| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679028
Identifier: 182679028
GI number: 182679028
Start: 2359162
End: 2360298
Strand: Direct
Name: 182679028
Synonym: Bind_2064
Alternate gene names: NA
Gene position: 2359162-2360298 (Clockwise)
Preceding gene: 182679025
Following gene: 182679030
Centisome position: 56.57
GC content: 60.25
Gene sequence:
>1137_bases ATGTCCCATCAGGAAGAGGCGCTGAATGAAGCGCTGGCGAGCCTTGGCTTGCGCCGTTTCGAGATTCCCCCGGCCAAAAT TTTAACCACTGGTTTCGTGAGCGTCTTTCAGGTCGTATCGGACCGCTGCTATGCCCGGCTCGCCAGCATGGCCGATGAAT ATGAGGCTCCGGGCTCCGTCGCCTTCGGTTTCGCCGAACATCGGGAATTCAATGCCTTCGCCCAGCGCGGCCGCATGGAT GTAATCGGCTTCTACACGACCGTCGTGCGCGTCATGTGGAGCGTCACCAACGCCATGATGGGCATAAGGGAAATGTTCCC CTGGATCGATGATGTGGATCAATTGGGCGAGGAACAGGCCCCGCATGCCAATGGCGAACTCTTCTTCGTGCGCCCGCCGG ATCAGCCCGCCCCCAATTTCGAGCCGGTCCGTGGACGCCTCGCCACGGCTCTCTTCGATGTCGCGATGGATTTCACCTTG ATGCACGAACTCGCGCATCTGTGGAACGGCCATGTCGAACTGCTGCATCGCATGAGCCCGAAGCCGATCCAGGAAATGCA CCTGAATGAGGGCGAATGCCTCGATCTGCCGCTCATGCAGGCGTTGGAATTCGACGCCGATTCCTTCGCCATCCAGAAAG TCTTCGCGCGCGTCCATCGTGAAAATCCGTTTCAAGATTTCACCAAGGGCCTGTTGAAGGACCATGCGCTGCCGGCCGAT GGCGCGCATACAGCGTCCTGGTTTTTCACTTGGGTCGCAATCTACGCTCTGTTCAGATCCTATGACGAAGCGAGTGCTTG CGCCGACATCACCCGCCGCTCGCAGCCGCCAGCAGCCTTACGCCAAGCCTGTCTGCTGCCAACCGTCGCGGCGGTCGCCA AGCGGCAAGGCTGGTCGGACCTCTCCATGGATGCCTGGATGACCCATGCCACCATGGCTGGCCTCGAAGCCGAAAGCGCC ATCTGTCGCCTGCGTCGCCTGCCCTTGGACTCGGACTCCTATCGCCTGGCTTGGCAGGGTCCGGCCTTCGATCAGATCGA AAAATATCTGGGGGTGTGGGAACAGCTCGGACCAATGCTGGCGGATACAAAGCGCGGGCCTATGGAGCCAGAGGATGCGC CCGTTGTAGCGGCTTAG
Upstream 100 bases:
>100_bases AGTTGCTTGGGATAGAAAGCGCAGCTGGCTGAACTTTTTCGGATGCCAAGCGGCCCGACCAAAGATAGAAGTGGCGCACG ATCAAAAGGCACGAAATCCC
Downstream 100 bases:
>100_bases AACCGTCATTGGCGTAGACTGGGCAACCTAGAGCGCCAAACCATCCCCACATGTTATAGAATTGTGGGTCATGTCAGGCC TTTCCCGAAACTGCCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSHQEEALNEALASLGLRRFEIPPAKILTTGFVSVFQVVSDRCYARLASMADEYEAPGSVAFGFAEHREFNAFAQRGRMD VIGFYTTVVRVMWSVTNAMMGIREMFPWIDDVDQLGEEQAPHANGELFFVRPPDQPAPNFEPVRGRLATALFDVAMDFTL MHELAHLWNGHVELLHRMSPKPIQEMHLNEGECLDLPLMQALEFDADSFAIQKVFARVHRENPFQDFTKGLLKDHALPAD GAHTASWFFTWVAIYALFRSYDEASACADITRRSQPPAALRQACLLPTVAAVAKRQGWSDLSMDAWMTHATMAGLEAESA ICRLRRLPLDSDSYRLAWQGPAFDQIEKYLGVWEQLGPMLADTKRGPMEPEDAPVVAA
Sequences:
>Translated_378_residues MSHQEEALNEALASLGLRRFEIPPAKILTTGFVSVFQVVSDRCYARLASMADEYEAPGSVAFGFAEHREFNAFAQRGRMD VIGFYTTVVRVMWSVTNAMMGIREMFPWIDDVDQLGEEQAPHANGELFFVRPPDQPAPNFEPVRGRLATALFDVAMDFTL MHELAHLWNGHVELLHRMSPKPIQEMHLNEGECLDLPLMQALEFDADSFAIQKVFARVHRENPFQDFTKGLLKDHALPAD GAHTASWFFTWVAIYALFRSYDEASACADITRRSQPPAALRQACLLPTVAAVAKRQGWSDLSMDAWMTHATMAGLEAESA ICRLRRLPLDSDSYRLAWQGPAFDQIEKYLGVWEQLGPMLADTKRGPMEPEDAPVVAA >Mature_377_residues SHQEEALNEALASLGLRRFEIPPAKILTTGFVSVFQVVSDRCYARLASMADEYEAPGSVAFGFAEHREFNAFAQRGRMDV IGFYTTVVRVMWSVTNAMMGIREMFPWIDDVDQLGEEQAPHANGELFFVRPPDQPAPNFEPVRGRLATALFDVAMDFTLM HELAHLWNGHVELLHRMSPKPIQEMHLNEGECLDLPLMQALEFDADSFAIQKVFARVHRENPFQDFTKGLLKDHALPADG AHTASWFFTWVAIYALFRSYDEASACADITRRSQPPAALRQACLLPTVAAVAKRQGWSDLSMDAWMTHATMAGLEAESAI CRLRRLPLDSDSYRLAWQGPAFDQIEKYLGVWEQLGPMLADTKRGPMEPEDAPVVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42463; Mature: 42332
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQEEALNEALASLGLRRFEIPPAKILTTGFVSVFQVVSDRCYARLASMADEYEAPGSV CCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE AFGFAEHREFNAFAQRGRMDVIGFYTTVVRVMWSVTNAMMGIREMFPWIDDVDQLGEEQA EECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC PHANGELFFVRPPDQPAPNFEPVRGRLATALFDVAMDFTLMHELAHLWNGHVELLHRMSP CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KPIQEMHLNEGECLDLPLMQALEFDADSFAIQKVFARVHRENPFQDFTKGLLKDHALPAD CCHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC GAHTASWFFTWVAIYALFRSYDEASACADITRRSQPPAALRQACLLPTVAAVAKRQGWSD CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC LSMDAWMTHATMAGLEAESAICRLRRLPLDSDSYRLAWQGPAFDQIEKYLGVWEQLGPML CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHH ADTKRGPMEPEDAPVVAA HCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHQEEALNEALASLGLRRFEIPPAKILTTGFVSVFQVVSDRCYARLASMADEYEAPGSV CCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE AFGFAEHREFNAFAQRGRMDVIGFYTTVVRVMWSVTNAMMGIREMFPWIDDVDQLGEEQA EECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC PHANGELFFVRPPDQPAPNFEPVRGRLATALFDVAMDFTLMHELAHLWNGHVELLHRMSP CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KPIQEMHLNEGECLDLPLMQALEFDADSFAIQKVFARVHRENPFQDFTKGLLKDHALPAD CCHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC GAHTASWFFTWVAIYALFRSYDEASACADITRRSQPPAALRQACLLPTVAAVAKRQGWSD CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC LSMDAWMTHATMAGLEAESAICRLRRLPLDSDSYRLAWQGPAFDQIEKYLGVWEQLGPML CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHH ADTKRGPMEPEDAPVVAA HCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA