| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182678885
Identifier: 182678885
GI number: 182678885
Start: 2187674
End: 2188684
Strand: Reverse
Name: 182678885
Synonym: Bind_1918
Alternate gene names: NA
Gene position: 2188684-2187674 (Counterclockwise)
Preceding gene: 182678886
Following gene: 182678884
Centisome position: 52.48
GC content: 48.47
Gene sequence:
>1011_bases ATGAAGGCGTTGCGTCCGCACAAGGCTGTCTGTGATGCTCAATTTAAAGTTCCGAATATCCTGACCACTGATCCCTTCAA CTATGTTGATTTATGGCTTCGTCGCAAACATCACAACGATGCTCTGTTTTATTGGCGGCAGGCCCAAGCCTTTTACCGAG CGTCGCAAAATCTCTCGATCGAATCCGCGCCTTTAGTGCTTTACTATTGCTTTATGAACGCCGCGAAAGCCCTCCTATCT GCTAAAGGGGTGACGTTCAGCCCAGTGCATGGCGTAACAGCACATAATATGCGAGGACCTACGAGTAAGGTACTGCTGAA GAACGAAGGCGTTAAAATCAAAAGCAATGGAATTGTACCGTCTCTTTCAGCTTATTTTGGCGAGGGGGAACGGTCTCTAA TACACAGTCTTGAGGACATTCTATACAACCTTGTTTTCATCCATCGAACCTACTGCCTGAGTTACCCAAGCAGCAAGGAG CGGTTCCTCCCATTGAAGAGTGCAGAATTTGTCCGCGATTCCGTAACAGGAGAGGTCTGGTTCAGGGCCAATCCCGTGGA CGACGCAGATTGGCGCTTTTTTAAGAAGGTCTTGCCTCAGGAGGTTGCTATAAACGCGAATGACCTCAAGGAGATATCAT CCATCGCGAGAATCAATTGGGCTACGAGCAACAATCCAACTGGCCAAGAACTTGATGCACTTCGAGGGTTGAACCGAACT CTCAGGAGGTCCCTCCACTACATTAATGGTGCGCAAACACTGTGGTACCTCAAAACCAAAGGGACCTATGTGATTGATCG CCAGTCAATCACTCTTACTCTAGCAGCCATGCACCGACTAAGCGAAATTTGCCGCTACCGTCCTTCCGAACTTGGGTCGC TTCTGAATGGCCAAAAGCACTGGTTGTTGAGCGAATTTGTTGCGATGTCACGAACCCAATTCTTGGACGAAGTTGCCTGT GAAATGACTGGACATCAGGTCATGATTCCAAACGTCCGTATGCCAGTTTGA
Upstream 100 bases:
>100_bases TGGCCATTCGTTTATGATCCAAGCTTGTACGATTTGGTAACGATGTCGGGACGCGCGCTCAGAAGGGTAGGCTGTGGCAA TAGAAGCAATCCGAATTGGG
Downstream 100 bases:
>100_bases GGTCGTCCATAATGAACATTTATGTCGCTTGCGGTCTTACGCATGTGCCCAGAGAAATCTTTGTCTGTTATGTTGCCTTT CTTCACAAGCTTGCCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKALRPHKAVCDAQFKVPNILTTDPFNYVDLWLRRKHHNDALFYWRQAQAFYRASQNLSIESAPLVLYYCFMNAAKALLS AKGVTFSPVHGVTAHNMRGPTSKVLLKNEGVKIKSNGIVPSLSAYFGEGERSLIHSLEDILYNLVFIHRTYCLSYPSSKE RFLPLKSAEFVRDSVTGEVWFRANPVDDADWRFFKKVLPQEVAINANDLKEISSIARINWATSNNPTGQELDALRGLNRT LRRSLHYINGAQTLWYLKTKGTYVIDRQSITLTLAAMHRLSEICRYRPSELGSLLNGQKHWLLSEFVAMSRTQFLDEVAC EMTGHQVMIPNVRMPV
Sequences:
>Translated_336_residues MKALRPHKAVCDAQFKVPNILTTDPFNYVDLWLRRKHHNDALFYWRQAQAFYRASQNLSIESAPLVLYYCFMNAAKALLS AKGVTFSPVHGVTAHNMRGPTSKVLLKNEGVKIKSNGIVPSLSAYFGEGERSLIHSLEDILYNLVFIHRTYCLSYPSSKE RFLPLKSAEFVRDSVTGEVWFRANPVDDADWRFFKKVLPQEVAINANDLKEISSIARINWATSNNPTGQELDALRGLNRT LRRSLHYINGAQTLWYLKTKGTYVIDRQSITLTLAAMHRLSEICRYRPSELGSLLNGQKHWLLSEFVAMSRTQFLDEVAC EMTGHQVMIPNVRMPV >Mature_336_residues MKALRPHKAVCDAQFKVPNILTTDPFNYVDLWLRRKHHNDALFYWRQAQAFYRASQNLSIESAPLVLYYCFMNAAKALLS AKGVTFSPVHGVTAHNMRGPTSKVLLKNEGVKIKSNGIVPSLSAYFGEGERSLIHSLEDILYNLVFIHRTYCLSYPSSKE RFLPLKSAEFVRDSVTGEVWFRANPVDDADWRFFKKVLPQEVAINANDLKEISSIARINWATSNNPTGQELDALRGLNRT LRRSLHYINGAQTLWYLKTKGTYVIDRQSITLTLAAMHRLSEICRYRPSELGSLLNGQKHWLLSEFVAMSRTQFLDEVAC EMTGHQVMIPNVRMPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38369; Mature: 38369
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRPHKAVCDAQFKVPNILTTDPFNYVDLWLRRKHHNDALFYWRQAQAFYRASQNLSI CCCCCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCC ESAPLVLYYCFMNAAKALLSAKGVTFSPVHGVTAHNMRGPTSKVLLKNEGVKIKSNGIVP CCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCC SLSAYFGEGERSLIHSLEDILYNLVFIHRTYCLSYPSSKERFLPLKSAEFVRDSVTGEVW CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEE FRANPVDDADWRFFKKVLPQEVAINANDLKEISSIARINWATSNNPTGQELDALRGLNRT EEECCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH LRRSLHYINGAQTLWYLKTKGTYVIDRQSITLTLAAMHRLSEICRYRPSELGSLLNGQKH HHHHHHHCCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH WLLSEFVAMSRTQFLDEVACEMTGHQVMIPNVRMPV HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MKALRPHKAVCDAQFKVPNILTTDPFNYVDLWLRRKHHNDALFYWRQAQAFYRASQNLSI CCCCCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCC ESAPLVLYYCFMNAAKALLSAKGVTFSPVHGVTAHNMRGPTSKVLLKNEGVKIKSNGIVP CCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCC SLSAYFGEGERSLIHSLEDILYNLVFIHRTYCLSYPSSKERFLPLKSAEFVRDSVTGEVW CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEE FRANPVDDADWRFFKKVLPQEVAINANDLKEISSIARINWATSNNPTGQELDALRGLNRT EEECCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH LRRSLHYINGAQTLWYLKTKGTYVIDRQSITLTLAAMHRLSEICRYRPSELGSLLNGQKH HHHHHHHCCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH WLLSEFVAMSRTQFLDEVACEMTGHQVMIPNVRMPV HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA