| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679040
Identifier: 182679040
GI number: 182679040
Start: 2375021
End: 2376433
Strand: Direct
Name: 182679040
Synonym: Bind_2076
Alternate gene names: NA
Gene position: 2375021-2376433 (Clockwise)
Preceding gene: 182679039
Following gene: 182679041
Centisome position: 56.95
GC content: 58.53
Gene sequence:
>1413_bases ATGACCGTTTTTCTGGCTTTTCTGTGCAATATTCTCTTCAATTTCGCGATTGGCCTGCTGATCGCGAAATTCCTCGGGCC GGAGGAATATGGCCGTTTCGCTCTGTCGCATGCGACGGCCATCGCTGTGCAGACGGCTTTCTTCGATTGGATTCGCCTCG GCGCAACGCGTTTTTATTCGCAACGTTCGCAACACGAAAATCCGGCCCTACGGCCAACCCTCGATGTCTCGTTCAGCCTG ATCGGCTGCGCCATCGCGATCGGTGGTGGCCTTCTCATGCTGTCGGGGGTGCATTTCACCCTTTCCAACCCTTTCATCGG CCTGGCGCTCGCTATTGCCATTGCCAATGGCCTCTTCGATTATCATGCGGCTTTGGCCCGGGCCCGTTTCCACGATCAGC ATTATGTCCGGCTGATTCTGGTCAAGACGTTCCTCGGCGCCCTGCTGATGGGCGGCGCCGCCTTCTGGTTCAATTCCGCC ATGCTCACCCTCGTCGGGGCCACATTGAGCCTTGGCGGAGCGGTCCTGGCGGCACGCAGCGGCTTGCCAGCCGGTGAGAC CTGCCAAGCCTTGCCACAGTTTGCCACGGCAAGTGCGCTGGTGCGCTATAGCCTGCCAATCGTCTGCGCCAATCTGCTCT ATCTTTCGATTCCCCTAGCCAACCGCTCCTTGATCGCGATTTTTTACGGTTTTTCAGAAACCGGACAATTCTCCCTGGCC TTCGATTTCGGCACCAAGGCCATACAGGCCATTGGCTCAGCGCTCGATGTCGTTCTCTTCCAGATCGCCGTCGCGACCCA TGAATTGCTGGGGCCGAGCCACGGCCGGCAACGGCTCGCCAATAATATAGCAATCATTTTCTCAGTGGTGCTCGCCTCCT GTACCGGCCTTTGGCTCACATTGCCATCGATCGAGGGCATGATTGTCCCAAACGATTTTCGCGGTCCCTTTTATATGCTG CTGCCCTTGATGCTGACCGGACTGTTTTGCTCGGCGCTCATCCAATTCGCTATCACACCGATTTTTCAAATCGAGAAAAG AACCGTGCCGCTGATCGCCGCTGCTTTCATCGGCTGTCTCGTTGATCCCATTTTAGTCTATGTCCTGCCGCGTAATCCTG ATGCGTCCAGCCTCGCCATCGCCCAGGCTGGCGCCATGCTGGCGGCACTGATCGCGCTCATCACCTTCGCTGCTTTCACC AAACCGCAATGGCCGCGCTGGCGCGATCTCGCCATTGCCATGCTGGCCACGGCCCTGATGTCGGCGGCCTTGCTGCCGCT GCGCTCGCGCGAGCCGGGCCTTGCGACGCTGACCTTGCAGATCGGCATAGGTCTTCTCGTCTATGCCACCGTCACGCTTA GCCTCGATTTCGCCGGCCTGCGCGGCATCATCATGGCCCGATTGCGGACTTGA
Upstream 100 bases:
>100_bases ATCGTCACACAAGGAACGTAAAGGACATCTTATTCCCGATCCACGCTGGCGTTCATCGTGACCACCAGCCTGCGAGATTC CATTTGGTTTTTCCCGGTTC
Downstream 100 bases:
>100_bases TGTGTAGACATCGCATTTTTTCTATACATTCTCATTCCATGTTCGAACGACAGGGGATTTGACATGAGTTCCTATTGGTA TTCACTGGCTGGAGGCCTGT
Product: O-antigen and teichoic acid-like protein export membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTVFLAFLCNILFNFAIGLLIAKFLGPEEYGRFALSHATAIAVQTAFFDWIRLGATRFYSQRSQHENPALRPTLDVSFSL IGCAIAIGGGLLMLSGVHFTLSNPFIGLALAIAIANGLFDYHAALARARFHDQHYVRLILVKTFLGALLMGGAAFWFNSA MLTLVGATLSLGGAVLAARSGLPAGETCQALPQFATASALVRYSLPIVCANLLYLSIPLANRSLIAIFYGFSETGQFSLA FDFGTKAIQAIGSALDVVLFQIAVATHELLGPSHGRQRLANNIAIIFSVVLASCTGLWLTLPSIEGMIVPNDFRGPFYML LPLMLTGLFCSALIQFAITPIFQIEKRTVPLIAAAFIGCLVDPILVYVLPRNPDASSLAIAQAGAMLAALIALITFAAFT KPQWPRWRDLAIAMLATALMSAALLPLRSREPGLATLTLQIGIGLLVYATVTLSLDFAGLRGIIMARLRT
Sequences:
>Translated_470_residues MTVFLAFLCNILFNFAIGLLIAKFLGPEEYGRFALSHATAIAVQTAFFDWIRLGATRFYSQRSQHENPALRPTLDVSFSL IGCAIAIGGGLLMLSGVHFTLSNPFIGLALAIAIANGLFDYHAALARARFHDQHYVRLILVKTFLGALLMGGAAFWFNSA MLTLVGATLSLGGAVLAARSGLPAGETCQALPQFATASALVRYSLPIVCANLLYLSIPLANRSLIAIFYGFSETGQFSLA FDFGTKAIQAIGSALDVVLFQIAVATHELLGPSHGRQRLANNIAIIFSVVLASCTGLWLTLPSIEGMIVPNDFRGPFYML LPLMLTGLFCSALIQFAITPIFQIEKRTVPLIAAAFIGCLVDPILVYVLPRNPDASSLAIAQAGAMLAALIALITFAAFT KPQWPRWRDLAIAMLATALMSAALLPLRSREPGLATLTLQIGIGLLVYATVTLSLDFAGLRGIIMARLRT >Mature_469_residues TVFLAFLCNILFNFAIGLLIAKFLGPEEYGRFALSHATAIAVQTAFFDWIRLGATRFYSQRSQHENPALRPTLDVSFSLI GCAIAIGGGLLMLSGVHFTLSNPFIGLALAIAIANGLFDYHAALARARFHDQHYVRLILVKTFLGALLMGGAAFWFNSAM LTLVGATLSLGGAVLAARSGLPAGETCQALPQFATASALVRYSLPIVCANLLYLSIPLANRSLIAIFYGFSETGQFSLAF DFGTKAIQAIGSALDVVLFQIAVATHELLGPSHGRQRLANNIAIIFSVVLASCTGLWLTLPSIEGMIVPNDFRGPFYMLL PLMLTGLFCSALIQFAITPIFQIEKRTVPLIAAAFIGCLVDPILVYVLPRNPDASSLAIAQAGAMLAALIALITFAAFTK PQWPRWRDLAIAMLATALMSAALLPLRSREPGLATLTLQIGIGLLVYATVTLSLDFAGLRGIIMARLRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50354; Mature: 50223
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFLAFLCNILFNFAIGLLIAKFLGPEEYGRFALSHATAIAVQTAFFDWIRLGATRFYS CEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRSQHENPALRPTLDVSFSLIGCAIAIGGGLLMLSGVHFTLSNPFIGLALAIAIANGLFD HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHH YHAALARARFHDQHYVRLILVKTFLGALLMGGAAFWFNSAMLTLVGATLSLGGAVLAARS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHCC GLPAGETCQALPQFATASALVRYSLPIVCANLLYLSIPLANRSLIAIFYGFSETGQFSLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEE FDFGTKAIQAIGSALDVVLFQIAVATHELLGPSHGRQRLANNIAIIFSVVLASCTGLWLT EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE LPSIEGMIVPNDFRGPFYMLLPLMLTGLFCSALIQFAITPIFQIEKRTVPLIAAAFIGCL ECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHH VDPILVYVLPRNPDASSLAIAQAGAMLAALIALITFAAFTKPQWPRWRDLAIAMLATALM HHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SAALLPLRSREPGLATLTLQIGIGLLVYATVTLSLDFAGLRGIIMARLRT HHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCC >Mature Secondary Structure TVFLAFLCNILFNFAIGLLIAKFLGPEEYGRFALSHATAIAVQTAFFDWIRLGATRFYS EEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRSQHENPALRPTLDVSFSLIGCAIAIGGGLLMLSGVHFTLSNPFIGLALAIAIANGLFD HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHH YHAALARARFHDQHYVRLILVKTFLGALLMGGAAFWFNSAMLTLVGATLSLGGAVLAARS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHCC GLPAGETCQALPQFATASALVRYSLPIVCANLLYLSIPLANRSLIAIFYGFSETGQFSLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEE FDFGTKAIQAIGSALDVVLFQIAVATHELLGPSHGRQRLANNIAIIFSVVLASCTGLWLT EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE LPSIEGMIVPNDFRGPFYMLLPLMLTGLFCSALIQFAITPIFQIEKRTVPLIAAAFIGCL ECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHH VDPILVYVLPRNPDASSLAIAQAGAMLAALIALITFAAFTKPQWPRWRDLAIAMLATALM HHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SAALLPLRSREPGLATLTLQIGIGLLVYATVTLSLDFAGLRGIIMARLRT HHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA