| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679071
Identifier: 182679071
GI number: 182679071
Start: 2408315
End: 2409649
Strand: Direct
Name: 182679071
Synonym: Bind_2108
Alternate gene names: NA
Gene position: 2408315-2409649 (Clockwise)
Preceding gene: 182679068
Following gene: 182679072
Centisome position: 57.75
GC content: 63.67
Gene sequence:
>1335_bases ATGCGCCAGCCCCTGTTCCCTCCCCTGCTCGATCGCGCAAGGCATCCGCTGAACCGCCGAACCGTGCTGCAAATCGTCCC CAGCCTCGTGGGCGGCGACACAGAGCATATCGCCCTCGAAATCGCGGCCGCGATTACCGAGGCAGGTGGCAAGGCCCTCG TTGCCAGCGAGGGGGGACGGCTGGTCAGTTCGTTGCAGGCCATGGGCGGGCTCTGGATCCCTTTCCCTGCCGCCTCGCGC GATCCGCTCGCCATGCTGCTCAACATACGTAAGCTCGCCCGCCTGATCGAAATGGAAAAAGTGGATCTCGTCCACGCCCA TTCGCGGGCCTCCGCCTGGGTTGCCTATGGCGCGACACGGCGGACCAAAACGCCTTTCGTCACCACCTTCCACAGTGGCT ATACCGAAGGCATCGGCTTACAGCAGCGGTATAATTCCGTCATGGCGCGGGGTGATTGCATTATCGCCCATTCCCATTAT AGCGCGCGGCGGATCGAGGCCCGCTATCCACAGGCTCGGACCCGGATCAAGGTCATCCCCCAAGGTATCGATTTCCAGGT TTTCGCCCCTCAGAGTGTCGATCCCGCCCGGGTTCAGGCTCTGCGACAGGCCTGGGGCATTACACCGGATCAACGAGCGG TGCTTTTGACCGACCCTTTTTCCGATCTCTCAAGGGAGGATGGCGGCGGGACGGATGAGCCGCCCTTCATTGAGGCAGCC CGCCTCCTTCGCGCCCAAAACCTCGAAGGGGTCGTTTTCATCCTGACTGGCGATGCCACGCCGCCTTTGGGGCGCGGCCA GGAGAGGGGTCGCGAACAAGATCAAGACAAAATTCAGGAGCATGGCGGCAGCAGCGCGCGGATCAAGATCCTGACCAATA GCCAAGCCGCCAAGGATTTCGATCGCAAGATCAGCGCTGCCGGCCTCTCCGGCATCATGCGACGCGCCAAGAGGGAGGCC GATCTTCCAGCCGCCTTGCTTGCGAGCGCCGCTGTCGTCGCGCCTATCGCACGGCCCGGAGGATTCGGTCCCCTCGCCAT TGCAGCCCAAGCGATGGGCACTCCGATGATCCTCCCGGCTTTGGGTGCCGCGCCAGAAATCATTCTGGCGCCGCCGCAGG TCGATCAAGCGGAGCGCACCGGTTGGCTGGTGCCGCCAGGCAATGCCGCGGCGCTGGCCGCGACGCTCGGCGAGGTCCTT TCGCTCGGCGCCACGGCACGCGGCCTGCTTGGAGAACGTGGCCGGCGTCATGTCGAGGCCCATTTCTCACTCGATGAAAT GTGTCGGGCAACGCTTGATGCCTATGGCTCTCTGTTCCCGAGCGGGGAAGAATAA
Upstream 100 bases:
>100_bases GTGAATTAATCCGCTTTGTCTTTACTCAAGAATTGTCTTCCCATCGCCGATTTCGTTACATCTATCGGACATTCGTCATG ACGGTCGACACCTGCCCCTG
Downstream 100 bases:
>100_bases TTAATTCTACTCGGGAAAGAGGTCTTTATTGACATCTTGCAATAATGACCCGATCTTTTACTGGGCCCTTTCCGTCGAAG CCCCATTACAAGGACAAATT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Glycosyltransferase Protein; Lipopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MRQPLFPPLLDRARHPLNRRTVLQIVPSLVGGDTEHIALEIAAAITEAGGKALVASEGGRLVSSLQAMGGLWIPFPAASR DPLAMLLNIRKLARLIEMEKVDLVHAHSRASAWVAYGATRRTKTPFVTTFHSGYTEGIGLQQRYNSVMARGDCIIAHSHY SARRIEARYPQARTRIKVIPQGIDFQVFAPQSVDPARVQALRQAWGITPDQRAVLLTDPFSDLSREDGGGTDEPPFIEAA RLLRAQNLEGVVFILTGDATPPLGRGQERGREQDQDKIQEHGGSSARIKILTNSQAAKDFDRKISAAGLSGIMRRAKREA DLPAALLASAAVVAPIARPGGFGPLAIAAQAMGTPMILPALGAAPEIILAPPQVDQAERTGWLVPPGNAAALAATLGEVL SLGATARGLLGERGRRHVEAHFSLDEMCRATLDAYGSLFPSGEE
Sequences:
>Translated_444_residues MRQPLFPPLLDRARHPLNRRTVLQIVPSLVGGDTEHIALEIAAAITEAGGKALVASEGGRLVSSLQAMGGLWIPFPAASR DPLAMLLNIRKLARLIEMEKVDLVHAHSRASAWVAYGATRRTKTPFVTTFHSGYTEGIGLQQRYNSVMARGDCIIAHSHY SARRIEARYPQARTRIKVIPQGIDFQVFAPQSVDPARVQALRQAWGITPDQRAVLLTDPFSDLSREDGGGTDEPPFIEAA RLLRAQNLEGVVFILTGDATPPLGRGQERGREQDQDKIQEHGGSSARIKILTNSQAAKDFDRKISAAGLSGIMRRAKREA DLPAALLASAAVVAPIARPGGFGPLAIAAQAMGTPMILPALGAAPEIILAPPQVDQAERTGWLVPPGNAAALAATLGEVL SLGATARGLLGERGRRHVEAHFSLDEMCRATLDAYGSLFPSGEE >Mature_444_residues MRQPLFPPLLDRARHPLNRRTVLQIVPSLVGGDTEHIALEIAAAITEAGGKALVASEGGRLVSSLQAMGGLWIPFPAASR DPLAMLLNIRKLARLIEMEKVDLVHAHSRASAWVAYGATRRTKTPFVTTFHSGYTEGIGLQQRYNSVMARGDCIIAHSHY SARRIEARYPQARTRIKVIPQGIDFQVFAPQSVDPARVQALRQAWGITPDQRAVLLTDPFSDLSREDGGGTDEPPFIEAA RLLRAQNLEGVVFILTGDATPPLGRGQERGREQDQDKIQEHGGSSARIKILTNSQAAKDFDRKISAAGLSGIMRRAKREA DLPAALLASAAVVAPIARPGGFGPLAIAAQAMGTPMILPALGAAPEIILAPPQVDQAERTGWLVPPGNAAALAATLGEVL SLGATARGLLGERGRRHVEAHFSLDEMCRATLDAYGSLFPSGEE
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47558; Mature: 47558
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPLFPPLLDRARHPLNRRTVLQIVPSLVGGDTEHIALEIAAAITEAGGKALVASEGGR CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCH LVSSLQAMGGLWIPFPAASRDPLAMLLNIRKLARLIEMEKVDLVHAHSRASAWVAYGATR HHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC RTKTPFVTTFHSGYTEGIGLQQRYNSVMARGDCIIAHSHYSARRIEARYPQARTRIKVIP CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCHHCEEEEEC QGIDFQVFAPQSVDPARVQALRQAWGITPDQRAVLLTDPFSDLSREDGGGTDEPPFIEAA CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHH RLLRAQNLEGVVFILTGDATPPLGRGQERGREQDQDKIQEHGGSSARIKILTNSQAAKDF HHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHCCCCCEEEEEEECCHHHHHH DRKISAAGLSGIMRRAKREADLPAALLASAAVVAPIARPGGFGPLAIAAQAMGTPMILPA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECC LGAAPEIILAPPQVDQAERTGWLVPPGNAAALAATLGEVLSLGATARGLLGERGRRHVEA CCCCCCEEECCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHE HFSLDEMCRATLDAYGSLFPSGEE CCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRQPLFPPLLDRARHPLNRRTVLQIVPSLVGGDTEHIALEIAAAITEAGGKALVASEGGR CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCH LVSSLQAMGGLWIPFPAASRDPLAMLLNIRKLARLIEMEKVDLVHAHSRASAWVAYGATR HHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC RTKTPFVTTFHSGYTEGIGLQQRYNSVMARGDCIIAHSHYSARRIEARYPQARTRIKVIP CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCHHCEEEEEC QGIDFQVFAPQSVDPARVQALRQAWGITPDQRAVLLTDPFSDLSREDGGGTDEPPFIEAA CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHH RLLRAQNLEGVVFILTGDATPPLGRGQERGREQDQDKIQEHGGSSARIKILTNSQAAKDF HHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHCCCCCEEEEEEECCHHHHHH DRKISAAGLSGIMRRAKREADLPAALLASAAVVAPIARPGGFGPLAIAAQAMGTPMILPA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECC LGAAPEIILAPPQVDQAERTGWLVPPGNAAALAATLGEVLSLGATARGLLGERGRRHVEA CCCCCCEEECCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHE HFSLDEMCRATLDAYGSLFPSGEE CCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA