| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678964
Identifier: 182678964
GI number: 182678964
Start: 2284615
End: 2285718
Strand: Direct
Name: 182678964
Synonym: Bind_1998
Alternate gene names: NA
Gene position: 2284615-2285718 (Clockwise)
Preceding gene: 182678963
Following gene: 182678965
Centisome position: 54.78
GC content: 49.0
Gene sequence:
>1104_bases GTGGCGGCTAATGGTAGTATGGCAGTTTGGTGTGTGCATCGAGCTGGCTCGCAAAATGCCACGGCCGAAGTACACTTCAA TTATTGGCGTATAGCTGGGGACACCGATTTTTCAGGACGTCGAGGTCACCCGGCTAGGGATTTCGCGGAGATAGGAATTT GGCTGGCAACCCCCTTGCTGACAGAGAAGGTATACATTTTCATTCCTGAAGTACTCGACGATAACACAATTGAAGACTGC GGCCCTTATTTTTCGGAAGTAAGCATTGCACAGGGGATATTCAATGAACCTCTATCATGCATATCTGCTGGTCCGCCAGG TCCTCCTCGTGTCGAGTTGCAAAAGGGGCAAGCTCCATACTGCCGCGTTCACAAGTTCATGAAGGACTCTTCAGGAAAGA TTGACCTTTCACAGTTGTCAAGGACAGACTATCCTGGCGGAACTCTATTAGAGATAACTCGTTGTGCTATTGACGAGGTT TGCACGACGATCCTCGCAGCAGCTTACTTCAGGTTAAGAATTTATGTTAAGGACAGGAGAAAGGGACCGTTTGTACGAGT GATACCGCCGAAAGACAGGTTCTTTCAGAGCGGTTTCGACGAAGTCGAATATGTGGACTTTCGCTTGAATGAAGCCCGCA CGCTTCCCCCCTCCATTGAAACACGCATGAGAACAGATCACGCTGTCTCCCTTGCAATCACGAAGGTAGCGTTTCTAACT GCGGTCCCTGTTCTGTCGGACTTAACAGCAAGCAATCGGGAGTCACACAAGAACAGACTCCTGGAGCACGATCTCTGGGA CCCTTACATTCCGAGTGGGATACCTCCCGGTATGATGGTTTATCACTGGCGCAAGGATGAGGCTCAAGGCGTTGAAGATT TCTCCGCTTTTGTGAAACTTCAAACACGTAGAAGCGGTCGCCGAACCTTATATGCATATTTAGCCGTCGCTTTCGTGTTC GGCATCGTTGGTAATCTTGTTGCTTCTGAGATCCAACCCCATATTGAACATGTATGGATAGACTATGTATGGAATCGAAT CTGGAGCATGAACTTACCAGTGAGTCCTTCGAAACCGACTCACTCATTGCCGGAGCCTCGGTAA
Upstream 100 bases:
>100_bases AGTATAATACGTCCATTAACGGCGTTGACGACGTATTCTCTCGGAAATATAGGAATGGGGAAATCCCTCGATCGAAACGC GAAGAACCTTGGAGAGGCCA
Downstream 100 bases:
>100_bases ACCGAATGACGCAATGGCATGATCGGCGATATCTCGTGCCTGGAGCTTACCCGCAGATGATCTGCGCCGAATCTGAAATT GCTCGTCCCACTCTATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAANGSMAVWCVHRAGSQNATAEVHFNYWRIAGDTDFSGRRGHPARDFAEIGIWLATPLLTEKVYIFIPEVLDDNTIEDC GPYFSEVSIAQGIFNEPLSCISAGPPGPPRVELQKGQAPYCRVHKFMKDSSGKIDLSQLSRTDYPGGTLLEITRCAIDEV CTTILAAAYFRLRIYVKDRRKGPFVRVIPPKDRFFQSGFDEVEYVDFRLNEARTLPPSIETRMRTDHAVSLAITKVAFLT AVPVLSDLTASNRESHKNRLLEHDLWDPYIPSGIPPGMMVYHWRKDEAQGVEDFSAFVKLQTRRSGRRTLYAYLAVAFVF GIVGNLVASEIQPHIEHVWIDYVWNRIWSMNLPVSPSKPTHSLPEPR
Sequences:
>Translated_367_residues MAANGSMAVWCVHRAGSQNATAEVHFNYWRIAGDTDFSGRRGHPARDFAEIGIWLATPLLTEKVYIFIPEVLDDNTIEDC GPYFSEVSIAQGIFNEPLSCISAGPPGPPRVELQKGQAPYCRVHKFMKDSSGKIDLSQLSRTDYPGGTLLEITRCAIDEV CTTILAAAYFRLRIYVKDRRKGPFVRVIPPKDRFFQSGFDEVEYVDFRLNEARTLPPSIETRMRTDHAVSLAITKVAFLT AVPVLSDLTASNRESHKNRLLEHDLWDPYIPSGIPPGMMVYHWRKDEAQGVEDFSAFVKLQTRRSGRRTLYAYLAVAFVF GIVGNLVASEIQPHIEHVWIDYVWNRIWSMNLPVSPSKPTHSLPEPR >Mature_366_residues AANGSMAVWCVHRAGSQNATAEVHFNYWRIAGDTDFSGRRGHPARDFAEIGIWLATPLLTEKVYIFIPEVLDDNTIEDCG PYFSEVSIAQGIFNEPLSCISAGPPGPPRVELQKGQAPYCRVHKFMKDSSGKIDLSQLSRTDYPGGTLLEITRCAIDEVC TTILAAAYFRLRIYVKDRRKGPFVRVIPPKDRFFQSGFDEVEYVDFRLNEARTLPPSIETRMRTDHAVSLAITKVAFLTA VPVLSDLTASNRESHKNRLLEHDLWDPYIPSGIPPGMMVYHWRKDEAQGVEDFSAFVKLQTRRSGRRTLYAYLAVAFVFG IVGNLVASEIQPHIEHVWIDYVWNRIWSMNLPVSPSKPTHSLPEPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41484; Mature: 41353
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANGSMAVWCVHRAGSQNATAEVHFNYWRIAGDTDFSGRRGHPARDFAEIGIWLATPLL CCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH TEKVYIFIPEVLDDNTIEDCGPYFSEVSIAQGIFNEPLSCISAGPPGPPRVELQKGQAPY HCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCCHH CRVHKFMKDSSGKIDLSQLSRTDYPGGTLLEITRCAIDEVCTTILAAAYFRLRIYVKDRR HHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC KGPFVRVIPPKDRFFQSGFDEVEYVDFRLNEARTLPPSIETRMRTDHAVSLAITKVAFLT CCCEEEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH AVPVLSDLTASNRESHKNRLLEHDLWDPYIPSGIPPGMMVYHWRKDEAQGVEDFSAFVKL HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHH QTRRSGRRTLYAYLAVAFVFGIVGNLVASEIQPHIEHVWIDYVWNRIWSMNLPVSPSKPT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC HSLPEPR CCCCCCC >Mature Secondary Structure AANGSMAVWCVHRAGSQNATAEVHFNYWRIAGDTDFSGRRGHPARDFAEIGIWLATPLL CCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH TEKVYIFIPEVLDDNTIEDCGPYFSEVSIAQGIFNEPLSCISAGPPGPPRVELQKGQAPY HCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCCHH CRVHKFMKDSSGKIDLSQLSRTDYPGGTLLEITRCAIDEVCTTILAAAYFRLRIYVKDRR HHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECC KGPFVRVIPPKDRFFQSGFDEVEYVDFRLNEARTLPPSIETRMRTDHAVSLAITKVAFLT CCCEEEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH AVPVLSDLTASNRESHKNRLLEHDLWDPYIPSGIPPGMMVYHWRKDEAQGVEDFSAFVKL HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHH QTRRSGRRTLYAYLAVAFVFGIVGNLVASEIQPHIEHVWIDYVWNRIWSMNLPVSPSKPT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC HSLPEPR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA