| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is trxA [H]
Identifier: 182679073
GI number: 182679073
Start: 2410513
End: 2410836
Strand: Direct
Name: trxA [H]
Synonym: Bind_2110
Alternate gene names: 182679073
Gene position: 2410513-2410836 (Clockwise)
Preceding gene: 182679072
Following gene: 182679078
Centisome position: 57.8
GC content: 57.41
Gene sequence:
>324_bases ATGCCAAGCCTGAAAGTGACTGACGCTACCTTCGCCCGCGCTGTCATCGACGCGGGCCTTCCCGTTTTTGTGGATTTCTG GGCGGATTGGTGTGGCCCCTGCCACGCTGTCGCCCCTCTTCTCGAAGACCTCGCCGATGAATTGCAAGGCCGGGTTATCG TCGCCAAGCTGAATATCGACGAGAATCCGGATACGACGGCGCTCCAAGACATCCATTCCGTCCCGACTTTCAAAATCTTC AAAAATGGCGAGCTCGCCGCGCAGGATATTGGCGCCTATACCAAGGACGCCCTGCGTGCCTGGATTCTTGAAACGATCGC CTGA
Upstream 100 bases:
>100_bases TTTGCTTATATTTTAAAATTCAAAGCAGCATTGGTTTTGCGTCGAAGGCGAAATCAATCGTGGCTTTAGCCATGCAAGGC CGCTGAGGTTAGAGGCAGAG
Downstream 100 bases:
>100_bases TGAAAGTTCACATTGAGAGCATCGGATGTTTGAGTCCGATGCTCTGTATCCCATTTAGGCCTGATGCGCTGCCCGGATTT CGATCAATTCACGACCGATA
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPSLKVTDATFARAVIDAGLPVFVDFWADWCGPCHAVAPLLEDLADELQGRVIVAKLNIDENPDTTALQDIHSVPTFKIF KNGELAAQDIGAYTKDALRAWILETIA
Sequences:
>Translated_107_residues MPSLKVTDATFARAVIDAGLPVFVDFWADWCGPCHAVAPLLEDLADELQGRVIVAKLNIDENPDTTALQDIHSVPTFKIF KNGELAAQDIGAYTKDALRAWILETIA >Mature_106_residues PSLKVTDATFARAVIDAGLPVFVDFWADWCGPCHAVAPLLEDLADELQGRVIVAKLNIDENPDTTALQDIHSVPTFKIFK NGELAAQDIGAYTKDALRAWILETIA
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=97, Percent_Identity=35.0515463917526, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI21361657, Length=97, Percent_Identity=36.0824742268041, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=46.1538461538462, Blast_Score=107, Evalue=1e-25, Organism=Escherichia coli, GI1788936, Length=87, Percent_Identity=41.3793103448276, Blast_Score=81, Evalue=2e-17, Organism=Caenorhabditis elegans, GI212646193, Length=97, Percent_Identity=39.1752577319588, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71998175, Length=104, Percent_Identity=39.4230769230769, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71980562, Length=86, Percent_Identity=38.3720930232558, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71980565, Length=86, Percent_Identity=38.3720930232558, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323072, Length=71, Percent_Identity=38.0281690140845, Blast_Score=62, Evalue=1e-11, Organism=Drosophila melanogaster, GI28573567, Length=100, Percent_Identity=37, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI24639826, Length=73, Percent_Identity=43.8356164383562, Blast_Score=76, Evalue=3e-15, Organism=Drosophila melanogaster, GI24664269, Length=88, Percent_Identity=39.7727272727273, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI17648013, Length=88, Percent_Identity=37.5, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583090, Length=88, Percent_Identity=37.5, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358065, Length=92, Percent_Identity=33.695652173913, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11665; Mature: 11534
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLKVTDATFARAVIDAGLPVFVDFWADWCGPCHAVAPLLEDLADELQGRVIVAKLNID CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCC ENPDTTALQDIHSVPTFKIFKNGELAAQDIGAYTKDALRAWILETIA CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSLKVTDATFARAVIDAGLPVFVDFWADWCGPCHAVAPLLEDLADELQGRVIVAKLNID CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCC ENPDTTALQDIHSVPTFKIFKNGELAAQDIGAYTKDALRAWILETIA CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]