| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678909
Identifier: 182678909
GI number: 182678909
Start: 2211714
End: 2212496
Strand: Direct
Name: 182678909
Synonym: Bind_1943
Alternate gene names: NA
Gene position: 2211714-2212496 (Clockwise)
Preceding gene: 182678908
Following gene: 182678913
Centisome position: 53.04
GC content: 58.75
Gene sequence:
>783_bases ATGATCATGCTAAGGGACACGCTTGCCCTTTTGTCCGGGGCCCTGTCTGGATTCTCGCTTGGTGTCGTCGGTGGCGGCGG GTCGGTTCTGGCCACGCCTTTGCTGCTTTATCTCGTCGGCCTCGCTCCCGCCCATGTCGCCATCGGAACCGGCGCCGTTG CTGTTTCAGTCAATGCCTATGTCAGCTTTTTCAGCCAGATCGGCTCCGGCCGCATTCGTTGGCGCGCGGCCGTTCTCTTC GCTCTGATCGGCACAATCGGCGCTTTCATTGGCTCGACGCTCGGCAAATCGCTCAATGGCGACAAAATCATTTTTCTTTT CGGCTTCGCCATGGTCGGCATCGGTCTCACCATGCTGCGGCCGATCCATGCCGAAAAGATGGATGCCGATGCGGATACAC GTTTTTCGACAATCATCCTCGCCGCTCTCGCCGTTGGCCTGGCCGCTGGCTTTTTCGGCATTGGTGGCGGCGTCCTCGTT GTTCCAGGACTCGTGTTGGCGACCGGCATGCCGATGATCAACGCGGTTGCCACTTCGCTGCTTGCGGTCGGCACCTTCGG CCTGACAACGGCCATCAATTATGCCGTCTCGGGCCTCATCGACTGGCGCATTGCCCTAGAGTTCATATTGGGCGGCATCA TGGGGGGCTTTTTGGGCGTCAAAGCCGCCTATTTCCTCTCCCGCTACAAGGGGGCTCTCAACAAAGCGTTCTCGCTGCTG ATCTTCAGCGTGGCCGCCTATGTCTTGTTTCGCAGCGGTCAAAGCCTGGTGAATGTACAATAG
Upstream 100 bases:
>100_bases TTACTGGCACCGCCGCCGCCATGTTCGCGCGGGTCGAGCCACCCCCTTCGTAAAAAAACTCGATCCCCTTCACCAACTTT CCTTTGAGCCCTGAGAGAGC
Downstream 100 bases:
>100_bases GAAAATGTGTATCCCTTTATGAGAGAGCCCGTCCTCAAAAAAGGATCATCTGCTCCCACCTCCCAAATGGGAGGTGGGAA ATACCGTCGAGGGATAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MIMLRDTLALLSGALSGFSLGVVGGGGSVLATPLLLYLVGLAPAHVAIGTGAVAVSVNAYVSFFSQIGSGRIRWRAAVLF ALIGTIGAFIGSTLGKSLNGDKIIFLFGFAMVGIGLTMLRPIHAEKMDADADTRFSTIILAALAVGLAAGFFGIGGGVLV VPGLVLATGMPMINAVATSLLAVGTFGLTTAINYAVSGLIDWRIALEFILGGIMGGFLGVKAAYFLSRYKGALNKAFSLL IFSVAAYVLFRSGQSLVNVQ
Sequences:
>Translated_260_residues MIMLRDTLALLSGALSGFSLGVVGGGGSVLATPLLLYLVGLAPAHVAIGTGAVAVSVNAYVSFFSQIGSGRIRWRAAVLF ALIGTIGAFIGSTLGKSLNGDKIIFLFGFAMVGIGLTMLRPIHAEKMDADADTRFSTIILAALAVGLAAGFFGIGGGVLV VPGLVLATGMPMINAVATSLLAVGTFGLTTAINYAVSGLIDWRIALEFILGGIMGGFLGVKAAYFLSRYKGALNKAFSLL IFSVAAYVLFRSGQSLVNVQ >Mature_260_residues MIMLRDTLALLSGALSGFSLGVVGGGGSVLATPLLLYLVGLAPAHVAIGTGAVAVSVNAYVSFFSQIGSGRIRWRAAVLF ALIGTIGAFIGSTLGKSLNGDKIIFLFGFAMVGIGLTMLRPIHAEKMDADADTRFSTIILAALAVGLAAGFFGIGGGVLV VPGLVLATGMPMINAVATSLLAVGTFGLTTAINYAVSGLIDWRIALEFILGGIMGGFLGVKAAYFLSRYKGALNKAFSLL IFSVAAYVLFRSGQSLVNVQ
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 26614; Mature: 26614
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMLRDTLALLSGALSGFSLGVVGGGGSVLATPLLLYLVGLAPAHVAIGTGAVAVSVNAY CEEEHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCHHEEHHHHH VSFFSQIGSGRIRWRAAVLFALIGTIGAFIGSTLGKSLNGDKIIFLFGFAMVGIGLTMLR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH PIHAEKMDADADTRFSTIILAALAVGLAAGFFGIGGGVLVVPGLVLATGMPMINAVATSL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH LAVGTFGLTTAINYAVSGLIDWRIALEFILGGIMGGFLGVKAAYFLSRYKGALNKAFSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFSVAAYVLFRSGQSLVNVQ HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIMLRDTLALLSGALSGFSLGVVGGGGSVLATPLLLYLVGLAPAHVAIGTGAVAVSVNAY CEEEHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCHHEEHHHHH VSFFSQIGSGRIRWRAAVLFALIGTIGAFIGSTLGKSLNGDKIIFLFGFAMVGIGLTMLR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH PIHAEKMDADADTRFSTIILAALAVGLAAGFFGIGGGVLVVPGLVLATGMPMINAVATSL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH LAVGTFGLTTAINYAVSGLIDWRIALEFILGGIMGGFLGVKAAYFLSRYKGALNKAFSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFSVAAYVLFRSGQSLVNVQ HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]