Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is phbC [H]

Identifier: 182679159

GI number: 182679159

Start: 2511776

End: 2512903

Strand: Direct

Name: phbC [H]

Synonym: Bind_2197

Alternate gene names: 182679159

Gene position: 2511776-2512903 (Clockwise)

Preceding gene: 182679158

Following gene: 182679163

Centisome position: 60.23

GC content: 54.34

Gene sequence:

>1128_bases
ATGGAACAGACTCTTTCCGCTCCGCAGAAACCCGAATCCTATCTCGACCTGCCCTTCTTCTGGCCGTTCAAGAACGTGAC
CAACATGACCGAGGAAGGTCTCACCCTCCTCAAGAAGAATCTTGAGTTTTTGGCCGAGGAACAAAAGTTCAAACACGGCC
TGGAGCCGCATCTTGCAACCCCGAATACGATCAAGCTTGATCTGCGCACCGTGCGCTTTCGCGATTATTCGAAGCCTGAC
GCCACGGGCATACCCACGATCGTCGACGCTCCCTTCGCTGGTCATTCGGCCATGATTGCCGATTATCACAAAGGCCAGAG
CTTGATGGAAACCTTGGCCGCCAATGGCATCGACAATCTCTATCTGTTCGACTGGAAATCAGCGACGCTTGATATGAAGG
ATCTCGAGATCGATCAATATCTCGCCGAGATCAATGTCTGCGTCGACGATGTCGGCGGAAGGGTCAATCTCATTGGTCTA
TGCCAGGGCGGCTGGATGTCCGCCATGTATGCGGCGCGTTTTCCCCACAAGGTCGCAAGCCTGGTCCTCGCCGGCTCACC
AATCGATACGGACGCCGGCAATGGGCCGATCAAGCAGATGGCGCACACCTATCCGCTTTCCTTCTATCAGGAGCTGGTGC
AAATGGGCGAGGGGCTCATGCGTGGTAAATTCATGCTGGCCGGCTGGAAGAACATGCATCCGGAAGCTCATTATTTCCAG
AACTATATCGATCTTTACGAACATATCGACGATCCGAATTACATCTCCAAGGAAGAAACCTTCGCGAGCTGGTACGAGCA
TCCGATCGACCTGCCCGGACGCTGGTATCTTCAAGCCATCACGCAGCTCTTCAAGGAAAATCGCTTCGCCAAAGGCACGT
TTGTCGCGCTGGGCGAGACCCTGAACCTGAAAAACGTCACCTGCCCGGTCTATCTGCTCGCCGGTGAAACGGACGATATC
ACCACCAAGGAACAGGTGTTTGATGCCGACAAATATCTCGGCACACCGAAGGACCAGATTCAGAAACAGCTCGTTCCAGG
CGGCCATATCGGCCTGTTCATGGGAACGCATACATTGAAGCAAGCCTGGCCCGGCATTGCCGCCTGGATCCGGACGAATG
GGAAGTAA

Upstream 100 bases:

>100_bases
CTCTGACTGCCGTGGTCATGGCGGCGATCACCTTCACATTATTGACGCTTGCCGCTTTCAGTGTCCGCCGCGTTCTCATC
ACTTGAATTCCAGAGGTCCT

Downstream 100 bases:

>100_bases
ATATCTCACCCAGTCGTGATAACAAAGCTACGGGTTCGGCTTGCCGGCTCGTTTCAGTCTTTACGAAAAGAGACTGATAC
CAAGGGTCGCGGAGAGTGAC

Product: PHB de-polymerase domain-containing protein

Products: NA

Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLATPNTIKLDLRTVRFRDYSKPD
ATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNLYLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGL
CQGGWMSAMYAARFPHKVASLVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ
NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGETLNLKNVTCPVYLLAGETDDI
TTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLKQAWPGIAAWIRTNGK

Sequences:

>Translated_375_residues
MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLATPNTIKLDLRTVRFRDYSKPD
ATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNLYLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGL
CQGGWMSAMYAARFPHKVASLVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ
NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGETLNLKNVTCPVYLLAGETDDI
TTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLKQAWPGIAAWIRTNGK
>Mature_375_residues
MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLATPNTIKLDLRTVRFRDYSKPD
ATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNLYLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGL
CQGGWMSAMYAARFPHKVASLVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ
NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGETLNLKNVTCPVYLLAGETDDI
TTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLKQAWPGIAAWIRTNGK

Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR010125 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 42321; Mature: 42321

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLAT
CCCCCCCCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PNTIKLDLRTVRFRDYSKPDATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNL
CCEEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEHHHHCCHHHHHHHHHCCCCCE
YLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGLCQGGWMSAMYAARFPHKVAS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCHHHHHH
LVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ
HHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCHHHHHH
NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGET
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCE
LNLKNVTCPVYLLAGETDDITTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLK
ECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECHHHHH
QAWPGIAAWIRTNGK
HHCCCCEEHEECCCC
>Mature Secondary Structure
MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLAT
CCCCCCCCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PNTIKLDLRTVRFRDYSKPDATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNL
CCEEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEHHHHCCHHHHHHHHHCCCCCE
YLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGLCQGGWMSAMYAARFPHKVAS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCHHHHHH
LVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ
HHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCHHHHHH
NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGET
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCE
LNLKNVTCPVYLLAGETDDITTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLK
ECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECHHHHH
QAWPGIAAWIRTNGK
HHCCCCEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]