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The map label for this gene is ygaU [C]

Identifier: 182678877

GI number: 182678877

Start: 2179196

End: 2180344

Strand: Reverse

Name: ygaU [C]

Synonym: Bind_1910

Alternate gene names: 182678877

Gene position: 2180344-2179196 (Counterclockwise)

Preceding gene: 182678880

Following gene: 182678876

Centisome position: 52.28

GC content: 61.71

Gene sequence:

>1149_bases
ATGTCCGACGACCAGGGCCTGGGGCAGCGCGCGGTTATTTTTGTGTTGCTTCTCGGTGTAGCGCTCGCGGCTTATGTCGG
CCTGCAACTCTGGCAGCGGCGGCCGCTGCCTCCACCCCCCGAAAAAGAAGTCAGGCCGGAGGATCAATTCGCCGATTTGC
CCAAGCCGATTCCCTTGCCGCCGGTGCCACCCGCGCCTGCCCGTCCCGCGATCCTCATGCCGCCGCCCGATACCCAAGCG
AGCTTGCCGCAATTCGATATTGTCCGAATCGAGGCTTCAGGCACCATGCTTGTCGCTGGCCGCGCCAAGCCCGAGGCGGA
GGTCGTCTTGCTCAATCAGGGGGAGGATCGGGAGCAGGATAAGGAGCTTGCCAGGGTCACGGCCGATGCCGCGGGATTTT
TCGTCATGGACGCCGTGACATTGCAACCCGGTGTTTATGCCCTTTCCTTGCGCATGACGCCGAAAGAACAAATGCCGCAA
AATTCGCCGCAGAATGTCGCTGTTTTCCTGCCTGAGCCAGGGCGTGGCGAGGCCATGATAGCCTTGGCGGAAGCCGGCAA
ACCGACGCAAGTGCTGCAGGCGCCGAAGCCGCCGAATGAGGCTGCTGCCGCGTCTCAACGCCTTGCTTTCAAGACGGTGG
ACGTTGAAGCCGGCCAAGGTCTGTTTGTCGCGGGGCAGGCAGCACCTGACGCGGTTTTGCAGCTTTATCTCAATGAGATA
TTGCTGACGCAGGTCACGGCGGCCAAGGATGGCGCGTGGTCCCTTCGGGTTGGCCGAGGTCTTGAGGCGGGTTCCTATCG
GTTGCGCGCCGATGCGATGGATGAAAAGGGGAATGTCGGGGAGCGCGCGGAAATTCCGTTCGAAGTGCCGGCCAGTTCTC
CTGTCGCGGCGGCCTCGGACATGCGGCGGGAGGAGCCTGCCTCGTCCAGTGCGGCGGTGATCGAGAAAATCGATACGATG
CGCGTGGAGGAGGGTGATACCCTTTGGCGGATCAGTATGAAAAGGCTCGGTTCCGGGTTCCATTATATGCAGATCTATTC
GGCCAATAGCGCGCAGATCCGCGATCCCCAAAAGATCTACCCCGGCCAGATCCTCATTCTGCCTCCGGCTCCGCCGCAAG
AGGAGCAAAAGCAGGCGGCGCCAAGATGA

Upstream 100 bases:

>100_bases
TTTCCCATAATCAAGTCTTGCCGTTTGCCTCAAGGAAAGCCAATCTGAGAAATCAATATTTGTGGAGGATTCGGTGTCGA
ACTCTCCCCCGAAGGGGTCA

Downstream 100 bases:

>100_bases
ATTTGCCACGCGATAGGGCTACATGATCGGCCCCTCGCTGGGCATTCATGCTGGCGGCTTGGCTGGAATGTCTTTTGCCT
GATCCTATATGGAGAAGAGA

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSDDQGLGQRAVIFVLLLGVALAAYVGLQLWQRRPLPPPPEKEVRPEDQFADLPKPIPLPPVPPAPARPAILMPPPDTQA
SLPQFDIVRIEASGTMLVAGRAKPEAEVVLLNQGEDREQDKELARVTADAAGFFVMDAVTLQPGVYALSLRMTPKEQMPQ
NSPQNVAVFLPEPGRGEAMIALAEAGKPTQVLQAPKPPNEAAAASQRLAFKTVDVEAGQGLFVAGQAAPDAVLQLYLNEI
LLTQVTAAKDGAWSLRVGRGLEAGSYRLRADAMDEKGNVGERAEIPFEVPASSPVAAASDMRREEPASSSAAVIEKIDTM
RVEEGDTLWRISMKRLGSGFHYMQIYSANSAQIRDPQKIYPGQILILPPAPPQEEQKQAAPR

Sequences:

>Translated_382_residues
MSDDQGLGQRAVIFVLLLGVALAAYVGLQLWQRRPLPPPPEKEVRPEDQFADLPKPIPLPPVPPAPARPAILMPPPDTQA
SLPQFDIVRIEASGTMLVAGRAKPEAEVVLLNQGEDREQDKELARVTADAAGFFVMDAVTLQPGVYALSLRMTPKEQMPQ
NSPQNVAVFLPEPGRGEAMIALAEAGKPTQVLQAPKPPNEAAAASQRLAFKTVDVEAGQGLFVAGQAAPDAVLQLYLNEI
LLTQVTAAKDGAWSLRVGRGLEAGSYRLRADAMDEKGNVGERAEIPFEVPASSPVAAASDMRREEPASSSAAVIEKIDTM
RVEEGDTLWRISMKRLGSGFHYMQIYSANSAQIRDPQKIYPGQILILPPAPPQEEQKQAAPR
>Mature_381_residues
SDDQGLGQRAVIFVLLLGVALAAYVGLQLWQRRPLPPPPEKEVRPEDQFADLPKPIPLPPVPPAPARPAILMPPPDTQAS
LPQFDIVRIEASGTMLVAGRAKPEAEVVLLNQGEDREQDKELARVTADAAGFFVMDAVTLQPGVYALSLRMTPKEQMPQN
SPQNVAVFLPEPGRGEAMIALAEAGKPTQVLQAPKPPNEAAAASQRLAFKTVDVEAGQGLFVAGQAAPDAVLQLYLNEIL
LTQVTAAKDGAWSLRVGRGLEAGSYRLRADAMDEKGNVGERAEIPFEVPASSPVAAASDMRREEPASSSAAVIEKIDTMR
VEEGDTLWRISMKRLGSGFHYMQIYSANSAQIRDPQKIYPGQILILPPAPPQEEQKQAAPR

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41189; Mature: 41057

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDQGLGQRAVIFVLLLGVALAAYVGLQLWQRRPLPPPPEKEVRPEDQFADLPKPIPLP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC
PVPPAPARPAILMPPPDTQASLPQFDIVRIEASGTMLVAGRAKPEAEVVLLNQGEDREQD
CCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCHHHH
KELARVTADAAGFFVMDAVTLQPGVYALSLRMTPKEQMPQNSPQNVAVFLPEPGRGEAMI
HHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCHHHCCCCCCCCEEEEECCCCCCCEEE
ALAEAGKPTQVLQAPKPPNEAAAASQRLAFKTVDVEAGQGLFVAGQAAPDAVLQLYLNEI
EEECCCCCHHHHCCCCCCCHHHHHHHHEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHH
LLTQVTAAKDGAWSLRVGRGLEAGSYRLRADAMDEKGNVGERAEIPFEVPASSPVAAASD
HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHH
MRREEPASSSAAVIEKIDTMRVEEGDTLWRISMKRLGSGFHYMQIYSANSAQIRDPQKIY
HHHCCCCCCHHHHHHHHHHEEECCCCEEEEEEHHHHCCCEEEEEEEECCCCCCCCCHHHC
PGQILILPPAPPQEEQKQAAPR
CCEEEEECCCCCHHHHHHCCCC
>Mature Secondary Structure 
SDDQGLGQRAVIFVLLLGVALAAYVGLQLWQRRPLPPPPEKEVRPEDQFADLPKPIPLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC
PVPPAPARPAILMPPPDTQASLPQFDIVRIEASGTMLVAGRAKPEAEVVLLNQGEDREQD
CCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCHHHH
KELARVTADAAGFFVMDAVTLQPGVYALSLRMTPKEQMPQNSPQNVAVFLPEPGRGEAMI
HHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCHHHCCCCCCCCEEEEECCCCCCCEEE
ALAEAGKPTQVLQAPKPPNEAAAASQRLAFKTVDVEAGQGLFVAGQAAPDAVLQLYLNEI
EEECCCCCHHHHCCCCCCCHHHHHHHHEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHH
LLTQVTAAKDGAWSLRVGRGLEAGSYRLRADAMDEKGNVGERAEIPFEVPASSPVAAASD
HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHH
MRREEPASSSAAVIEKIDTMRVEEGDTLWRISMKRLGSGFHYMQIYSANSAQIRDPQKIY
HHHCCCCCCHHHHHHHHHHEEECCCCEEEEEEHHHHCCCEEEEEEEECCCCCCCCCHHHC
PGQILILPPAPPQEEQKQAAPR
CCEEEEECCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA