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCC
ALPTLAAIKAANTAKPTVKPVPYTGGQFVAIAEFQGIGTAVGQQFSAALAGQVTPEQALR
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH
NAQQLTAREMTKAGYIK
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLRTLLFSACAAVTFAGTAIAETLTIATVNNGDMIRMQKLTDDFKAKNPDIDLKWVTLE
CCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEHHHHHHHHCCCCCCEEEEEEEC
ENVLRQKVTTDIATKGGQFDIMTIGNYEVPIWAKRGWLKPLDALGANYDEADLLPTIHEA
HHHHHHHHHHHHHCCCCCEEEEEECCEECEEEECCCCCCCHHHHCCCCCCHHHHHHHHHH
VSYDGKLYASPFYGESAMVMYRKDLFEKAGLTMPAEPNWDFIAEAARKITDKNASIYGIC
HCCCCEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE
LRGKAGWGENMAFLTALANSMGGRWFDEQWKPQFDQPEWQKSIDYYVKLMKDAGPPGASA
EECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
NGFNENLALFQTGKCGIWIDATVAASFVSNPKDSAVADKVGYALFPASGTLGNHGNWLWA
CCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCCCEEEE
WSLAVPAGSKKDKAAQKFIGWATDKAYIDLVAGKEGWASVPPGTRISLYENAQYRQAAPF
EEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCC
ALPTLAAIKAANTAKPTVKPVPYTGGQFVAIAEFQGIGTAVGQQFSAALAGQVTPEQALR
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH
NAQQLTAREMTKAGYIK
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]