| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678822
Identifier: 182678822
GI number: 182678822
Start: 2113810
End: 2114997
Strand: Direct
Name: 182678822
Synonym: Bind_1855
Alternate gene names: NA
Gene position: 2113810-2114997 (Clockwise)
Preceding gene: 182678821
Following gene: 182678823
Centisome position: 50.69
GC content: 54.55
Gene sequence:
>1188_bases ATGGACGCTCGTTCACACCTATCAATTTTCGCACACCTATCAATTTTCGGAACAACGGTTTGTCTCATTGCGACAATATC CGTTCCTGTCAGCGCTCAATCGGCGCCTCCGGCGATTGCCAATAATCCCGTCGCGGCATTGCCCGTAAATATCCCTCCGC CTGGCAGCATCAGTGCTGACCATCCGCTGGGCGTGTCTATTGTGCCTCCGCCTCCGCCAGGCTTCGATCCCATGACAGCG TCAGTGCAAGCCAACACGCATTACGCGATTCCGCCTCGACCTGATATCGCTATTGCTCCGGCAGCCTTCAGCCGTTGGCA AAGGGCCGTGGCCGCTCCGCTGGCGGCAGGAAGCGCCAATGGCCCGACTCCGATACTGACGCCGACGAACGTTTCGAATA GCCCAGTGCGATTACAAGGGCCGCTCATTCCCTTTGCGAACAGCATCGCCAACGGCCCAAACACAAACGGCGCTTTCAAC GCTATTTACACAGGCACGTCTTACAATTGGAGCGGAAACGCAATTTATAATTCACTCAACCCTTTCAAGGTTGAGGCTAT CATCGGCGAGTTTGTCGTGCCGACGGCGCGCCAAGCCTACGGAACCTGCACGGGAGATTGGGTCTATTCGTCTCAATGGC CCGGCATTGACGGCTATGGTTCTGGTGACGTTCTGCAGGCCGGTGTTGAGGCCGACGCTTATTGCAATGGAGGCACCACA GCAAGCTTCTACTCTGCGTGGATCGAGTGGTATCCTTTTCCAGAGACAAGGGTCAGTGTTCCAGCTGTCCATCCTGGTGA TCTGGTTTTTATAGAACTCTGGAACACGAGCGCAACCAACGGCTACGCTTACATTTACAATTATTCCACTCGCGAGACCG CCACATATCAGCTCACACCACCATCCGGCGTCTCACTGCAAGGCAACAGCGTTGAATGGATTGTAGAACGCCCCGGTGTC GGCGACGGCCTCGCTACTCTGACGAATTATATCAATGTCTCATGGCCGCATGGCATTGCATGGGACTATGCGGCGCGTTC ACCAACTTATTATTGGCAAGGGGGCACCCCCGCCTCTGGATCCTTGGTCGTCCTCACAATGCTCGATAATGCGGGGCAAA GGATATCCTCGCCCATCATCGAGAACTTCAACTTTCTCTATTTTTACAATTACGGTTCCTCCAACTGA
Upstream 100 bases:
>100_bases CTCACTTTACAATGATGACCCTGACCGTAAGCTTCAGGGGAGCATTTTTCTAAAATTATATGCCCGTTTTTATTGATAGA AATTGCGTGAGGGCAACATA
Downstream 100 bases:
>100_bases GGTGTTGGCCCCAACCCCATTGGGAGGATAAAGATTAACCGATCAAAGCTTTCACCCCACGGTTTTACAGGCTCTCCTTG GTCCTTATTGTGTAGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MDARSHLSIFAHLSIFGTTVCLIATISVPVSAQSAPPAIANNPVAALPVNIPPPGSISADHPLGVSIVPPPPPGFDPMTA SVQANTHYAIPPRPDIAIAPAAFSRWQRAVAAPLAAGSANGPTPILTPTNVSNSPVRLQGPLIPFANSIANGPNTNGAFN AIYTGTSYNWSGNAIYNSLNPFKVEAIIGEFVVPTARQAYGTCTGDWVYSSQWPGIDGYGSGDVLQAGVEADAYCNGGTT ASFYSAWIEWYPFPETRVSVPAVHPGDLVFIELWNTSATNGYAYIYNYSTRETATYQLTPPSGVSLQGNSVEWIVERPGV GDGLATLTNYINVSWPHGIAWDYAARSPTYYWQGGTPASGSLVVLTMLDNAGQRISSPIIENFNFLYFYNYGSSN
Sequences:
>Translated_395_residues MDARSHLSIFAHLSIFGTTVCLIATISVPVSAQSAPPAIANNPVAALPVNIPPPGSISADHPLGVSIVPPPPPGFDPMTA SVQANTHYAIPPRPDIAIAPAAFSRWQRAVAAPLAAGSANGPTPILTPTNVSNSPVRLQGPLIPFANSIANGPNTNGAFN AIYTGTSYNWSGNAIYNSLNPFKVEAIIGEFVVPTARQAYGTCTGDWVYSSQWPGIDGYGSGDVLQAGVEADAYCNGGTT ASFYSAWIEWYPFPETRVSVPAVHPGDLVFIELWNTSATNGYAYIYNYSTRETATYQLTPPSGVSLQGNSVEWIVERPGV GDGLATLTNYINVSWPHGIAWDYAARSPTYYWQGGTPASGSLVVLTMLDNAGQRISSPIIENFNFLYFYNYGSSN >Mature_395_residues MDARSHLSIFAHLSIFGTTVCLIATISVPVSAQSAPPAIANNPVAALPVNIPPPGSISADHPLGVSIVPPPPPGFDPMTA SVQANTHYAIPPRPDIAIAPAAFSRWQRAVAAPLAAGSANGPTPILTPTNVSNSPVRLQGPLIPFANSIANGPNTNGAFN AIYTGTSYNWSGNAIYNSLNPFKVEAIIGEFVVPTARQAYGTCTGDWVYSSQWPGIDGYGSGDVLQAGVEADAYCNGGTT ASFYSAWIEWYPFPETRVSVPAVHPGDLVFIELWNTSATNGYAYIYNYSTRETATYQLTPPSGVSLQGNSVEWIVERPGV GDGLATLTNYINVSWPHGIAWDYAARSPTYYWQGGTPASGSLVVLTMLDNAGQRISSPIIENFNFLYFYNYGSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41930; Mature: 41930
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARSHLSIFAHLSIFGTTVCLIATISVPVSAQSAPPAIANNPVAALPVNIPPPGSISAD CCCHHHEEEEEHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC HPLGVSIVPPPPPGFDPMTASVQANTHYAIPPRPDIAIAPAAFSRWQRAVAAPLAAGSAN CCCCEEEECCCCCCCCCCEEEEECCEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCCCC GPTPILTPTNVSNSPVRLQGPLIPFANSIANGPNTNGAFNAIYTGTSYNWSGNAIYNSLN CCCCEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCC PFKVEAIIGEFVVPTARQAYGTCTGDWVYSSQWPGIDGYGSGDVLQAGVEADAYCNGGTT CEEEEEEHHHHCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCC ASFYSAWIEWYPFPETRVSVPAVHPGDLVFIELWNTSATNGYAYIYNYSTRETATYQLTP HHHHHEEHEEECCCCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECC PSGVSLQGNSVEWIVERPGVGDGLATLTNYINVSWPHGIAWDYAARSPTYYWQGGTPASG CCCCEEECCCEEEEEECCCCCCHHHHHHHHEEEECCCCCEECCCCCCCCEEECCCCCCCC SLVVLTMLDNAGQRISSPIIENFNFLYFYNYGSSN CEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MDARSHLSIFAHLSIFGTTVCLIATISVPVSAQSAPPAIANNPVAALPVNIPPPGSISAD CCCHHHEEEEEHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC HPLGVSIVPPPPPGFDPMTASVQANTHYAIPPRPDIAIAPAAFSRWQRAVAAPLAAGSAN CCCCEEEECCCCCCCCCCEEEEECCEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCCCC GPTPILTPTNVSNSPVRLQGPLIPFANSIANGPNTNGAFNAIYTGTSYNWSGNAIYNSLN CCCCEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCC PFKVEAIIGEFVVPTARQAYGTCTGDWVYSSQWPGIDGYGSGDVLQAGVEADAYCNGGTT CEEEEEEHHHHCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCC ASFYSAWIEWYPFPETRVSVPAVHPGDLVFIELWNTSATNGYAYIYNYSTRETATYQLTP HHHHHEEHEEECCCCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECC PSGVSLQGNSVEWIVERPGVGDGLATLTNYINVSWPHGIAWDYAARSPTYYWQGGTPASG CCCCEEECCCEEEEEECCCCCCHHHHHHHHEEEECCCCCEECCCCCCCCEEECCCCCCCC SLVVLTMLDNAGQRISSPIIENFNFLYFYNYGSSN CEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA