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The map label for this gene is infC [H]

Identifier: 182679072

GI number: 182679072

Start: 2409694

End: 2410353

Strand: Direct

Name: infC [H]

Synonym: Bind_2109

Alternate gene names: 182679072

Gene position: 2409694-2410353 (Clockwise)

Preceding gene: 182679071

Following gene: 182679073

Centisome position: 57.78

GC content: 56.36

Gene sequence:

>660_bases
ATGACCCGATCTTTTACTGGGCCCTTTCCGTCGAAGCCCCATTACAAGGACAAATTGGGTTCCTTGCCGGGTTTTGCGTC
GCGGACGGGTTCGTTTGACAAGATAGGAGTTTTACCCATTCGCCGTCCCATGAAAGCCCCCGTTGTTCCGCAGAAGGATG
GACCCCGTATCAACCACGACATTCGCGTCCGTGAGATCCAGTTGATCGATGCCGAAGGGCACAATCGCGGGATCGTCCCG
ATTCTAGACGCGCAACGCCTGGCCGACGAGGCTTCACTCGACCTCGTTGAGATCGTGCCCAATGCCACGCCGCCAGTCTG
CAAGATTCTGGATTATGGAAAATTCCGCTTTCTCGAACAAAAGAAAGCCGCCGAGGCCCGCAAGAAACAGAAGATCGTCG
AGATCAAGGAAATCAAGCTGCGGCCCGGCATCGACGAGCATGATTACGACACCAAGATGAAGGCCGTGAAACGGTTCTTC
GAAGAAGGTGACAAGGTCAAGGTCACGCTGCGCTTCCGCGGCCGTGAAATGGCCCATCAGGATCTCGGTTTCCGCCTGCT
CGAACGGGTGAAGTCCGAAACTGGCACTTTCGCGAAGGTCGAGGCGGAACCCTCTATGGAAGGCCGTCAGATGATCATGG
TGCTCGCACCGCGGACGTGA

Upstream 100 bases:

>100_bases
TGTGTCGGGCAACGCTTGATGCCTATGGCTCTCTGTTCCCGAGCGGGGAAGAATAATTAATTCTACTCGGGAAAGAGGTC
TTTATTGACATCTTGCAATA

Downstream 100 bases:

>100_bases
TTTCTCTGCCCTGAGAACAAGGCATCCCGCACAGCCCCTTAAGCAAACTTTTCTCAAAGTTTGCTTATATTTTAAAATTC
AAAGCAGCATTGGTTTTGCG

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTRSFTGPFPSKPHYKDKLGSLPGFASRTGSFDKIGVLPIRRPMKAPVVPQKDGPRINHDIRVREIQLIDAEGHNRGIVP
ILDAQRLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQKKAAEARKKQKIVEIKEIKLRPGIDEHDYDTKMKAVKRFF
EEGDKVKVTLRFRGREMAHQDLGFRLLERVKSETGTFAKVEAEPSMEGRQMIMVLAPRT

Sequences:

>Translated_219_residues
MTRSFTGPFPSKPHYKDKLGSLPGFASRTGSFDKIGVLPIRRPMKAPVVPQKDGPRINHDIRVREIQLIDAEGHNRGIVP
ILDAQRLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQKKAAEARKKQKIVEIKEIKLRPGIDEHDYDTKMKAVKRFF
EEGDKVKVTLRFRGREMAHQDLGFRLLERVKSETGTFAKVEAEPSMEGRQMIMVLAPRT
>Mature_218_residues
TRSFTGPFPSKPHYKDKLGSLPGFASRTGSFDKIGVLPIRRPMKAPVVPQKDGPRINHDIRVREIQLIDAEGHNRGIVPI
LDAQRLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQKKAAEARKKQKIVEIKEIKLRPGIDEHDYDTKMKAVKRFFE
EGDKVKVTLRFRGREMAHQDLGFRLLERVKSETGTFAKVEAEPSMEGRQMIMVLAPRT

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=164, Percent_Identity=56.0975609756098, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 24900; Mature: 24769

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSFTGPFPSKPHYKDKLGSLPGFASRTGSFDKIGVLPIRRPMKAPVVPQKDGPRINHD
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEECEECCCCCCCCCCCCCCCCCCCCC
IRVREIQLIDAEGHNRGIVPILDAQRLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQ
EEEEEEEEEECCCCCCCEEEEECHHHHHHHHCCCEEEECCCCCCCHHHHHCCCHHHHHHH
KKAAEARKKQKIVEIKEIKLRPGIDEHDYDTKMKAVKRFFEEGDKVKVTLRFRGREMAHQ
HHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHH
DLGFRLLERVKSETGTFAKVEAEPSMEGRQMIMVLAPRT
HHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TRSFTGPFPSKPHYKDKLGSLPGFASRTGSFDKIGVLPIRRPMKAPVVPQKDGPRINHD
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEECEECCCCCCCCCCCCCCCCCCCCC
IRVREIQLIDAEGHNRGIVPILDAQRLADEASLDLVEIVPNATPPVCKILDYGKFRFLEQ
EEEEEEEEEECCCCCCCEEEEECHHHHHHHHCCCEEEECCCCCCCHHHHHCCCHHHHHHH
KKAAEARKKQKIVEIKEIKLRPGIDEHDYDTKMKAVKRFFEEGDKVKVTLRFRGREMAHQ
HHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHH
DLGFRLLERVKSETGTFAKVEAEPSMEGRQMIMVLAPRT
HHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA