Click here to switch to the map view.

The map label for this gene is 182678859

Identifier: 182678859

GI number: 182678859

Start: 2155165

End: 2155896

Strand: Reverse

Name: 182678859

Synonym: Bind_1892

Alternate gene names: NA

Gene position: 2155896-2155165 (Counterclockwise)

Preceding gene: 182678861

Following gene: 182678858

Centisome position: 51.7

GC content: 62.57

Gene sequence:

>732_bases
ATGCTACACATCATCATGGCAGCTCGACCTAACAGCGAGACAGAGGAGCCGGACGCGCGCTCTAAGATTCTCGAAGCCGC
GTCCAGGCTCATCGCCAGCGGCGGTGTCGCGGCGCTGACGACACGGGCCGTGGCAGCAGCGGCGGGAGTACAGGCGCCGA
CATTGTACCGCTTATTTGGCGAGAAGCGCGGATTGCTCGATGCCGTGGCGGAACATGGGCTGACAGCCTTTATCGCGCAG
AAGGTCGCGGCGGAGCCGCATCCCGATCCGGTCCAAGATTTGCGCGATGCGTGGGATTCCTATGTCGCGTTCGGACTCGG
CAATCCGGCGGTCTTCGCGATCATAAACGAAATTGGCGCGGCAGGCCCTCCATCGCCGGCCGTGCTTGCCGGCATCGCTG
TCCTGAAGAAACGGGTCGAGCGGATCGCTCGCTCCGGCCGTCTGAAAATGCCGGTGGAACGGGCTGTTGCGCTGATTCAT
GCTGCTGGGGTCGGCACCGTGGCGACCCTTCTCTCCACGCCTGAAGGACAGCGTGATCCGCAGCTTTCGACCCTTGCCCT
GGAAGCCGTCCTCGCTTCGTTGGTTACGGAACGACCAGTGCAGTCGCACGATGACCTGACATCACTTGCGGTCGGACTTC
GCACTCATCTCGACGAGGCTGATGCGTTAACACCCGGCGAGCGCCTGCTGCTGACGGAACTTCTGGACAGACTAGCACAA
GCGAAGGGCTGA

Upstream 100 bases:

>100_bases
AACGACGATCATCCTTGCCTTCCCATTATCGGTGGAAATGACAAAGTGATATCATTGATAATTGACTGATGCAATCAGCG
CTATCGGCGGTGGCGGGTCA

Downstream 100 bases:

>100_bases
CGCCTTTCAATCAGAGGCTGTGCTGCATCGTAGCCTTATGATCAATAAAAACCATGGTTTTTATTGATTAACAGAGAGTC
TGGCCTATGATGGCTCTGAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLHIIMAARPNSETEEPDARSKILEAASRLIASGGVAALTTRAVAAAAGVQAPTLYRLFGEKRGLLDAVAEHGLTAFIAQ
KVAAEPHPDPVQDLRDAWDSYVAFGLGNPAVFAIINEIGAAGPPSPAVLAGIAVLKKRVERIARSGRLKMPVERAVALIH
AAGVGTVATLLSTPEGQRDPQLSTLALEAVLASLVTERPVQSHDDLTSLAVGLRTHLDEADALTPGERLLLTELLDRLAQ
AKG

Sequences:

>Translated_243_residues
MLHIIMAARPNSETEEPDARSKILEAASRLIASGGVAALTTRAVAAAAGVQAPTLYRLFGEKRGLLDAVAEHGLTAFIAQ
KVAAEPHPDPVQDLRDAWDSYVAFGLGNPAVFAIINEIGAAGPPSPAVLAGIAVLKKRVERIARSGRLKMPVERAVALIH
AAGVGTVATLLSTPEGQRDPQLSTLALEAVLASLVTERPVQSHDDLTSLAVGLRTHLDEADALTPGERLLLTELLDRLAQ
AKG
>Mature_243_residues
MLHIIMAARPNSETEEPDARSKILEAASRLIASGGVAALTTRAVAAAAGVQAPTLYRLFGEKRGLLDAVAEHGLTAFIAQ
KVAAEPHPDPVQDLRDAWDSYVAFGLGNPAVFAIINEIGAAGPPSPAVLAGIAVLKKRVERIARSGRLKMPVERAVALIH
AAGVGTVATLLSTPEGQRDPQLSTLALEAVLASLVTERPVQSHDDLTSLAVGLRTHLDEADALTPGERLLLTELLDRLAQ
AKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25438; Mature: 25438

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIIMAARPNSETEEPDARSKILEAASRLIASGGVAALTTRAVAAAAGVQAPTLYRLFG
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
EKRGLLDAVAEHGLTAFIAQKVAAEPHPDPVQDLRDAWDSYVAFGLGNPAVFAIINEIGA
HHCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
AGPPSPAVLAGIAVLKKRVERIARSGRLKMPVERAVALIHAAGVGTVATLLSTPEGQRDP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLSTLALEAVLASLVTERPVQSHDDLTSLAVGLRTHLDEADALTPGERLLLTELLDRLAQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHH
AKG
CCC
>Mature Secondary Structure
MLHIIMAARPNSETEEPDARSKILEAASRLIASGGVAALTTRAVAAAAGVQAPTLYRLFG
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
EKRGLLDAVAEHGLTAFIAQKVAAEPHPDPVQDLRDAWDSYVAFGLGNPAVFAIINEIGA
HHCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
AGPPSPAVLAGIAVLKKRVERIARSGRLKMPVERAVALIHAAGVGTVATLLSTPEGQRDP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLSTLALEAVLASLVTERPVQSHDDLTSLAVGLRTHLDEADALTPGERLLLTELLDRLAQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHH
AKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA