| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yadT [C]
Identifier: 182679286
GI number: 182679286
Start: 2667520
End: 2668638
Strand: Reverse
Name: yadT [C]
Synonym: Bind_2330
Alternate gene names: 182679286
Gene position: 2668638-2667520 (Counterclockwise)
Preceding gene: 182679288
Following gene: 182679285
Centisome position: 63.99
GC content: 56.57
Gene sequence:
>1119_bases ATGGCTGGGCAGAAGGACAGGCTGTTTCTCGCCATGACCAACTTTTCTTTGCCGATTCAAGGCCATTTTTTTCAAGGTAT TTTTTTTCGCAGATCCTTTCGCTGGATCTGGCTCGCGCTCTTTTGCCTCTTCCTCAGCACCGCGACGGGCGAGGCCTTTG CACGCGACATCAAGGACATGACGGGTCGCACCGTCTCTGTGCCGGAGCAGCCGGCCCGCATCTTTTCACTTTCCTACCCC TTGACCGTGCTGCTTTACGCGCTCGCGCCAGATCTGCTGGTCGCCTCCAATTTCCCCATCGCCGAGCCAGCGAAACCATT CCTGCCGCAGCAAGTGACGGCCTTGCCGGCGATCGGCGCGATGATGGGCATGGGGCCCGGCCATACAATGAATCCTGAAG AAATCATGGCCCTGCATCCAGATCTGTTGCTCGCTTGGGTCGACCCCATGGGGGATACGGAGAAGGTCGTGCATCCTGTC GCGGGGTCTGGCCTGCCGATCGTCTATGTCAAGCTCACCAATCTCGGCGATTATCCGTCAGCCTTGCGTTTTCTCGGTCG TTTGCTTGGCCGCACGAAGCGGGCGGAAGCGTTAGCAACCTATATTGAATTCGCTCAGATACAGGTTTCGGCGGCGGTCG AGAGCGTTCCCTACAAGGAGCGGGTGAAAGTCTTTTACGCGGAAGGGCATGATGGTCTTTCGACCGAATGCGATGCGTCC TTTCATGCTGAATCAATCAATTTCGCCGGCGGCAGGAATGTGCGGCACTGCCGGCAGACGACATTGATGGGCATGGAAAC GGTGACACTCGAACAGATCATCGCGGATCAGCCTGAAATCATCGTTGCCCAGGACCCGGGTTTTGCAAAGACCGTCGCAA GTGATCCCGCCTGGAAACAGGTGAAAGGGAGCCAGCATGTCCTGAGCGTGCCTCATCTGCCATTCAACTGGCTCGATCGA CCGCCGAGCTTCATGCGTGCGCTCGCCATCCGTTGGCTTGCCGCCAATTTCTATCCTGACCGCTTTTCTTTCGATCTTCG CGCCGAGCTGAAAACCTTCCATAGCTTATTCTTCGGCGTCAGCCTCAGCGATAAAGATGTCGACACTATCCTACACTGA
Upstream 100 bases:
>100_bases ACGATGGCTTCTTCTACAGGAAAGCCAGCCGTATTTATACTGTATTTGAAACGATACAGATAATGGTATAAGAACCAGTC GCCTTTTCAACTTGAAGGGG
Downstream 100 bases:
>100_bases TGTTCCGGCGCGCCGGGAGAGGACCTGGCACGCGCCCCTGCTCGTGATTTTGCTCGGCCTCACGATCGCCATAGCGCTCA CCATCGGCCGCTATCCCTTG
Product: periplasmic binding protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Membrane Component Of ABC-Transporter; Copper Amine Oxidase Domain Protein; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDMTGRTVSVPEQPARIFSLSYP LTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGAMMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPV AGSGLPIVYVKLTNLGDYPSALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQVKGSQHVLSVPHLPFNWLDR PPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGVSLSDKDVDTILH
Sequences:
>Translated_372_residues MAGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDMTGRTVSVPEQPARIFSLSYP LTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGAMMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPV AGSGLPIVYVKLTNLGDYPSALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQVKGSQHVLSVPHLPFNWLDR PPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGVSLSDKDVDTILH >Mature_371_residues AGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDMTGRTVSVPEQPARIFSLSYPL TVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGAMMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPVA GSGLPIVYVKLTNLGDYPSALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDASF HAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQVKGSQHVLSVPHLPFNWLDRP PSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGVSLSDKDVDTILH
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41387; Mature: 41256
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDM CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TGRTVSVPEQPARIFSLSYPLTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGA CCCEECCCCCCCCEEEECCHHHHHHHHHCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHH MMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPVAGSGLPIVYVKLTNLGDYPS HHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHH ALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCC FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQ CCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCHHH VKGSQHVLSVPHLPFNWLDRPPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGV HCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC SLSDKDVDTILH CCCCCCHHHHCC >Mature Secondary Structure AGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDM CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TGRTVSVPEQPARIFSLSYPLTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGA CCCEECCCCCCCCEEEECCHHHHHHHHHCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHH MMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPVAGSGLPIVYVKLTNLGDYPS HHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHH ALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCC FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQ CCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCHHH VKGSQHVLSVPHLPFNWLDRPPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGV HCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC SLSDKDVDTILH CCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA