Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is epsJ [H]

Identifier: 182679013

GI number: 182679013

Start: 2339212

End: 2340873

Strand: Reverse

Name: epsJ [H]

Synonym: Bind_2048

Alternate gene names: 182679013

Gene position: 2340873-2339212 (Counterclockwise)

Preceding gene: 182679014

Following gene: 182679009

Centisome position: 56.13

GC content: 44.83

Gene sequence:

>1662_bases
GTGGCCATTTTAGAACATATTCCGGATTTGGAAAAATGTGTCGCCAAGATCGATGATCTCCTTCGGCCAGACGGCGTCGC
CTATTTGCAGGGTTGTCCCTTATGGGCAGGATCTCATGGCCATCATGTATGGGTGCTGAAGGAAGAAGGAGATTATGATT
CCGAGCTTACGCCTGAGATTGAAAATCGGACAAACGGACCCCTTTTCAGCTTTGTCGAAAAAGACAAAAATCCGATACCT
CATTGGGCGCATCTTGTTTTGACGCCGGATAGTCTCACTGAATTTCTGACAAAAGAAAATGTATCGGAGTCTCATGCACG
GAGAATTATCAATTTTGTCTATAATGTCGATGGGACGATGATCGGATGCTGCTCGAACTTCAAATCGGCCAGTGAAATCA
TCAAGACATTTCAGACAAAATTTATCGTGGATGCAGAGCGTATTCCAAGTGCTCATCCCAATGAATATTTTACTGCCGCC
AGAAAAAAATATTCGTATTGGGATTTGCAAACACATGGCCTGATGCTTTGGCTTAAGCCAAAATCATATATGCTGGAACG
CGTCCGGGAACCTGATCCCAAAGTGTCTGTTATTGTGCCTTTCTACAAGGTTGAGGACTATCTGGGGGAGTGTATCGAAA
GCATCATTCGCCAAGATTATAAAAACATCGAAATTATTTTGGTTGATGACGCTTCTCCCGATGGCTCCCGTGGGATTGCC
CAACGTTTTGCGGCAAAGGATTCAAGGATCCGTGTTCTGACCCATGAGAAAAACGAAGGCCTCGGTCCGGCGAGAAATAC
GGGGGTCCATCATGCGACAGGCTTTTATGTTTTTTTCCTGGATTCGGATGATCTTCTGCATTCCTCTCAAGCAATTGGTA
AACTTGTCTCTGCAGCACAAAGCCATAGCAACTGCCCGGTCGTCGTTGGTGGATGCGTCCGGTTGATGGCCAATGGCAAG
ATTCAGCCCGTCGATCATATTGATGATAGAGGCGGCTTAAATAAATCAGGCGGCGTGGTGCATGGCGTCGAAGCGTTTCT
CGCAGGTGTGCGATTACCGAATGCCTATTATTTGCCACCAAGAGCCTGGGGAGCTCTGATCGAACGAACCTTTTATGAAA
ACCTGATGCTAGACTTCCCATCTGGCGAACATGAAGATCTTGTTCATACACCTTTCCTTTATTTTCTCGCTGACAATGTT
CTCTATGTAAAAGATATTGTCGTGACTTATCGATACCGTGACTGCAGTATTTCCAATGCGCGATGGACACCGGAAATGGT
TCGGCGCTACGGAGATCTTTGGCGCAATTTTAAATCAATTGCTTTGCGTCGTGGGCTTGAAAATTATTTGGGAGATTGCG
CATTCAAATTTATTTATCATTTGATTTGGAGAATGCGGAACAATTCGTTCGATGATGACTCCAGGACAGAGGTCCTTAAC
TTAGTGGGAAATATGTTTCAGGATGTAGAGAATGTCACATACAAGCATGAGTTTTATCGCTCGATGAACTCTGTTCGTAA
ATTCGTTGGTGGCACCTTTCGTCGGGATAAATATTATGAATGGTTGACCAAATCGTTGCCGGAGGACTTAGTTCTGGATT
ATTATCGCAATCATAGTGTTTTAGGGCGTTTGTCGTTTGGTCAGTGGTTACGATGGTTTTGA

Upstream 100 bases:

>100_bases
TTGTATTTCCGATGAGCCTCTGCCGAAAAACGTTGAGTTTTTTGCAGGGGATGTTGGGGACATCGGATTTGACAAAAAGT
GTTTTGATATTGTCTACGGC

Downstream 100 bases:

>100_bases
AAAGGCGGCGAATACGGTGTAGAGGATTGCTCCCTTTGATTGGCGAGGTGTCGCGATAATTCGATGCTTGCCGTTAACAC
GGCCAGGCGTTGGTGAAATC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MAILEHIPDLEKCVAKIDDLLRPDGVAYLQGCPLWAGSHGHHVWVLKEEGDYDSELTPEIENRTNGPLFSFVEKDKNPIP
HWAHLVLTPDSLTEFLTKENVSESHARRIINFVYNVDGTMIGCCSNFKSASEIIKTFQTKFIVDAERIPSAHPNEYFTAA
RKKYSYWDLQTHGLMLWLKPKSYMLERVREPDPKVSVIVPFYKVEDYLGECIESIIRQDYKNIEIILVDDASPDGSRGIA
QRFAAKDSRIRVLTHEKNEGLGPARNTGVHHATGFYVFFLDSDDLLHSSQAIGKLVSAAQSHSNCPVVVGGCVRLMANGK
IQPVDHIDDRGGLNKSGGVVHGVEAFLAGVRLPNAYYLPPRAWGALIERTFYENLMLDFPSGEHEDLVHTPFLYFLADNV
LYVKDIVVTYRYRDCSISNARWTPEMVRRYGDLWRNFKSIALRRGLENYLGDCAFKFIYHLIWRMRNNSFDDDSRTEVLN
LVGNMFQDVENVTYKHEFYRSMNSVRKFVGGTFRRDKYYEWLTKSLPEDLVLDYYRNHSVLGRLSFGQWLRWF

Sequences:

>Translated_553_residues
MAILEHIPDLEKCVAKIDDLLRPDGVAYLQGCPLWAGSHGHHVWVLKEEGDYDSELTPEIENRTNGPLFSFVEKDKNPIP
HWAHLVLTPDSLTEFLTKENVSESHARRIINFVYNVDGTMIGCCSNFKSASEIIKTFQTKFIVDAERIPSAHPNEYFTAA
RKKYSYWDLQTHGLMLWLKPKSYMLERVREPDPKVSVIVPFYKVEDYLGECIESIIRQDYKNIEIILVDDASPDGSRGIA
QRFAAKDSRIRVLTHEKNEGLGPARNTGVHHATGFYVFFLDSDDLLHSSQAIGKLVSAAQSHSNCPVVVGGCVRLMANGK
IQPVDHIDDRGGLNKSGGVVHGVEAFLAGVRLPNAYYLPPRAWGALIERTFYENLMLDFPSGEHEDLVHTPFLYFLADNV
LYVKDIVVTYRYRDCSISNARWTPEMVRRYGDLWRNFKSIALRRGLENYLGDCAFKFIYHLIWRMRNNSFDDDSRTEVLN
LVGNMFQDVENVTYKHEFYRSMNSVRKFVGGTFRRDKYYEWLTKSLPEDLVLDYYRNHSVLGRLSFGQWLRWF
>Mature_552_residues
AILEHIPDLEKCVAKIDDLLRPDGVAYLQGCPLWAGSHGHHVWVLKEEGDYDSELTPEIENRTNGPLFSFVEKDKNPIPH
WAHLVLTPDSLTEFLTKENVSESHARRIINFVYNVDGTMIGCCSNFKSASEIIKTFQTKFIVDAERIPSAHPNEYFTAAR
KKYSYWDLQTHGLMLWLKPKSYMLERVREPDPKVSVIVPFYKVEDYLGECIESIIRQDYKNIEIILVDDASPDGSRGIAQ
RFAAKDSRIRVLTHEKNEGLGPARNTGVHHATGFYVFFLDSDDLLHSSQAIGKLVSAAQSHSNCPVVVGGCVRLMANGKI
QPVDHIDDRGGLNKSGGVVHGVEAFLAGVRLPNAYYLPPRAWGALIERTFYENLMLDFPSGEHEDLVHTPFLYFLADNVL
YVKDIVVTYRYRDCSISNARWTPEMVRRYGDLWRNFKSIALRRGLENYLGDCAFKFIYHLIWRMRNNSFDDDSRTEVLNL
VGNMFQDVENVTYKHEFYRSMNSVRKFVGGTFRRDKYYEWLTKSLPEDLVLDYYRNHSVLGRLSFGQWLRWF

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=233, Percent_Identity=28.3261802575107, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1787259, Length=100, Percent_Identity=36, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 63720; Mature: 63589

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILEHIPDLEKCVAKIDDLLRPDGVAYLQGCPLWAGSHGHHVWVLKEEGDYDSELTPEI
CCHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCC
ENRTNGPLFSFVEKDKNPIPHWAHLVLTPDSLTEFLTKENVSESHARRIINFVYNVDGTM
CCCCCCCHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE
IGCCSNFKSASEIIKTFQTKFIVDAERIPSAHPNEYFTAARKKYSYWDLQTHGLMLWLKP
EEHHHCHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHHHCCCEEEEEECCEEEEECC
KSYMLERVREPDPKVSVIVPFYKVEDYLGECIESIIRQDYKNIEIILVDDASPDGSRGIA
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHH
QRFAAKDSRIRVLTHEKNEGLGPARNTGVHHATGFYVFFLDSDDLLHSSQAIGKLVSAAQ
HHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECEEEEEEECCCHHHHHHHHHHHHHHHHH
SHSNCPVVVGGCVRLMANGKIQPVDHIDDRGGLNKSGGVVHGVEAFLAGVRLPNAYYLPP
CCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCC
RAWGALIERTFYENLMLDFPSGEHEDLVHTPFLYFLADNVLYVKDIVVTYRYRDCSISNA
HHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCCC
RWTPEMVRRYGDLWRNFKSIALRRGLENYLGDCAFKFIYHLIWRMRNNSFDDDSRTEVLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LVGNMFQDVENVTYKHEFYRSMNSVRKFVGGTFRRDKYYEWLTKSLPEDLVLDYYRNHSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
LGRLSFGQWLRWF
EEECCHHHHHHCC
>Mature Secondary Structure 
AILEHIPDLEKCVAKIDDLLRPDGVAYLQGCPLWAGSHGHHVWVLKEEGDYDSELTPEI
CHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCC
ENRTNGPLFSFVEKDKNPIPHWAHLVLTPDSLTEFLTKENVSESHARRIINFVYNVDGTM
CCCCCCCHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE
IGCCSNFKSASEIIKTFQTKFIVDAERIPSAHPNEYFTAARKKYSYWDLQTHGLMLWLKP
EEHHHCHHHHHHHHHHHHHHHEEEHHHCCCCCCCHHHHHHHHCCCEEEEEECCEEEEECC
KSYMLERVREPDPKVSVIVPFYKVEDYLGECIESIIRQDYKNIEIILVDDASPDGSRGIA
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHH
QRFAAKDSRIRVLTHEKNEGLGPARNTGVHHATGFYVFFLDSDDLLHSSQAIGKLVSAAQ
HHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECEEEEEEECCCHHHHHHHHHHHHHHHHH
SHSNCPVVVGGCVRLMANGKIQPVDHIDDRGGLNKSGGVVHGVEAFLAGVRLPNAYYLPP
CCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCC
RAWGALIERTFYENLMLDFPSGEHEDLVHTPFLYFLADNVLYVKDIVVTYRYRDCSISNA
HHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCCC
RWTPEMVRRYGDLWRNFKSIALRRGLENYLGDCAFKFIYHLIWRMRNNSFDDDSRTEVLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LVGNMFQDVENVTYKHEFYRSMNSVRKFVGGTFRRDKYYEWLTKSLPEDLVLDYYRNHSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
LGRLSFGQWLRWF
EEECCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]