| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is cysW [H]
Identifier: 182679218
GI number: 182679218
Start: 2593306
End: 2594226
Strand: Reverse
Name: cysW [H]
Synonym: Bind_2258
Alternate gene names: 182679218
Gene position: 2594226-2593306 (Counterclockwise)
Preceding gene: 182679219
Following gene: 182679217
Centisome position: 62.21
GC content: 58.85
Gene sequence:
>921_bases ATGTCTGAGACCCTGGTCGACTGGTCGCAGGAGGCCGGTTTCGCGCTTCCTGCCCAGCAAAAGGTCAAGCGCCGGGTTCG GACTCCCGCGACGACGGAAGGCCCGTTTCTGACGGGGGCTCTCATTGCCATTGCCTTGGCTTTTTTGCTCTTCTTTCTGG TGCTGCCGCTGATCGTCGTCTTCTACGAAGCGCTCAGTCATGGAATAGGCACTTATTGGTCTGCTCTTGCGGAGCCTGAC GCGCGCGCCGCGATCGGACTGACGCTTTTCGTCGCGGCCATTGCCGTTCCGCTCAACGTCGTTTTCGGTCTCGCCGCCGC CTGGGCCATCGCGAAATTCCAGTTTCCGGGCAAAAGTTTTCTGATCACCCTGATCGATCTGCCGTTCTCGGTCTCCCCCG TGGTTGCCGGCCTCGTTTATGTGTTGGTGTTCGGGGCGCAGGGTCTGTTGGGACACTGGCTGCAAGCCAATGATATCAAA ATCATCTTCGCCGTGCCCGGCGTCGTTCTGGCGACGATTTTCGTGACCTTTCCATTCGTTGCCCGGGAAATCATTCCGCT GATGGAGACACAAGGCACGGTCGAGGAAGAAGCCGCGCTGACGCTCGGGGCGAGCGGTCTTGCGACCTTCTTCCGCATCA CGCTTCCCAATATCAAATGGGCCTTGCTCTATGGCGTCCTGCTTTGCAATGCGCGGGCAATGGGCGAGTTCGGGGCTGTT TCCGTGGTGTCGGGCCATATTCGCGGTTTGACCGATACCATGCCGCTTCACATAGAAATTCTGTATAATGAGTATAATAT TGCGGCTGCTTTTGCCGTGGCGTCGCTGCTCGCGCTTCTGGCGCTCGTGACGCTCATCGCCAAGACCGTGCTCGAAAGCC GGTTCGGCGACGAACTCGCCAGAGGTGCCCGCCGACACTAA
Upstream 100 bases:
>100_bases GCGGCGGCGACCGCCATCGCGACCTTGATGCTCATCGTGTCTTTTTCGATTCTCCTTGTCATCAATATCATCCAGGCGTG GAGCCGGCGGAGGTTTGGTT
Downstream 100 bases:
>100_bases GCAAGCCAGATAGGGTTGCTTAGGGATCAATTGGATAGCTCTTTATCATCACCTCCGGCTTAGCGCCGGAACGCTGCTTT CCCTCGCTTTTTGAAGAAGC
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSETLVDWSQEAGFALPAQQKVKRRVRTPATTEGPFLTGALIAIALAFLLFFLVLPLIVVFYEALSHGIGTYWSALAEPD ARAAIGLTLFVAAIAVPLNVVFGLAAAWAIAKFQFPGKSFLITLIDLPFSVSPVVAGLVYVLVFGAQGLLGHWLQANDIK IIFAVPGVVLATIFVTFPFVAREIIPLMETQGTVEEEAALTLGASGLATFFRITLPNIKWALLYGVLLCNARAMGEFGAV SVVSGHIRGLTDTMPLHIEILYNEYNIAAAFAVASLLALLALVTLIAKTVLESRFGDELARGARRH
Sequences:
>Translated_306_residues MSETLVDWSQEAGFALPAQQKVKRRVRTPATTEGPFLTGALIAIALAFLLFFLVLPLIVVFYEALSHGIGTYWSALAEPD ARAAIGLTLFVAAIAVPLNVVFGLAAAWAIAKFQFPGKSFLITLIDLPFSVSPVVAGLVYVLVFGAQGLLGHWLQANDIK IIFAVPGVVLATIFVTFPFVAREIIPLMETQGTVEEEAALTLGASGLATFFRITLPNIKWALLYGVLLCNARAMGEFGAV SVVSGHIRGLTDTMPLHIEILYNEYNIAAAFAVASLLALLALVTLIAKTVLESRFGDELARGARRH >Mature_305_residues SETLVDWSQEAGFALPAQQKVKRRVRTPATTEGPFLTGALIAIALAFLLFFLVLPLIVVFYEALSHGIGTYWSALAEPDA RAAIGLTLFVAAIAVPLNVVFGLAAAWAIAKFQFPGKSFLITLIDLPFSVSPVVAGLVYVLVFGAQGLLGHWLQANDIKI IFAVPGVVLATIFVTFPFVAREIIPLMETQGTVEEEAALTLGASGLATFFRITLPNIKWALLYGVLLCNARAMGEFGAVS VVSGHIRGLTDTMPLHIEILYNEYNIAAAFAVASLLALLALVTLIAKTVLESRFGDELARGARRH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=266, Percent_Identity=52.2556390977444, Blast_Score=284, Evalue=5e-78, Organism=Escherichia coli, GI1788764, Length=228, Percent_Identity=38.5964912280702, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1786980, Length=181, Percent_Identity=35.9116022099448, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32824; Mature: 32693
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETLVDWSQEAGFALPAQQKVKRRVRTPATTEGPFLTGALIAIALAFLLFFLVLPLIVV CCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FYEALSHGIGTYWSALAEPDARAAIGLTLFVAAIAVPLNVVFGLAAAWAIAKFQFPGKSF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LITLIDLPFSVSPVVAGLVYVLVFGAQGLLGHWLQANDIKIIFAVPGVVLATIFVTFPFV EEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHH AREIIPLMETQGTVEEEAALTLGASGLATFFRITLPNIKWALLYGVLLCNARAMGEFGAV HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCHH SVVSGHIRGLTDTMPLHIEILYNEYNIAAAFAVASLLALLALVTLIAKTVLESRFGDELA HHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGARRH HHCCCC >Mature Secondary Structure SETLVDWSQEAGFALPAQQKVKRRVRTPATTEGPFLTGALIAIALAFLLFFLVLPLIVV CCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FYEALSHGIGTYWSALAEPDARAAIGLTLFVAAIAVPLNVVFGLAAAWAIAKFQFPGKSF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LITLIDLPFSVSPVVAGLVYVLVFGAQGLLGHWLQANDIKIIFAVPGVVLATIFVTFPFV EEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHH AREIIPLMETQGTVEEEAALTLGASGLATFFRITLPNIKWALLYGVLLCNARAMGEFGAV HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCHH SVVSGHIRGLTDTMPLHIEILYNEYNIAAAFAVASLLALLALVTLIAKTVLESRFGDELA HHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGARRH HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]