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The map label for this gene is yqjC [H]

Identifier: 182679160

GI number: 182679160

Start: 2513133

End: 2513543

Strand: Reverse

Name: yqjC [H]

Synonym: Bind_2198

Alternate gene names: 182679160

Gene position: 2513543-2513133 (Counterclockwise)

Preceding gene: 182679161

Following gene: 182679156

Centisome position: 60.27

GC content: 58.88

Gene sequence:

>411_bases
ATGATCGGACGTTTGAACCATGTGGCGATCGCCGTGCCAGATCTCGCGGCGGCTTCGGCGCTTTACACCCAGGCTCTCGG
CGCCGAAGTCTCCGAGCCTCAGGCGTTGCCTGAGCATGGGGTCAGTGTGGTATTCGTCGTTCTCCCCAATACGAAGATCG
AATTGCTGACGCCTCTCGGCGGCCAATCACCGATTGCTGCGTTCCTCGAACGTAATCCATCGGGCGGCATTCATCATGTA
TGCTATGAAGTCGATGATCTGAAAGCCGCGCGCGATCGCCTGGTGACGAATGGCGCGCGTGTCCTGGGTGATGGCGAGCC
CAAGATCGGAGCCCATGGCCTGCCGGTCTTGTTTCTCCATCCGAAGGATTTCAACGGTGCCCTGATCGAATTGGAACAGT
GCGCAGCCTAG

Upstream 100 bases:

>100_bases
CTACGGAACTGCTTGAAACTCTCAGCGCGCATCAAGGTTTTGTCCAGAAGGACCCAGCCTTTTATCTTCGTTAAAAACAG
CAAGAAGAGACAGCAAGAGC

Downstream 100 bases:

>100_bases
AGCATCAGACCCAAAAGTGGCTCCCACTTTTTGGGTCCAATCTGATGCGTTTTCAAAAAAAATAGAGCGCAGGCGCTACA
CCTCTTCCAAAGATCCAAGC

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIGRLNHVAIAVPDLAAASALYTQALGAEVSEPQALPEHGVSVVFVVLPNTKIELLTPLGGQSPIAAFLERNPSGGIHHV
CYEVDDLKAARDRLVTNGARVLGDGEPKIGAHGLPVLFLHPKDFNGALIELEQCAA

Sequences:

>Translated_136_residues
MIGRLNHVAIAVPDLAAASALYTQALGAEVSEPQALPEHGVSVVFVVLPNTKIELLTPLGGQSPIAAFLERNPSGGIHHV
CYEVDDLKAARDRLVTNGARVLGDGEPKIGAHGLPVLFLHPKDFNGALIELEQCAA
>Mature_136_residues
MIGRLNHVAIAVPDLAAASALYTQALGAEVSEPQALPEHGVSVVFVVLPNTKIELLTPLGGQSPIAAFLERNPSGGIHHV
CYEVDDLKAARDRLVTNGARVLGDGEPKIGAHGLPVLFLHPKDFNGALIELEQCAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=132, Percent_Identity=63.6363636363636, Blast_Score=162, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17506387, Length=133, Percent_Identity=59.3984962406015, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14273; Mature: 14273

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRLNHVAIAVPDLAAASALYTQALGAEVSEPQALPEHGVSVVFVVLPNTKIELLTPLG
CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCC
GQSPIAAFLERNPSGGIHHVCYEVDDLKAARDRLVTNGARVLGDGEPKIGAHGLPVLFLH
CCCHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEC
PKDFNGALIELEQCAA
CCCCCCEEEEEECCCC
>Mature Secondary Structure
MIGRLNHVAIAVPDLAAASALYTQALGAEVSEPQALPEHGVSVVFVVLPNTKIELLTPLG
CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCC
GQSPIAAFLERNPSGGIHHVCYEVDDLKAARDRLVTNGARVLGDGEPKIGAHGLPVLFLH
CCCHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEC
PKDFNGALIELEQCAA
CCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]