| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678968
Identifier: 182678968
GI number: 182678968
Start: 2287200
End: 2288249
Strand: Reverse
Name: 182678968
Synonym: Bind_2002
Alternate gene names: NA
Gene position: 2288249-2287200 (Counterclockwise)
Preceding gene: 182678969
Following gene: 182678967
Centisome position: 54.87
GC content: 46.29
Gene sequence:
>1050_bases ATGTCGAGGCAACTTCGGTTAACAAAGTTTCGCGAACTGTCGCTAGCCGATCCATTTTTTGATAGCTTAAAAGCAGGATA TCAGAATTTTTCCGCTTGGTTCGCCCGCAAGGCCGACGAGGACCTATATGTCGTGGTTGACGGCTCCTACCTTAGCGGCA TGATCTATCTAAAGCTTGAAGACCATCCTGTGACCGATGTTGATCCTCCGCTTCCCAATGCTCGCTGGCTGAAGGTAGGC ACTCTTAAGATAGAGGGACGCGGGACGAAGATGGGTGAACGCGTCCTCAAAAAGATACTTGATACTGCGATCTTGGAAGG AAGAGATGGAATTTATATCACTGTTTTTGATATTCACGCCGATCTGATTGCGCTGTTCGAGCGATACGGATTTGTGCGTC ATGCAACCAAGACGACGATTGATGGCATTGAACTGGTGCTTGTGCGACGATTAGATCATTTTACAGGCAATATGATTTCA GACTATCCGTTCATACATACCGCCGGGCAGCGATACTGGCTCCTTGCTATTTATCCGGAGTTTCACTCACAGCTCCTACC CGATTCGATATTGAACAATGAGCCGAAGGAGATAGTAGAGGATGTCTCTCACACAAATACAATTCATAAAGCTTATATAG GGCGAGTGCCTCTTACTAGATTATCTCGTGGTGACGTAGTGGTTATGTATAGAACATCTGATGGAAAAGCGCCAGCTTAC TATAGATCGGTAGCTACATCCATCTGCGTTGTAGAGGACGTACGAAGAAAGCAAGACTTTTCGGACGTTGACGCTTTTGT GGATTATGCGAGAAAGCATAGTGTGTTTGATGATAACACTCTTCGCGACTGGTTTGTGACAAACCGGAAACTTTACGTAG CTCGTATGACATACAATGCGGCGTTTGGTCGCCGTATGACCAGGGGTAAGCTATTGGATGAAGTAGGTATCACCGAACAA CCACGGTGGGACTTACGCGAGCTCTCCTCTGAGCAGTTGCATCACATAATTGATATGGGGAATGTCGATGCGCGTCTTAT TATCGATTAA
Upstream 100 bases:
>100_bases CAAAAGGAAGTCTACTGCGTGGCTCTGGACTCGGTAGCGCTCCATTGTCATTGTGGGCTACAAGCGTTCTGGGGTAAATG AGCCTCGAAGGGGAGGGGAA
Downstream 100 bases:
>100_bases GCCGGATCATGTTGCAAATATAATGTCCGGCAAGAAGGTATTCGAATTTCGGCGGAAAGTCTTTGCCCGACGAGATGTTC GGGTAGCAATTATATATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSRQLRLTKFRELSLADPFFDSLKAGYQNFSAWFARKADEDLYVVVDGSYLSGMIYLKLEDHPVTDVDPPLPNARWLKVG TLKIEGRGTKMGERVLKKILDTAILEGRDGIYITVFDIHADLIALFERYGFVRHATKTTIDGIELVLVRRLDHFTGNMIS DYPFIHTAGQRYWLLAIYPEFHSQLLPDSILNNEPKEIVEDVSHTNTIHKAYIGRVPLTRLSRGDVVVMYRTSDGKAPAY YRSVATSICVVEDVRRKQDFSDVDAFVDYARKHSVFDDNTLRDWFVTNRKLYVARMTYNAAFGRRMTRGKLLDEVGITEQ PRWDLRELSSEQLHHIIDMGNVDARLIID
Sequences:
>Translated_349_residues MSRQLRLTKFRELSLADPFFDSLKAGYQNFSAWFARKADEDLYVVVDGSYLSGMIYLKLEDHPVTDVDPPLPNARWLKVG TLKIEGRGTKMGERVLKKILDTAILEGRDGIYITVFDIHADLIALFERYGFVRHATKTTIDGIELVLVRRLDHFTGNMIS DYPFIHTAGQRYWLLAIYPEFHSQLLPDSILNNEPKEIVEDVSHTNTIHKAYIGRVPLTRLSRGDVVVMYRTSDGKAPAY YRSVATSICVVEDVRRKQDFSDVDAFVDYARKHSVFDDNTLRDWFVTNRKLYVARMTYNAAFGRRMTRGKLLDEVGITEQ PRWDLRELSSEQLHHIIDMGNVDARLIID >Mature_348_residues SRQLRLTKFRELSLADPFFDSLKAGYQNFSAWFARKADEDLYVVVDGSYLSGMIYLKLEDHPVTDVDPPLPNARWLKVGT LKIEGRGTKMGERVLKKILDTAILEGRDGIYITVFDIHADLIALFERYGFVRHATKTTIDGIELVLVRRLDHFTGNMISD YPFIHTAGQRYWLLAIYPEFHSQLLPDSILNNEPKEIVEDVSHTNTIHKAYIGRVPLTRLSRGDVVVMYRTSDGKAPAYY RSVATSICVVEDVRRKQDFSDVDAFVDYARKHSVFDDNTLRDWFVTNRKLYVARMTYNAAFGRRMTRGKLLDEVGITEQP RWDLRELSSEQLHHIIDMGNVDARLIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40257; Mature: 40125
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQLRLTKFRELSLADPFFDSLKAGYQNFSAWFARKADEDLYVVVDGSYLSGMIYLKLE CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHCCEEEEEEC DHPVTDVDPPLPNARWLKVGTLKIEGRGTKMGERVLKKILDTAILEGRDGIYITVFDIHA CCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHH DLIALFERYGFVRHATKTTIDGIELVLVRRLDHFTGNMISDYPFIHTAGQRYWLLAIYPE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECHH FHSQLLPDSILNNEPKEIVEDVSHTNTIHKAYIGRVPLTRLSRGDVVVMYRTSDGKAPAY HHHHHCCHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCHHEECCCCEEEEEECCCCCCCHH YRSVATSICVVEDVRRKQDFSDVDAFVDYARKHSVFDDNTLRDWFVTNRKLYVARMTYNA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHEEECCEEEEEEEEEHH AFGRRMTRGKLLDEVGITEQPRWDLRELSSEQLHHIIDMGNVDARLIID HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure SRQLRLTKFRELSLADPFFDSLKAGYQNFSAWFARKADEDLYVVVDGSYLSGMIYLKLE CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHCCEEEEEEC DHPVTDVDPPLPNARWLKVGTLKIEGRGTKMGERVLKKILDTAILEGRDGIYITVFDIHA CCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHH DLIALFERYGFVRHATKTTIDGIELVLVRRLDHFTGNMISDYPFIHTAGQRYWLLAIYPE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECHH FHSQLLPDSILNNEPKEIVEDVSHTNTIHKAYIGRVPLTRLSRGDVVVMYRTSDGKAPAY HHHHHCCHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCHHEECCCCEEEEEECCCCCCCHH YRSVATSICVVEDVRRKQDFSDVDAFVDYARKHSVFDDNTLRDWFVTNRKLYVARMTYNA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHEEECCEEEEEEEEEHH AFGRRMTRGKLLDEVGITEQPRWDLRELSSEQLHHIIDMGNVDARLIID HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA