| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182679095
Identifier: 182679095
GI number: 182679095
Start: 2434693
End: 2437071
Strand: Reverse
Name: 182679095
Synonym: Bind_2132
Alternate gene names: NA
Gene position: 2437071-2434693 (Counterclockwise)
Preceding gene: 182679096
Following gene: 182679094
Centisome position: 58.44
GC content: 52.75
Gene sequence:
>2379_bases TTGACATATCAATATATATCGATGGTTCCACCGGGTGGCGGATTGAGTAATCAGATTACAATCAATGGGCGCGTCTATAC ATCGGATCCTCTGACACCCATTAACATCCCATCGTTTGATGCGCTGGTTGCAGAGGCAAATGGATGGATACGAATATCTG CTTTTACCGGAGCCAGTTCCAGCCTCAACGCCCCATCAACCACTGACTACAAAACGTTCTCGGGTTCCGGGCTGGCGCCA GGCTCAACCGTTACCGTTTACAAAAACAATGTTTCGGCGGGGACCGCGATAGTCGCCGTTGACGGGACTTGGTCGTTCAC TTTTACCACAGCGCCTGCTGCGCAGTCCTCCATTACCTATTCTGGTGTGCCGGAAAGCCCCGCAATAACGATTCCTAACA GCGGTAATGGAACGTCAGGACCACTGGCTACTCTGTCACTATCGCCGCTCACGGGCTCGGCAGGCGTTGCCTATTCCGGC GCGATTGCCGGTGTCACCGCGGGGTCGACCATTGTTGCAGCCTCCAGCGACGGAACGGCGCTCATTGTCAATGGCACGAG CGTCACAGGCACGTTCCCGACCGGTGGCACTAAGTCTATCACGCTCACGGAAACTCTTGCTGGCGCGGCGAATAGCCCAA ATCTGACTATCATCAGCTTGACGATCACCGCCGTCTCAGGCCCGACGCTGGTTCCCTTAACCGTTTCTCCGCTTACTATC ACGGCTGGTAGCGTGTTCTCGGGTGCCGTGACTGGGAGCACCGCTGGTTCGACAATTTCTGCGACTTCCAGCGATGGTAT TGCAGTTAATTCCTATAGTAACTCTCGTGTCACCGCAAACTTCCCGACCGCTGGTTCGAAAACGGTCACCATTACAGAAA CTCTTGCTGGCGCGACCAATAGCCCCAAAGTTACGACGCAGACAATCAACGTCACCGCCAGTGGTGCACCCAACTCTTCC ACACCTTTTACTCTCAGTCGTATCGTCAATGTTGCGGGTGGCGGTACGAGTCTTACGGCGCTGGGCCATTCGTGGACGGC AGTGAACATTTCTGGTGTAAGTAATGTTTACGCCAATACGCGCTATGCGAGAGGATATACCTGCGCTTTGATGCTTTATC TTGGATGGAACTACACACCTGTTCGCACTTATGCCGTCAGCGGTTATACCTTATCTCTGGATCTGGGCATTTATAATGGG AGTCGGACCACTGACGCGCCTGTGCTGAGGTATGGTGCGATCGGGTCGGATGGATGGAACCCTGACATCTTCCTTTTCGA AGGCGGCTCTAACGATATTTCCGGTGGCAGCACGTTTTCGCAAATGCAAACTGATGCCGCAGCGGCACAGAACTATGTCC TGGGCCTTGCTCAGAAGCCGCGTATGCCTCTGCTAGACATTATCCCGCGCAACAGCTTCTCAAATGATGCTGTAGCGCAA GCAACGAGAACTCAATATAATAGCTGGAGCAATACACGTAACGTCGCGGATGATTATGTACTTCCTTATGACGTGAGTTA TATTTTCGAAGATCCGAGCAATCCGGGGCATATGCTTGCGAATGTTTCGGATGATGGCGTTCACCCGAACACGTGGTCAG GGTTCCTTTTCGCGAAAAAGGCTTTTGACAGTATGAGTGCGAAGGGCTGGCTTCCGGCTCCGATCGTGTTCCCTTATGCC AAAGATGCGGCATCCGATCCGACCAACCTTTTGCAACATGCGGTTTCCGATAATTCGGCCAACCAGCTTTTTTCCAATAC AGCGGGTGCGGCGGTCAATCTGGCCGCAGGCTCCGTCGTGCCGAGCGGTTACACTCTCTCGGCTGATACCTCTTGGACAA CTTCAGCCGGTGCGCAGCCGTCCTCCGCGCTCGTTTTGGATGATGGAGCAACTCTCAGAAAGAAGCTGGTTATCACGATT CCGAACGGAAACGCGCCTGGCTCGGTGGCGGCCGATGTCGGTAAAACATGGCTGACCTTGACGTCCTCAACCATTATTTC TTCCGCGCGGTCGCAGACCTTCAATGGTGGCGCGACGCCGATCGTTGCCGGAAATACCTATCGTGCCGGCATCAAGTTGA AAATTTCATGTCCCAATATTTTTATCAGCGGATTGACATTTCGTTGGGTTGTCGATGGTACCATTGTTAATCAGATCGCT TATGCTTCAAGCGGCTTCTCCAATGCGGGCGAAGTATTTCCACAAGGAGTATATGATCTTCTGACGGAAGCATTTACGGT TCCCGCATTTCTGTCGTCAATCCAGCTTTCTAGCCTGATTTTGACCCTTGCATCCGTACCTGGCTCAGCGACAGGTGGAA CGATAGAAATATCAGCACCTTATATTAGGCCATACACGTTTCTTGCGGCTGCTCCGTAA
Upstream 100 bases:
>100_bases TCTCTATAAATCCATGAAACCGAGCAACGCGCGACGCAACGCCGGAAATCCATGCTGCGCCTCGTGATCGATAATTAATG ACTCCAGGTGGGGAAATAGT
Downstream 100 bases:
>100_bases TCAAGAATATCGGTTTGGCTGGTTGCGCAGCCATGCCGATGTAATGGTAATGCAAATACATCTTATTTTTATCGTCGACG CAAAGCACTGTTATCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 791
Protein sequence:
>792_residues MTYQYISMVPPGGGLSNQITINGRVYTSDPLTPINIPSFDALVAEANGWIRISAFTGASSSLNAPSTTDYKTFSGSGLAP GSTVTVYKNNVSAGTAIVAVDGTWSFTFTTAPAAQSSITYSGVPESPAITIPNSGNGTSGPLATLSLSPLTGSAGVAYSG AIAGVTAGSTIVAASSDGTALIVNGTSVTGTFPTGGTKSITLTETLAGAANSPNLTIISLTITAVSGPTLVPLTVSPLTI TAGSVFSGAVTGSTAGSTISATSSDGIAVNSYSNSRVTANFPTAGSKTVTITETLAGATNSPKVTTQTINVTASGAPNSS TPFTLSRIVNVAGGGTSLTALGHSWTAVNISGVSNVYANTRYARGYTCALMLYLGWNYTPVRTYAVSGYTLSLDLGIYNG SRTTDAPVLRYGAIGSDGWNPDIFLFEGGSNDISGGSTFSQMQTDAAAAQNYVLGLAQKPRMPLLDIIPRNSFSNDAVAQ ATRTQYNSWSNTRNVADDYVLPYDVSYIFEDPSNPGHMLANVSDDGVHPNTWSGFLFAKKAFDSMSAKGWLPAPIVFPYA KDAASDPTNLLQHAVSDNSANQLFSNTAGAAVNLAAGSVVPSGYTLSADTSWTTSAGAQPSSALVLDDGATLRKKLVITI PNGNAPGSVAADVGKTWLTLTSSTIISSARSQTFNGGATPIVAGNTYRAGIKLKISCPNIFISGLTFRWVVDGTIVNQIA YASSGFSNAGEVFPQGVYDLLTEAFTVPAFLSSIQLSSLILTLASVPGSATGGTIEISAPYIRPYTFLAAAP
Sequences:
>Translated_792_residues MTYQYISMVPPGGGLSNQITINGRVYTSDPLTPINIPSFDALVAEANGWIRISAFTGASSSLNAPSTTDYKTFSGSGLAP GSTVTVYKNNVSAGTAIVAVDGTWSFTFTTAPAAQSSITYSGVPESPAITIPNSGNGTSGPLATLSLSPLTGSAGVAYSG AIAGVTAGSTIVAASSDGTALIVNGTSVTGTFPTGGTKSITLTETLAGAANSPNLTIISLTITAVSGPTLVPLTVSPLTI TAGSVFSGAVTGSTAGSTISATSSDGIAVNSYSNSRVTANFPTAGSKTVTITETLAGATNSPKVTTQTINVTASGAPNSS TPFTLSRIVNVAGGGTSLTALGHSWTAVNISGVSNVYANTRYARGYTCALMLYLGWNYTPVRTYAVSGYTLSLDLGIYNG SRTTDAPVLRYGAIGSDGWNPDIFLFEGGSNDISGGSTFSQMQTDAAAAQNYVLGLAQKPRMPLLDIIPRNSFSNDAVAQ ATRTQYNSWSNTRNVADDYVLPYDVSYIFEDPSNPGHMLANVSDDGVHPNTWSGFLFAKKAFDSMSAKGWLPAPIVFPYA KDAASDPTNLLQHAVSDNSANQLFSNTAGAAVNLAAGSVVPSGYTLSADTSWTTSAGAQPSSALVLDDGATLRKKLVITI PNGNAPGSVAADVGKTWLTLTSSTIISSARSQTFNGGATPIVAGNTYRAGIKLKISCPNIFISGLTFRWVVDGTIVNQIA YASSGFSNAGEVFPQGVYDLLTEAFTVPAFLSSIQLSSLILTLASVPGSATGGTIEISAPYIRPYTFLAAAP >Mature_791_residues TYQYISMVPPGGGLSNQITINGRVYTSDPLTPINIPSFDALVAEANGWIRISAFTGASSSLNAPSTTDYKTFSGSGLAPG STVTVYKNNVSAGTAIVAVDGTWSFTFTTAPAAQSSITYSGVPESPAITIPNSGNGTSGPLATLSLSPLTGSAGVAYSGA IAGVTAGSTIVAASSDGTALIVNGTSVTGTFPTGGTKSITLTETLAGAANSPNLTIISLTITAVSGPTLVPLTVSPLTIT AGSVFSGAVTGSTAGSTISATSSDGIAVNSYSNSRVTANFPTAGSKTVTITETLAGATNSPKVTTQTINVTASGAPNSST PFTLSRIVNVAGGGTSLTALGHSWTAVNISGVSNVYANTRYARGYTCALMLYLGWNYTPVRTYAVSGYTLSLDLGIYNGS RTTDAPVLRYGAIGSDGWNPDIFLFEGGSNDISGGSTFSQMQTDAAAAQNYVLGLAQKPRMPLLDIIPRNSFSNDAVAQA TRTQYNSWSNTRNVADDYVLPYDVSYIFEDPSNPGHMLANVSDDGVHPNTWSGFLFAKKAFDSMSAKGWLPAPIVFPYAK DAASDPTNLLQHAVSDNSANQLFSNTAGAAVNLAAGSVVPSGYTLSADTSWTTSAGAQPSSALVLDDGATLRKKLVITIP NGNAPGSVAADVGKTWLTLTSSTIISSARSQTFNGGATPIVAGNTYRAGIKLKISCPNIFISGLTFRWVVDGTIVNQIAY ASSGFSNAGEVFPQGVYDLLTEAFTVPAFLSSIQLSSLILTLASVPGSATGGTIEISAPYIRPYTFLAAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80943; Mature: 80811
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYQYISMVPPGGGLSNQITINGRVYTSDPLTPINIPSFDALVAEANGWIRISAFTGASS CCEEEEEEECCCCCCCCEEEECCEEEECCCCCCCCCCCCCEEEECCCCEEEEEEECCCCC SLNAPSTTDYKTFSGSGLAPGSTVTVYKNNVSAGTAIVAVDGTWSFTFTTAPAAQSSITY CCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEE SGVPESPAITIPNSGNGTSGPLATLSLSPLTGSAGVAYSGAIAGVTAGSTIVAASSDGTA CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEECCEEEEEECCCEEEEECCCCCE LIVNGTSVTGTFPTGGTKSITLTETLAGAANSPNLTIISLTITAVSGPTLVPLTVSPLTI EEEECCEEEEECCCCCCCEEEEEHHHCCCCCCCCEEEEEEEEEEECCCEEEEEEECCEEE TAGSVFSGAVTGSTAGSTISATSSDGIAVNSYSNSRVTANFPTAGSKTVTITETLAGATN ECCCEEECEECCCCCCCEEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEEEECCCCCC SPKVTTQTINVTASGAPNSSTPFTLSRIVNVAGGGTSLTALGHSWTAVNISGVSNVYANT CCEEEEEEEEEEECCCCCCCCCEEEEHHEEECCCCCEEEEECCCEEEEEECCCCHHHCCC RYARGYTCALMLYLGWNYTPVRTYAVSGYTLSLDLGIYNGSRTTDAPVLRYGAIGSDGWN EECCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCCCCCEEEECCCCCCCCC PDIFLFEGGSNDISGGSTFSQMQTDAAAAQNYVLGLAQKPRMPLLDIIPRNSFSNDAVAQ CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCCCHHHH ATRTQYNSWSNTRNVADDYVLPYDVSYIFEDPSNPGHMLANVSDDGVHPNTWSGFLFAKK HHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEH AFDSMSAKGWLPAPIVFPYAKDAASDPTNLLQHAVSDNSANQLFSNTAGAAVNLAAGSVV HHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCC PSGYTLSADTSWTTSAGAQPSSALVLDDGATLRKKLVITIPNGNAPGSVAADVGKTWLTL CCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEE TSSTIISSARSQTFNGGATPIVAGNTYRAGIKLKISCPNIFISGLTFRWVVDGTIVNQIA EHHHHHHHHHCCCCCCCCCEEEECCEEECCEEEEEECCCEEEECEEEEEEECCHHHHHHH YASSGFSNAGEVFPQGVYDLLTEAFTVPAFLSSIQLSSLILTLASVPGSATGGTIEISAP HHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC YIRPYTFLAAAP CCCCEEEEEECC >Mature Secondary Structure TYQYISMVPPGGGLSNQITINGRVYTSDPLTPINIPSFDALVAEANGWIRISAFTGASS CEEEEEEECCCCCCCCEEEECCEEEECCCCCCCCCCCCCEEEECCCCEEEEEEECCCCC SLNAPSTTDYKTFSGSGLAPGSTVTVYKNNVSAGTAIVAVDGTWSFTFTTAPAAQSSITY CCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEE SGVPESPAITIPNSGNGTSGPLATLSLSPLTGSAGVAYSGAIAGVTAGSTIVAASSDGTA CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEECCEEEEEECCCEEEEECCCCCE LIVNGTSVTGTFPTGGTKSITLTETLAGAANSPNLTIISLTITAVSGPTLVPLTVSPLTI EEEECCEEEEECCCCCCCEEEEEHHHCCCCCCCCEEEEEEEEEEECCCEEEEEEECCEEE TAGSVFSGAVTGSTAGSTISATSSDGIAVNSYSNSRVTANFPTAGSKTVTITETLAGATN ECCCEEECEECCCCCCCEEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEEEECCCCCC SPKVTTQTINVTASGAPNSSTPFTLSRIVNVAGGGTSLTALGHSWTAVNISGVSNVYANT CCEEEEEEEEEEECCCCCCCCCEEEEHHEEECCCCCEEEEECCCEEEEEECCCCHHHCCC RYARGYTCALMLYLGWNYTPVRTYAVSGYTLSLDLGIYNGSRTTDAPVLRYGAIGSDGWN EECCCEEEEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCCCCCEEEECCCCCCCCC PDIFLFEGGSNDISGGSTFSQMQTDAAAAQNYVLGLAQKPRMPLLDIIPRNSFSNDAVAQ CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCCCHHHH ATRTQYNSWSNTRNVADDYVLPYDVSYIFEDPSNPGHMLANVSDDGVHPNTWSGFLFAKK HHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEH AFDSMSAKGWLPAPIVFPYAKDAASDPTNLLQHAVSDNSANQLFSNTAGAAVNLAAGSVV HHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCC PSGYTLSADTSWTTSAGAQPSSALVLDDGATLRKKLVITIPNGNAPGSVAADVGKTWLTL CCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEE TSSTIISSARSQTFNGGATPIVAGNTYRAGIKLKISCPNIFISGLTFRWVVDGTIVNQIA EHHHHHHHHHCCCCCCCCCEEEECCEEECCEEEEEECCCEEEECEEEEEEECCHHHHHHH YASSGFSNAGEVFPQGVYDLLTEAFTVPAFLSSIQLSSLILTLASVPGSATGGTIEISAP HHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC YIRPYTFLAAAP CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA