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The map label for this gene is 182678823

Identifier: 182678823

GI number: 182678823

Start: 2115469

End: 2116671

Strand: Direct

Name: 182678823

Synonym: Bind_1856

Alternate gene names: NA

Gene position: 2115469-2116671 (Clockwise)

Preceding gene: 182678822

Following gene: 182678824

Centisome position: 50.73

GC content: 56.19

Gene sequence:

>1203_bases
ATGTCGGATCCTATCACGCATGCCTCAAGTAAATGCGAAGCCGTCAAAAGCAAGCTCGGGCAGGTCGTCCTTGTCTTCCA
GGGCGGAGGTGCTTTGGGCGCTTACCAGGTCGGCGTTTATGAAGCCTTGCATGCCGCAGGGATCGAACCTGATTGGCTCA
TCGGCACCTCAATCGGTGCAGTCAATGCCTCAATCATAGCCGGCAACCAGCCACAGGATCGTCTCGATAAACTTCAAACA
TTCTGGCGCCGGGTGGAATATGCGCCCCAAGTCGAAGCCATGTCTCAATGGCCTTTGATCGGCCCTTGGCTCGCCAATTG
GAATACAGTGACCACTGGAATTAATGGTTTTTTCACACCGAATCCAATGGCCTTCATGGGCATGTATGTGCCGCTTGCAC
CAGATGCCGCGGGCTATTATTCGATCGCACCTCTTCAAGAGACCCTCGAGGAATTGGTGGATTTTTCCTACCTTTCGGAG
GGCAAGCCACGCCTTACCGTCGGGGCCGCCAAAGTGCGCACATGCGAGATGCGCTATTTCGACAGCAAGGATATGCCATT
GACCGTGCACCACATCATGGCATCGGGTGCGCTGCCGCCCGCCTTTCCGCCGGTCCGGATCGATGGCGACCTCTATTGGG
ACGGCGGTCTCCTTTCGAACACACCTGTCGAGGCCATTTTTGACATGAGACCGCGCCGCAGCGCGCTGATTTTCGCCGTC
GATGTCTGGAATCCCGACGGGCCAGAACCGGAAAGCATTTGGCGCGTGATCAATAGACAAAAGGATATACAATATTCAAG
CCGCGCCATGACACAGATCATTCGACAACGCCAGATCCATCGCCTGAGGCATATCATTGCCGAACTGTCGAAGCGCATTC
CCGAGCCGGAACGCCAGAGCCCGGAAGTGCGCGAGATGGCGTCTTATGGCTGCCAGACCCGTATGCATGTCGTGCACCTG
CTCGCGCCCTTGCTCGAAGGGGAAGGCCATACCAAGGACATTGATTTCAGCCAAGAAAACATCCGCAGACGCTGGGAAGC
AGGCATCTCCGATGCGCGTCATGCCCTTGAAGTTGCTCCCTGGGAAGGAGATCTCGACCCGCTCGAAGGCCTCTATTTAC
ATGAGTTCAAACATGGAACGAGGGGCGAAACGATCAGGAAATCCTGGCATACACCTCTGCCCACCGCCGCTGCCGCCGAA
TGA

Upstream 100 bases:

>100_bases
GATCCCATATCGTGCGAACCGGCATCGTGACGATAGAGCATGATGGTCCAATGACGCGCGGACGCCAAGTCACGCATCAA
GTCGCGCATGGGGAAAAGCG

Downstream 100 bases:

>100_bases
ATGCGGAGTGTCATGACCCGTCCATATCGAGGACCTTTACTCACCAATGCCCTGAATGATGGTGTCCGCGTCCATGACCA
CGGGTGACCTGATGGACATG

Product: patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Alpha/Beta Hydrolase; Transmembrane Protein; Esterase; Serine Protease; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSDPITHASSKCEAVKSKLGQVVLVFQGGGALGAYQVGVYEALHAAGIEPDWLIGTSIGAVNASIIAGNQPQDRLDKLQT
FWRRVEYAPQVEAMSQWPLIGPWLANWNTVTTGINGFFTPNPMAFMGMYVPLAPDAAGYYSIAPLQETLEELVDFSYLSE
GKPRLTVGAAKVRTCEMRYFDSKDMPLTVHHIMASGALPPAFPPVRIDGDLYWDGGLLSNTPVEAIFDMRPRRSALIFAV
DVWNPDGPEPESIWRVINRQKDIQYSSRAMTQIIRQRQIHRLRHIIAELSKRIPEPERQSPEVREMASYGCQTRMHVVHL
LAPLLEGEGHTKDIDFSQENIRRRWEAGISDARHALEVAPWEGDLDPLEGLYLHEFKHGTRGETIRKSWHTPLPTAAAAE

Sequences:

>Translated_400_residues
MSDPITHASSKCEAVKSKLGQVVLVFQGGGALGAYQVGVYEALHAAGIEPDWLIGTSIGAVNASIIAGNQPQDRLDKLQT
FWRRVEYAPQVEAMSQWPLIGPWLANWNTVTTGINGFFTPNPMAFMGMYVPLAPDAAGYYSIAPLQETLEELVDFSYLSE
GKPRLTVGAAKVRTCEMRYFDSKDMPLTVHHIMASGALPPAFPPVRIDGDLYWDGGLLSNTPVEAIFDMRPRRSALIFAV
DVWNPDGPEPESIWRVINRQKDIQYSSRAMTQIIRQRQIHRLRHIIAELSKRIPEPERQSPEVREMASYGCQTRMHVVHL
LAPLLEGEGHTKDIDFSQENIRRRWEAGISDARHALEVAPWEGDLDPLEGLYLHEFKHGTRGETIRKSWHTPLPTAAAAE
>Mature_399_residues
SDPITHASSKCEAVKSKLGQVVLVFQGGGALGAYQVGVYEALHAAGIEPDWLIGTSIGAVNASIIAGNQPQDRLDKLQTF
WRRVEYAPQVEAMSQWPLIGPWLANWNTVTTGINGFFTPNPMAFMGMYVPLAPDAAGYYSIAPLQETLEELVDFSYLSEG
KPRLTVGAAKVRTCEMRYFDSKDMPLTVHHIMASGALPPAFPPVRIDGDLYWDGGLLSNTPVEAIFDMRPRRSALIFAVD
VWNPDGPEPESIWRVINRQKDIQYSSRAMTQIIRQRQIHRLRHIIAELSKRIPEPERQSPEVREMASYGCQTRMHVVHLL
APLLEGEGHTKDIDFSQENIRRRWEAGISDARHALEVAPWEGDLDPLEGLYLHEFKHGTRGETIRKSWHTPLPTAAAAE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44754; Mature: 44623

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPITHASSKCEAVKSKLGQVVLVFQGGGALGAYQVGVYEALHAAGIEPDWLIGTSIGA
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
VNASIIAGNQPQDRLDKLQTFWRRVEYAPQVEAMSQWPLIGPWLANWNTVTTGINGFFTP
CEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHCCCCEEECCCCCCCCC
NPMAFMGMYVPLAPDAAGYYSIAPLQETLEELVDFSYLSEGKPRLTVGAAKVRTCEMRYF
CCHHHHEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECHHHHEEEEEEEC
DSKDMPLTVHHIMASGALPPAFPPVRIDGDLYWDGGLLSNTPVEAIFDMRPRRSALIFAV
CCCCCCEEHHHHHHCCCCCCCCCCEEECCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEE
DVWNPDGPEPESIWRVINRQKDIQYSSRAMTQIIRQRQIHRLRHIIAELSKRIPEPERQS
EECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PEVREMASYGCQTRMHVVHLLAPLLEGEGHTKDIDFSQENIRRRWEAGISDARHALEVAP
CHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHEEECC
WEGDLDPLEGLYLHEFKHGTRGETIRKSWHTPLPTAAAAE
CCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SDPITHASSKCEAVKSKLGQVVLVFQGGGALGAYQVGVYEALHAAGIEPDWLIGTSIGA
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
VNASIIAGNQPQDRLDKLQTFWRRVEYAPQVEAMSQWPLIGPWLANWNTVTTGINGFFTP
CEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHCCCCEEECCCCCCCCC
NPMAFMGMYVPLAPDAAGYYSIAPLQETLEELVDFSYLSEGKPRLTVGAAKVRTCEMRYF
CCHHHHEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECHHHHEEEEEEEC
DSKDMPLTVHHIMASGALPPAFPPVRIDGDLYWDGGLLSNTPVEAIFDMRPRRSALIFAV
CCCCCCEEHHHHHHCCCCCCCCCCEEECCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEE
DVWNPDGPEPESIWRVINRQKDIQYSSRAMTQIIRQRQIHRLRHIIAELSKRIPEPERQS
EECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PEVREMASYGCQTRMHVVHLLAPLLEGEGHTKDIDFSQENIRRRWEAGISDARHALEVAP
CHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHEEECC
WEGDLDPLEGLYLHEFKHGTRGETIRKSWHTPLPTAAAAE
CCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA