Click here to switch to the map view.

The map label for this gene is nuoJ [H]

Identifier: 182679343

GI number: 182679343

Start: 2730422

End: 2731030

Strand: Reverse

Name: nuoJ [H]

Synonym: Bind_2389

Alternate gene names: 182679343

Gene position: 2731030-2730422 (Counterclockwise)

Preceding gene: 182679344

Following gene: 182679342

Centisome position: 65.49

GC content: 57.96

Gene sequence:

>609_bases
ATGGATGTTCAGGCGTTTTTCTTCACGCTCTTCTCGACCGTCATGATCGTGTCGGCCATTATGGTCATCGCGGCGCGCAA
TCCGGTCCATTCCGTCCTGTTTCTGATTCTCGCCTTCTGCAATGCGGCGGGACTCTTCGTCATGCTCGGCGCTGAATTTC
TGGCGATGATCCTGGTCGTCGTCTATGTCGGCGCGATCGCGGTTTTGTTCCTCTTCGTCGTGATGATGCTCGACGTCGAC
TTCACCGAATTCAAACAGGGCTTTCTCCAATATCTGCCGGTTGGGGCCTTGATCGGGGCGGTCGTTCTCGTCGAACTGTT
CCTTGTCCTTGGCTCCTGGGTCGCGGGCTCTGGCTCTGTCACCGCCATTGCGACGCCCGTGCCGCCCGGCATGTCGAATA
CGATGGCGCTCGGCCGCGTGCTCTACACTCAATATCTCTATCTATTCCAGGCGGCGGCTATGGTTCTGTTGACCGCCATG
ATCGGCGCCATCGTTCTGACACTGCGCCATAAGGTTGGCGTCAAGCGCCAGGACATCGCGGCTCAAAACGCCAGAACCCC
TGTGGATGCTATCGAAATCCGCAAAGTGGCTTCTGGCCAGGGCCTGTGA

Upstream 100 bases:

>100_bases
TATTACGACAAGGATCGGCTCCTGCAGAACGGCGCCCGCTGGGAGCGCGAGATCGCACGGAATATCGCTCTCGACGCGCC
CTATCGCTGAGGAACCGATC

Downstream 100 bases:

>100_bases
CGCCAAACGAACGAGGTCGAAAACCATGACGGTCCCGCTCACCCAATATCTTCTGGTTGCCGCGATCTTGTTCACGATCG
GTGTCGCCGGCATCATCCTC

Product: NADH-ubiquinone/plastoquinone oxidoreductase chain 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDVQAFFFTLFSTVMIVSAIMVIAARNPVHSVLFLILAFCNAAGLFVMLGAEFLAMILVVVYVGAIAVLFLFVVMMLDVD
FTEFKQGFLQYLPVGALIGAVVLVELFLVLGSWVAGSGSVTAIATPVPPGMSNTMALGRVLYTQYLYLFQAAAMVLLTAM
IGAIVLTLRHKVGVKRQDIAAQNARTPVDAIEIRKVASGQGL

Sequences:

>Translated_202_residues
MDVQAFFFTLFSTVMIVSAIMVIAARNPVHSVLFLILAFCNAAGLFVMLGAEFLAMILVVVYVGAIAVLFLFVVMMLDVD
FTEFKQGFLQYLPVGALIGAVVLVELFLVLGSWVAGSGSVTAIATPVPPGMSNTMALGRVLYTQYLYLFQAAAMVLLTAM
IGAIVLTLRHKVGVKRQDIAAQNARTPVDAIEIRKVASGQGL
>Mature_202_residues
MDVQAFFFTLFSTVMIVSAIMVIAARNPVHSVLFLILAFCNAAGLFVMLGAEFLAMILVVVYVGAIAVLFLFVVMMLDVD
FTEFKQGFLQYLPVGALIGAVVLVELFLVLGSWVAGSGSVTAIATPVPPGMSNTMALGRVLYTQYLYLFQAAAMVLLTAM
IGAIVLTLRHKVGVKRQDIAAQNARTPVDAIEIRKVASGQGL

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=182, Percent_Identity=31.3186813186813, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 21637; Mature: 21637

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQAFFFTLFSTVMIVSAIMVIAARNPVHSVLFLILAFCNAAGLFVMLGAEFLAMILVV
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAIAVLFLFVVMMLDVDFTEFKQGFLQYLPVGALIGAVVLVELFLVLGSWVAGSGSV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TAIATPVPPGMSNTMALGRVLYTQYLYLFQAAAMVLLTAMIGAIVLTLRHKVGVKRQDIA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AQNARTPVDAIEIRKVASGQGL
HHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDVQAFFFTLFSTVMIVSAIMVIAARNPVHSVLFLILAFCNAAGLFVMLGAEFLAMILVV
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAIAVLFLFVVMMLDVDFTEFKQGFLQYLPVGALIGAVVLVELFLVLGSWVAGSGSV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TAIATPVPPGMSNTMALGRVLYTQYLYLFQAAAMVLLTAMIGAIVLTLRHKVGVKRQDIA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AQNARTPVDAIEIRKVASGQGL
HHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]