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The map label for this gene is tlpC [H]

Identifier: 182679086

GI number: 182679086

Start: 2422810

End: 2423331

Strand: Reverse

Name: tlpC [H]

Synonym: Bind_2123

Alternate gene names: 182679086

Gene position: 2423331-2422810 (Counterclockwise)

Preceding gene: 182679087

Following gene: 182679085

Centisome position: 58.11

GC content: 54.02

Gene sequence:

>522_bases
ATGAATAGAGCCCGATTTCTTCACTTAGCCTGGACAGCAGGATTCCTCGTTGCAGCGTCGATGTTCATTCCGACGACAGG
CTATAGCCAGACTGATACGAAAGTCGCCAAGGCCATGGCTGACCTGAAAGCGGCGACCAATAAACTCGGAACGCCGAAGC
TGGAAGGAATGGACCCCGTCAGTGGCAAAAACGCTGCAGCCTTGTATTTCGGCAAAACCAAGGTCAACAACGATTTCAGC
GTCGTCGACGCCGTCACCAGGGAGAACGGCGGAACGGCTACGCTGTTTGCGAAGACTGAGGACGAATACGTGCGCGTTTC
GACCAATGTCCCTAAAGGCGACGGCCGCGCGACCGGAACGATCCTGGACCCGAAGGGCAAGGTCATCGTTCAGATCAACG
CCGGCAAGCCTTTCTATGGTGACGTCGATATCCTCGGAACGATGTACTCGACAGGCTACGAGCCAATAAAAGACGCCTCC
GGCAAAATTATCGGTATCTGGTATGTCGGGTATAAGAAATAG

Upstream 100 bases:

>100_bases
TCATCTGGGGATTGGTAGTATACTGATCTGTGATCCCTCGAATGGTCAAAAGCTATTCATTGATAACGCAAACAAAAAAG
GCGTGGCCAGGGAGGATAAA

Downstream 100 bases:

>100_bases
CCGGATTTGACACGTCTGGCGCCAGAAGTGGCGTTGCGACTGTTTGGGAGGGCGGCGCGTCCTTAACGCCTGATGCCCCA
ACTCTCCTGCTCGAATTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MNRARFLHLAWTAGFLVAASMFIPTTGYSQTDTKVAKAMADLKAATNKLGTPKLEGMDPVSGKNAAALYFGKTKVNNDFS
VVDAVTRENGGTATLFAKTEDEYVRVSTNVPKGDGRATGTILDPKGKVIVQINAGKPFYGDVDILGTMYSTGYEPIKDAS
GKIIGIWYVGYKK

Sequences:

>Translated_173_residues
MNRARFLHLAWTAGFLVAASMFIPTTGYSQTDTKVAKAMADLKAATNKLGTPKLEGMDPVSGKNAAALYFGKTKVNNDFS
VVDAVTRENGGTATLFAKTEDEYVRVSTNVPKGDGRATGTILDPKGKVIVQINAGKPFYGDVDILGTMYSTGYEPIKDAS
GKIIGIWYVGYKK
>Mature_173_residues
MNRARFLHLAWTAGFLVAASMFIPTTGYSQTDTKVAKAMADLKAATNKLGTPKLEGMDPVSGKNAAALYFGKTKVNNDFS
VVDAVTRENGGTATLFAKTEDEYVRVSTNVPKGDGRATGTILDPKGKVIVQINAGKPFYGDVDILGTMYSTGYEPIKDAS
GKIIGIWYVGYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 18540; Mature: 18540

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRARFLHLAWTAGFLVAASMFIPTTGYSQTDTKVAKAMADLKAATNKLGTPKLEGMDPV
CCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SGKNAAALYFGKTKVNNDFSVVDAVTRENGGTATLFAKTEDEYVRVSTNVPKGDGRATGT
CCCCEEEEEEECEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEE
ILDPKGKVIVQINAGKPFYGDVDILGTMYSTGYEPIKDASGKIIGIWYVGYKK
EECCCCCEEEEEECCCCCCCCHHHEEHHHHCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNRARFLHLAWTAGFLVAASMFIPTTGYSQTDTKVAKAMADLKAATNKLGTPKLEGMDPV
CCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SGKNAAALYFGKTKVNNDFSVVDAVTRENGGTATLFAKTEDEYVRVSTNVPKGDGRATGT
CCCCEEEEEEECEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEE
ILDPKGKVIVQINAGKPFYGDVDILGTMYSTGYEPIKDASGKIIGIWYVGYKK
EECCCCCEEEEEECCCCCCCCHHHEEHHHHCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921238; 7704255; 8969502; 9384377 [H]