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The map label for this gene is ycjP [C]

Identifier: 182679413

GI number: 182679413

Start: 2809509

End: 2810339

Strand: Reverse

Name: ycjP [C]

Synonym: Bind_2461

Alternate gene names: 182679413

Gene position: 2810339-2809509 (Counterclockwise)

Preceding gene: 182679414

Following gene: 182679412

Centisome position: 67.39

GC content: 56.92

Gene sequence:

>831_bases
ATGGCACGCCAAGGCTCAGCCCGCCGTAAACTGGTCACGACCGTCATCGCATGGACGTTTGGCCTTGCGATCTTCTTCCC
GATCTTGTGGACCGTGCTGACGAGCTTCAAGACCGAGGCCGAAGCGATCGCCTCGCCGCCTTCCTTTCTGTTCTTCCATT
GGACGACGGAAAACTACGCAGAGGTTCAGAGCCGCTCGAATTATTTCGGCCATTTCATGAATTCGGTCGTCATCGCCTTC
GGCTCGACATTTGCGGCGCTGGCGATCGCCATCCCTTCCGCCTGGGCCATGGCTTTTTCGCCGACGAAGCGCACCAAGAA
CATCTTGATGTGGATGCTTTCCACCAAAATGATGCCGTCGGTCGGCGCGCTCATCCCGGTCTATCTCATCTTCCGCGATA
CGGGGCTGCTCGATACGCGGACAGGCCTCGTCATCGTCCTCACTCTGATCAACCTGCCGATCGTCTTGTGGATGCTCTAC
ACCTATTTCAAGGAAATTCCTGGCGAGATCCTGGAGGCGGCGCGCATGGACGGCGCCTCGCTCATCAAGGAAATCGTCTA
TGTGCTGACGCCCATGGTTGTGCCTGGAATTGCCTCGACACTGCTGCTCAATGTCATTCTGGCCTGGAACGAAGCCTTCT
GGACATTGAACCTCACAACCTCCGACGCGGCGCCGCTGACGGCATTCATTGCCTCTTATTCGAGTCCGGAAGGCCTGTTC
TATGGCAAGCTGTCCGCAGCTTCCACCATGGCGATCGCACCGATTCTGATCCTTGGCTGGTTCTCGCAAAAGCAACTTGT
TCGCGGACTGACCTTTGGCGCGGTTAAATAG

Upstream 100 bases:

>100_bases
TGGCGGAGCCTCGGCGGGCGGCATTGTCGCCGTCGTGCTCGCCAATATCGTCGCCGTCTTCCTGATCCGCTTCGTCGGCA
AGAATCTGGAGGCTTGAATA

Downstream 100 bases:

>100_bases
AAAGAAACCTCATGGGCAGCATCTCGCTTCAGAACGTTTCCAAACATTTCGGCGCGTTCAAGGCTATTCCTTCTCTCAAT
CTCGAAATCGATGATGGCGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MARQGSARRKLVTTVIAWTFGLAIFFPILWTVLTSFKTEAEAIASPPSFLFFHWTTENYAEVQSRSNYFGHFMNSVVIAF
GSTFAALAIAIPSAWAMAFSPTKRTKNILMWMLSTKMMPSVGALIPVYLIFRDTGLLDTRTGLVIVLTLINLPIVLWMLY
TYFKEIPGEILEAARMDGASLIKEIVYVLTPMVVPGIASTLLLNVILAWNEAFWTLNLTTSDAAPLTAFIASYSSPEGLF
YGKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Sequences:

>Translated_276_residues
MARQGSARRKLVTTVIAWTFGLAIFFPILWTVLTSFKTEAEAIASPPSFLFFHWTTENYAEVQSRSNYFGHFMNSVVIAF
GSTFAALAIAIPSAWAMAFSPTKRTKNILMWMLSTKMMPSVGALIPVYLIFRDTGLLDTRTGLVIVLTLINLPIVLWMLY
TYFKEIPGEILEAARMDGASLIKEIVYVLTPMVVPGIASTLLLNVILAWNEAFWTLNLTTSDAAPLTAFIASYSSPEGLF
YGKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
>Mature_275_residues
ARQGSARRKLVTTVIAWTFGLAIFFPILWTVLTSFKTEAEAIASPPSFLFFHWTTENYAEVQSRSNYFGHFMNSVVIAFG
STFAALAIAIPSAWAMAFSPTKRTKNILMWMLSTKMMPSVGALIPVYLIFRDTGLLDTRTGLVIVLTLINLPIVLWMLYT
YFKEIPGEILEAARMDGASLIKEIVYVLTPMVVPGIASTLLLNVILAWNEAFWTLNLTTSDAAPLTAFIASYSSPEGLFY
GKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=29.6428571428571, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790464, Length=285, Percent_Identity=28.7719298245614, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789860, Length=202, Percent_Identity=26.2376237623762, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787369, Length=214, Percent_Identity=28.9719626168224, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30458; Mature: 30327

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQGSARRKLVTTVIAWTFGLAIFFPILWTVLTSFKTEAEAIASPPSFLFFHWTTENYA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
EVQSRSNYFGHFMNSVVIAFGSTFAALAIAIPSAWAMAFSPTKRTKNILMWMLSTKMMPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH
VGALIPVYLIFRDTGLLDTRTGLVIVLTLINLPIVLWMLYTYFKEIPGEILEAARMDGAS
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
LIKEIVYVLTPMVVPGIASTLLLNVILAWNEAFWTLNLTTSDAAPLTAFIASYSSPEGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCCEE
YGKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARQGSARRKLVTTVIAWTFGLAIFFPILWTVLTSFKTEAEAIASPPSFLFFHWTTENYA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
EVQSRSNYFGHFMNSVVIAFGSTFAALAIAIPSAWAMAFSPTKRTKNILMWMLSTKMMPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH
VGALIPVYLIFRDTGLLDTRTGLVIVLTLINLPIVLWMLYTYFKEIPGEILEAARMDGAS
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
LIKEIVYVLTPMVVPGIASTLLLNVILAWNEAFWTLNLTTSDAAPLTAFIASYSSPEGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCCEE
YGKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]