| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is mutB [H]
Identifier: 182679161
GI number: 182679161
Start: 2513570
End: 2515753
Strand: Reverse
Name: mutB [H]
Synonym: Bind_2199
Alternate gene names: 182679161
Gene position: 2515753-2513570 (Counterclockwise)
Preceding gene: 182679162
Following gene: 182679160
Centisome position: 60.33
GC content: 58.75
Gene sequence:
>2184_bases ATGAGCAGAATTCCCGATTTCGCCGCTCCGGACCAGGCGTCATGGGCCGATGTCCATGCTGCGACGCAGCCCGTGGGTAC GTCGCCACGGATGACGGCTGAGGGCATTGCTATCAAAAGCCTCTATACAGAGACAGACCGGCACACGCTCGCCTCGGTCG ATACTTATCCGGGAATGCGGCCGTTTCTGCGTGGTCCCTATCCGACCATGTATGTCACACAGCCTTGGACGATCCGCCAA TATGCTGGTTTCTCCACGGCGGAAGAATCGAATGCTTTCTACCGCCGTAATCTCGCCGCCGGCCAGAAGGGCTTGTCCAT CGCCTTCGATCTTGCGACGCATCGCGGCTATGATTCCGATCATCCGCGTGTTGCGAGCGATGTCGGCATGGCGGGCGTGG CGATCGATTCGATCTATGACATGCGGACTTTGTTTCAGGGCATTCCCCTCGGTGACATCAGTGTCTCCATGACGATGAAT GGCGCGGTTTTGCCGATTCTCGCGCTCTATATCGTCGCGGCCGAGGAACAGGGCGTGGCGCCCGAACGACTCGCGGGAAC CATTCAGAACGATATTCTGAAAGAGTTCATGGTCCGCAATACCTACATTTATCCGCCCGAGGATTCGATGCGGATCGTCG CGGATATTTTCGCTTTCACGGCGAAACATATGCCGAAGTTCAATTCGATCTCGATCTCCGGCTATCATATGCAGGAAGCC GGCGCGACACAGGATCTGGAACTCGCCTATACACTCGCCGATGGCGTGGACTATATCCGCGCCGGCATCGCGGCGGGGCT CGGCATTGATCAATTCGCTCCACGCCTGTCCTTCTTCTTCGCGACAGGCATGAATTTCTTCATGGAAATCGCCAAGCTGC GGGCGGCGCGGCAGTTGTGGTGCGAGCTTGTCGAGCGGTTCGGCCCCAAGGATGAAAAATCCTTGATGCTGCGCACACAT TGCCAGACTTCGGGCTGGTCGCTTGCTGCTCAGGATGTCTTCAACAATGTTGCGCGCACCTGCGTCGAGGCCATGGCCTC GACAGCGGGGCAGACGCAATCCCTGCATACAAACGCGCTCGATGAAGCGCTTGCCTTGCCAAGCGCATTTTCGGCCCGTA TCGCCCGCAACACCCAGCTTCTTTTGCAACAGGAAACCGGCATTACGCGGATCATCGATGTCTGGGGTGGTTCCTATTAT GTCGAAGCCTTGACGGCGGAACTCGCCGCCAAGGCGCGTGGTCACATTGCCGAAATTGAGGCGCTTGGCGGCATGGCCAA GGCAATTGGCAGCGGTTTGCCAAAATTGCGGATCGAACAGGCCGCCGCCCGCACACAGGGCCGGATAGACGCCGGGCTCG ACCGCATTATCGGCGTCAATCATGTCAAGCCGATTGAGGAAAAGCCGATCGATATTTTGCAGATCGACAATTCGGCGGTG CGTTCGGTTCAGATTGAAAAGCTCGCCCGGCTGCGTGCTGAACGTGACAATCAGGAAGTTTTGCGGGCGCTCGCAGCTCT GACTGAGGCGGCGGCGGACCGAACCAAGGGGAATCTGCTGGCGTTGGCGGTTGCAGCAGCGCGCGCCAAGGCGACGGTTG GGGAAATGTCCGCGGCGCTCGAAACAGTTTTCGGCCGCCATCGTGCCACGATTGAGGTCACGAGCGGTGTTTACAAAGAG GCGATGAGCCACAAGGCGGAATCCATTCAGGAAGCCGTCACCGCTGTCGAGGATTTTACCCGAAACAGTGGCCATCTCCC CGCCGTGCTCGTTGCGAAAATGGGCCAGGATGGCCATGACCGTGGGCAGAAAGTGGTGGCTTCCGGCTTTGCCGATCTCG GCTTCAGGGTCGTGCTCGGTCCGCTCTTCGCCACGCCGGAGGAAACCGCGCGCCAGGCGATCGAGGAGGATGTCGATGTC ATTGGCGTGTCGTCGCTCGCCGGTGGACATTTGAGCCTCGTGCCGGAATTGCGCGAGGAACTGGCCAAGCTTGGCCATCC CGAAATCATGATTGTTGTCGGTGGCGTCGTGCCGCCGCAAGATTACGCACAATTGCGTGATTCCGGTGCCGCCGCGATCT TTCCCCCGGGGACACCGCTTTTCTCGGCCGCTACGGAACTGCTTGAAACTCTCAGCGCGCATCAAGGTTTTGTCCAGAAG GACCCAGCCTTTTATCTTCGTTAA
Upstream 100 bases:
>100_bases GCGCCGGGATTGAGGCGTTCATCTTTACCGGCTGCGACGGGCTGGCCTATCCGACCGCTCTCCTGAAGGAAAAAGCATCT ACTCTGGCGGAGGCGATCTA
Downstream 100 bases:
>100_bases AAACAGCAAGAAGAGACAGCAAGAGCATGATCGGACGTTTGAACCATGTGGCGATCGCCGTGCCAGATCTCGCGGCGGCT TCGGCGCTTTACACCCAGGC
Product: methylmalonyl-CoA mutase, large subunit
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MSRIPDFAAPDQASWADVHAATQPVGTSPRMTAEGIAIKSLYTETDRHTLASVDTYPGMRPFLRGPYPTMYVTQPWTIRQ YAGFSTAEESNAFYRRNLAAGQKGLSIAFDLATHRGYDSDHPRVASDVGMAGVAIDSIYDMRTLFQGIPLGDISVSMTMN GAVLPILALYIVAAEEQGVAPERLAGTIQNDILKEFMVRNTYIYPPEDSMRIVADIFAFTAKHMPKFNSISISGYHMQEA GATQDLELAYTLADGVDYIRAGIAAGLGIDQFAPRLSFFFATGMNFFMEIAKLRAARQLWCELVERFGPKDEKSLMLRTH CQTSGWSLAAQDVFNNVARTCVEAMASTAGQTQSLHTNALDEALALPSAFSARIARNTQLLLQQETGITRIIDVWGGSYY VEALTAELAAKARGHIAEIEALGGMAKAIGSGLPKLRIEQAAARTQGRIDAGLDRIIGVNHVKPIEEKPIDILQIDNSAV RSVQIEKLARLRAERDNQEVLRALAALTEAAADRTKGNLLALAVAAARAKATVGEMSAALETVFGRHRATIEVTSGVYKE AMSHKAESIQEAVTAVEDFTRNSGHLPAVLVAKMGQDGHDRGQKVVASGFADLGFRVVLGPLFATPEETARQAIEEDVDV IGVSSLAGGHLSLVPELREELAKLGHPEIMIVVGGVVPPQDYAQLRDSGAAAIFPPGTPLFSAATELLETLSAHQGFVQK DPAFYLR
Sequences:
>Translated_727_residues MSRIPDFAAPDQASWADVHAATQPVGTSPRMTAEGIAIKSLYTETDRHTLASVDTYPGMRPFLRGPYPTMYVTQPWTIRQ YAGFSTAEESNAFYRRNLAAGQKGLSIAFDLATHRGYDSDHPRVASDVGMAGVAIDSIYDMRTLFQGIPLGDISVSMTMN GAVLPILALYIVAAEEQGVAPERLAGTIQNDILKEFMVRNTYIYPPEDSMRIVADIFAFTAKHMPKFNSISISGYHMQEA GATQDLELAYTLADGVDYIRAGIAAGLGIDQFAPRLSFFFATGMNFFMEIAKLRAARQLWCELVERFGPKDEKSLMLRTH CQTSGWSLAAQDVFNNVARTCVEAMASTAGQTQSLHTNALDEALALPSAFSARIARNTQLLLQQETGITRIIDVWGGSYY VEALTAELAAKARGHIAEIEALGGMAKAIGSGLPKLRIEQAAARTQGRIDAGLDRIIGVNHVKPIEEKPIDILQIDNSAV RSVQIEKLARLRAERDNQEVLRALAALTEAAADRTKGNLLALAVAAARAKATVGEMSAALETVFGRHRATIEVTSGVYKE AMSHKAESIQEAVTAVEDFTRNSGHLPAVLVAKMGQDGHDRGQKVVASGFADLGFRVVLGPLFATPEETARQAIEEDVDV IGVSSLAGGHLSLVPELREELAKLGHPEIMIVVGGVVPPQDYAQLRDSGAAAIFPPGTPLFSAATELLETLSAHQGFVQK DPAFYLR >Mature_726_residues SRIPDFAAPDQASWADVHAATQPVGTSPRMTAEGIAIKSLYTETDRHTLASVDTYPGMRPFLRGPYPTMYVTQPWTIRQY AGFSTAEESNAFYRRNLAAGQKGLSIAFDLATHRGYDSDHPRVASDVGMAGVAIDSIYDMRTLFQGIPLGDISVSMTMNG AVLPILALYIVAAEEQGVAPERLAGTIQNDILKEFMVRNTYIYPPEDSMRIVADIFAFTAKHMPKFNSISISGYHMQEAG ATQDLELAYTLADGVDYIRAGIAAGLGIDQFAPRLSFFFATGMNFFMEIAKLRAARQLWCELVERFGPKDEKSLMLRTHC QTSGWSLAAQDVFNNVARTCVEAMASTAGQTQSLHTNALDEALALPSAFSARIARNTQLLLQQETGITRIIDVWGGSYYV EALTAELAAKARGHIAEIEALGGMAKAIGSGLPKLRIEQAAARTQGRIDAGLDRIIGVNHVKPIEEKPIDILQIDNSAVR SVQIEKLARLRAERDNQEVLRALAALTEAAADRTKGNLLALAVAAARAKATVGEMSAALETVFGRHRATIEVTSGVYKEA MSHKAESIQEAVTAVEDFTRNSGHLPAVLVAKMGQDGHDRGQKVVASGFADLGFRVVLGPLFATPEETARQAIEEDVDVI GVSSLAGGHLSLVPELREELAKLGHPEIMIVVGGVVPPQDYAQLRDSGAAAIFPPGTPLFSAATELLETLSAHQGFVQKD PAFYLR
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=707, Percent_Identity=59.2644978783593, Blast_Score=862, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=687, Percent_Identity=60.2620087336244, Blast_Score=820, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=686, Percent_Identity=61.6618075801749, Blast_Score=868, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 78529; Mature: 78398
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIPDFAAPDQASWADVHAATQPVGTSPRMTAEGIAIKSLYTETDRHTLASVDTYPGMR CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHCCCHHHHCCCCCCCCC PFLRGPYPTMYVTQPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSIAFDLATHRGYDSD HHHCCCCCEEEEECCEEHHHHCCCCCCHHCCHHHHHHHHCCCCCCEEEEEEHHCCCCCCC HPRVASDVGMAGVAIDSIYDMRTLFQGIPLGDISVSMTMNGAVLPILALYIVAAEEQGVA CCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC PERLAGTIQNDILKEFMVRNTYIYPPEDSMRIVADIFAFTAKHMPKFNSISISGYHMQEA HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEECCC GATQDLELAYTLADGVDYIRAGIAAGLGIDQFAPRLSFFFATGMNFFMEIAKLRAARQLW CCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CELVERFGPKDEKSLMLRTHCQTSGWSLAAQDVFNNVARTCVEAMASTAGQTQSLHTNAL HHHHHHHCCCCCHHEHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DEALALPSAFSARIARNTQLLLQQETGITRIIDVWGGSYYVEALTAELAAKARGHIAEIE HHHHHCCHHHHHHHHCCHHHEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHH ALGGMAKAIGSGLPKLRIEQAAARTQGRIDAGLDRIIGVNHVKPIEEKPIDILQIDNSAV HHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHH RSVQIEKLARLRAERDNQEVLRALAALTEAAADRTKGNLLALAVAAARAKATVGEMSAAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH ETVFGRHRATIEVTSGVYKEAMSHKAESIQEAVTAVEDFTRNSGHLPAVLVAKMGQDGHD HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHH RGQKVVASGFADLGFRVVLGPLFATPEETARQAIEEDVDVIGVSSLAGGHLSLVPELREE HHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHCCCCCCEECHHHHHH LAKLGHPEIMIVVGGVVPPQDYAQLRDSGAAAIFPPGTPLFSAATELLETLSAHQGFVQK HHHCCCCEEEEEECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCC DPAFYLR CCCCCCC >Mature Secondary Structure SRIPDFAAPDQASWADVHAATQPVGTSPRMTAEGIAIKSLYTETDRHTLASVDTYPGMR CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHCCCHHHHCCCCCCCCC PFLRGPYPTMYVTQPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSIAFDLATHRGYDSD HHHCCCCCEEEEECCEEHHHHCCCCCCHHCCHHHHHHHHCCCCCCEEEEEEHHCCCCCCC HPRVASDVGMAGVAIDSIYDMRTLFQGIPLGDISVSMTMNGAVLPILALYIVAAEEQGVA CCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC PERLAGTIQNDILKEFMVRNTYIYPPEDSMRIVADIFAFTAKHMPKFNSISISGYHMQEA HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEECCC GATQDLELAYTLADGVDYIRAGIAAGLGIDQFAPRLSFFFATGMNFFMEIAKLRAARQLW CCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CELVERFGPKDEKSLMLRTHCQTSGWSLAAQDVFNNVARTCVEAMASTAGQTQSLHTNAL HHHHHHHCCCCCHHEHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DEALALPSAFSARIARNTQLLLQQETGITRIIDVWGGSYYVEALTAELAAKARGHIAEIE HHHHHCCHHHHHHHHCCHHHEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHH ALGGMAKAIGSGLPKLRIEQAAARTQGRIDAGLDRIIGVNHVKPIEEKPIDILQIDNSAV HHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHH RSVQIEKLARLRAERDNQEVLRALAALTEAAADRTKGNLLALAVAAARAKATVGEMSAAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH ETVFGRHRATIEVTSGVYKEAMSHKAESIQEAVTAVEDFTRNSGHLPAVLVAKMGQDGHD HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHH RGQKVVASGFADLGFRVVLGPLFATPEETARQAIEEDVDVIGVSSLAGGHLSLVPELREE HHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHCCCCCCEECHHHHHH LAKLGHPEIMIVVGGVVPPQDYAQLRDSGAAAIFPPGTPLFSAATELLETLSAHQGFVQK HHHCCCCEEEEEECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCC DPAFYLR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]