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The map label for this gene is glcF [H]

Identifier: 182678868

GI number: 182678868

Start: 2168988

End: 2170325

Strand: Direct

Name: glcF [H]

Synonym: Bind_1901

Alternate gene names: 182678868

Gene position: 2168988-2170325 (Clockwise)

Preceding gene: 182678867

Following gene: 182678872

Centisome position: 52.01

GC content: 58.07

Gene sequence:

>1338_bases
ATGCAAACCAATTTCTCTTCCGCCTTGCTCGAAAATCCGAAAATCGCGACCTCGGAGAAGATTCTGCGGACCTGCGTGCA
TTGCGGATTCTGTACCGCCACCTGTCCGACTTTCGTAACCTTGGCCGAAGAAAACGACAGCCCACGCGGGCGTATTTATC
TCATCAAGGAAATGCTCGAACACGGCCGGCAGGCCGATGCCGAGACGGTCAAGCACATCGACCGATGCCTGTCCTGCCTC
TCCTGCATGACGACCTGCCCCTCGGGCGTCCATTACATGCATCTTGTCGATCATGCGCGCGCCCATATCGAGGAAACCTA
TCGGCGTCCTTTCCTCGACCGTAGCCTGCGCGCAATATTGGCCTTTGTGTTGCCGCGTCCGACCTTGTTCCGGTTCGCCC
TTTTTGCGGCGAGGCCAATGCGGCTCGTTGCGGGCTTTTTTCCTGGCCGGCTCGGCGCCATGTTCGCCCTGGCCCCCTTC
AATCTTCCCTCGCCAAGCCCAGTCGACCGGCCTCAGGTTTTTGCACCACTAGGTCAGAAAAAACTGCGTGTCGGCTTGCT
GAATGGCTGCGCCCAAAGAGTTCTCGATCCGAAAATCAACGAAGCGACTGTTCGTCTTCTGACGCGTCTCGGTGTCGAGG
TCACGGTCGTGGAAGGTGTTGGTTGCTGCGGCGCACTCACCCATCACATGGGCAAGGAGGACAGCGCCCTCGCCTTCGCC
AAGGCCAATATCAAAGCTTTCATGCGTGAAAAGCACAAGCATGGCCTCGACCGGATCGTGATCAATACATCCGGCTGTGG
CACGACCGTCAAGGATTACGGCTTCATGTTCCGGGATGATCTGGAACTTGCCGATGAGGCGGCGACCGTAGCCGCGATGG
CGCGCGATGTGACGGAACTGGTCGAGGAAGTGGGTTTCACGCCAGCCCGCGAAATGCCACCTCTGCGCGTCGCTTATCAC
TCGGCCTGCTCGATGCAGCATGGTCAGAAAATCACGCGGCTTCCGTTCGACCTTCTGAAACAGGCCGGTTTCGCCACTCT
CTCAATTCCTGAATCGCATCTTTGCTGCGGTTCGGCGGGCACCTATAATCTTCTTCAGCCGGAACTCGCGACGCGTCTCA
AAACCCGCAAGATCGAGAATATCAAGACGACGCAACCCGACGTCATCGCCGCCGGTAATATCGGCTGCATGGTCCAGATC
GGCAGCGGCATTGATGTCCCCGTGGTGCATACAGTCGAATTGCTCGATTGGGCGACCGGCGGTCCCGTACCCGAGGCGCT
CGCCTCTTTGCCCATCGCATTTCAGACAAAGGCACAAGAGCCTGAAAGTCCGGTTTAG

Upstream 100 bases:

>100_bases
GGGTTCGACCCCTTGAGCCTGTTGAACCGCCACCGCTTCGGCACGCATTTCGATCCGTCCGTGGACGAGCCCACTTCACT
TCAGGGCGCGGAATAAAGCC

Downstream 100 bases:

>100_bases
AGCATCGCTTTGTCAATCAACGGCCTGAACGATGCTCAAAATACGCATCAGCTTGCCGCAAAGAGATGATCGACCAATGT
CACCACGCTTGCGCGTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MQTNFSSALLENPKIATSEKILRTCVHCGFCTATCPTFVTLAEENDSPRGRIYLIKEMLEHGRQADAETVKHIDRCLSCL
SCMTTCPSGVHYMHLVDHARAHIEETYRRPFLDRSLRAILAFVLPRPTLFRFALFAARPMRLVAGFFPGRLGAMFALAPF
NLPSPSPVDRPQVFAPLGQKKLRVGLLNGCAQRVLDPKINEATVRLLTRLGVEVTVVEGVGCCGALTHHMGKEDSALAFA
KANIKAFMREKHKHGLDRIVINTSGCGTTVKDYGFMFRDDLELADEAATVAAMARDVTELVEEVGFTPAREMPPLRVAYH
SACSMQHGQKITRLPFDLLKQAGFATLSIPESHLCCGSAGTYNLLQPELATRLKTRKIENIKTTQPDVIAAGNIGCMVQI
GSGIDVPVVHTVELLDWATGGPVPEALASLPIAFQTKAQEPESPV

Sequences:

>Translated_445_residues
MQTNFSSALLENPKIATSEKILRTCVHCGFCTATCPTFVTLAEENDSPRGRIYLIKEMLEHGRQADAETVKHIDRCLSCL
SCMTTCPSGVHYMHLVDHARAHIEETYRRPFLDRSLRAILAFVLPRPTLFRFALFAARPMRLVAGFFPGRLGAMFALAPF
NLPSPSPVDRPQVFAPLGQKKLRVGLLNGCAQRVLDPKINEATVRLLTRLGVEVTVVEGVGCCGALTHHMGKEDSALAFA
KANIKAFMREKHKHGLDRIVINTSGCGTTVKDYGFMFRDDLELADEAATVAAMARDVTELVEEVGFTPAREMPPLRVAYH
SACSMQHGQKITRLPFDLLKQAGFATLSIPESHLCCGSAGTYNLLQPELATRLKTRKIENIKTTQPDVIAAGNIGCMVQI
GSGIDVPVVHTVELLDWATGGPVPEALASLPIAFQTKAQEPESPV
>Mature_445_residues
MQTNFSSALLENPKIATSEKILRTCVHCGFCTATCPTFVTLAEENDSPRGRIYLIKEMLEHGRQADAETVKHIDRCLSCL
SCMTTCPSGVHYMHLVDHARAHIEETYRRPFLDRSLRAILAFVLPRPTLFRFALFAARPMRLVAGFFPGRLGAMFALAPF
NLPSPSPVDRPQVFAPLGQKKLRVGLLNGCAQRVLDPKINEATVRLLTRLGVEVTVVEGVGCCGALTHHMGKEDSALAFA
KANIKAFMREKHKHGLDRIVINTSGCGTTVKDYGFMFRDDLELADEAATVAAMARDVTELVEEVGFTPAREMPPLRVAYH
SACSMQHGQKITRLPFDLLKQAGFATLSIPESHLCCGSAGTYNLLQPELATRLKTRKIENIKTTQPDVIAAGNIGCMVQI
GSGIDVPVVHTVELLDWATGGPVPEALASLPIAFQTKAQEPESPV

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=418, Percent_Identity=39.9521531100478, Blast_Score=310, Evalue=9e-86,
Organism=Escherichia coli, GI1786497, Length=241, Percent_Identity=26.9709543568465, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48659; Mature: 48659

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNFSSALLENPKIATSEKILRTCVHCGFCTATCPTFVTLAEENDSPRGRIYLIKEMLE
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCEEEHHHHHH
HGRQADAETVKHIDRCLSCLSCMTTCPSGVHYMHLVDHARAHIEETYRRPFLDRSLRAIL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AFVLPRPTLFRFALFAARPMRLVAGFFPGRLGAMFALAPFNLPSPSPVDRPQVFAPLGQK
HHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHH
KLRVGLLNGCAQRVLDPKINEATVRLLTRLGVEVTVVEGVGCCGALTHHMGKEDSALAFA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCHHHHH
KANIKAFMREKHKHGLDRIVINTSGCGTTVKDYGFMFRDDLELADEAATVAAMARDVTEL
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
VEEVGFTPAREMPPLRVAYHSACSMQHGQKITRLPFDLLKQAGFATLSIPESHLCCGSAG
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHCCCEEEECCCHHCCCCCCC
TYNLLQPELATRLKTRKIENIKTTQPDVIAAGNIGCMVQIGSGIDVPVVHTVELLDWATG
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCC
GPVPEALASLPIAFQTKAQEPESPV
CCHHHHHHHCCEEEECCCCCCCCCC
>Mature Secondary Structure
MQTNFSSALLENPKIATSEKILRTCVHCGFCTATCPTFVTLAEENDSPRGRIYLIKEMLE
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCEEEHHHHHH
HGRQADAETVKHIDRCLSCLSCMTTCPSGVHYMHLVDHARAHIEETYRRPFLDRSLRAIL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AFVLPRPTLFRFALFAARPMRLVAGFFPGRLGAMFALAPFNLPSPSPVDRPQVFAPLGQK
HHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHH
KLRVGLLNGCAQRVLDPKINEATVRLLTRLGVEVTVVEGVGCCGALTHHMGKEDSALAFA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCHHHHH
KANIKAFMREKHKHGLDRIVINTSGCGTTVKDYGFMFRDDLELADEAATVAAMARDVTEL
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
VEEVGFTPAREMPPLRVAYHSACSMQHGQKITRLPFDLLKQAGFATLSIPESHLCCGSAG
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHCCCEEEECCCHHCCCCCCC
TYNLLQPELATRLKTRKIENIKTTQPDVIAAGNIGCMVQIGSGIDVPVVHTVELLDWATG
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCC
GPVPEALASLPIAFQTKAQEPESPV
CCHHHHHHHCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]