Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is plcN [H]

Identifier: 182678806

GI number: 182678806

Start: 2090393

End: 2092516

Strand: Direct

Name: plcN [H]

Synonym: Bind_1837

Alternate gene names: 182678806

Gene position: 2090393-2092516 (Clockwise)

Preceding gene: 182678805

Following gene: 182678807

Centisome position: 50.13

GC content: 58.95

Gene sequence:

>2124_bases
ATGACCGAATCCGATCGCCGGAGTTTCCTCAAGCTCGTCGCTTCAGGCGCCATGGCGGGGACATTGCAACAGAGCATCGG
CAAGGCATTGGCCCTGCCCGCCAACAACCGCACGCGGTCGATTGATGACATTGAGCATGTCATCTTCCTCATGCAGGAGA
ACCGCTCGTTCGATCATTATTTCGGCATGTTGCAGGGCGTTCGCGGCTTCAACGATCCGCGCGCCGTGCGTCTGTCTTCC
GGCGCCCTCGTATGGAGCCAGCCCAACGGAAGCAGCGTCGTCATGCCCTTCCATCCAGATGCTCCCGATATGGGCATGCA
GTTCCTCGAAGACCTGCCGCATGGCTGGGAGGACACGCATAATGCCTGGAACAAGGGTCAATGGGATGGCTGGATCCCCG
CGAAGAGCGCAACCTGCATGGCGCATCTCACGCGCCAGGACATTCCCTTCCATTACGCGCTTGCTGACGCCTTCACGATC
TGCGACGCCTATCATTGTTCGATATTGAGCTCGACCGACCCCAACCGCTATTACATGTGGACTGGCTGGGTTGGTAATGA
CGGCTCTGGCGGCGGACCGGTGCTCGATAATGCGGAAGCCGGCTATGGCTGGCACACTTATCCAGAGCGTCTCGAAGCCG
CCGGCGTCTCCTGGAAAATATATCAGGATATTGGCGTCGGGCTCACCGCCGATGGATATTGGGGTTGGACGAGCAATCCC
TATATCGGCAATTATGGCGATAATTCGCTGCTCTATTTCCATCAGTATCAGAATGCGCCGTCCTCCTCGCCGCTGGCGCA
AAAGGCCCGCACCGGAACCAATATTTCTGCTTCCGGTACATTGTTCGACATCTTCAAAAACGACGTTCAGTCCGGCAAGC
TGCCCCAGGTATCCTGGATCGCCGCTCCCGAAGCCTATACAGAACATCCGAATTGGCCGGCCAATTACGGCGCTTGGTAT
GTCTCGCAGATCCTCGACATTCTGACGGAGCGGCCGGACGTCTGGAGCAAGACCGCGCTCTTCCTCATGTATGATGAGAA
TGACGGCTTCTTCGATCATGTGGTCCCCCCGGTTCCGCCGATGAGCGCGGATTACGGCAATTCGACTGTGTCCATCGCCA
ATGAGATCTTCCCGGGCAGCTCCAATTATCATAGCGCGCCCTACGGACTTGGCGTGCGGGTGCCTATGGTCGTCATCTCT
CCCTGGAGCCGCGGTGGCTGGGTCAATTCCGAGGTTTTCGACCACAGCTCGCTGGTCCGCTTCCTCGAAGCCCGCTTCGC
CCGCCATTATCCGGGCCTGATCGAGCCCAACATCACTCCCTGGCGCCGCACAGTCACAGGCGATCTGACCTCGACCTTCG
ATTTCAAGACGCCCAATGCCTTTAAGGTGGCTCTGCCCTCGACGAAATCCTATGCGCCTGTGGATGCAAACCGTCACAAC
AGCTACGTTCCGGCCGTCCCGACGAAGCAGCAAGTGCCAGAGCAGGAGTCCGGCATCCGCCCCGCGCGCGCCCTGCCATA
TGATCTGCAGGTCCAGTCCATACCTCAGGCTAACGCGTCCAAAATCACGCTCGTTTTCCGCAATACCGGCGAAGCGGGAG
CGGTGTTTCATATCCGTGATGCTTCGGGCAGGACGCCGCCCCATTCCTTCACGGTCGAGTCCCGCAAGGAACTGAGCGAT
GTCTGGACCAGCGCCGCAGATGGTTCCTACGATCTCTCGGTCTACGGTCCCAACGGCTTTTACCGTCACTTCAAAGGCAA
TTTGAAAGGAGCGAGCTTCGCACAGATCAGCGTCAATACGAGGACTGATCGCCTTGCGCAAATGCTGCTCATCGATCTGG
CGAACGTCGGCTATACCACCGCGCGGCTGATCTTGACCAATGCTTACACCGGCGCGGTCATCCGTCACCAAGTGGTCAAA
CCGTCGCAATCGCATGTGGTGACGGATTGGGCCCTCGAAGCTGGCGGCTGGTATGACATCACTGTCGAGATCGAAGGCGA
TCAGAGCTTCAAGGCTCAGCTGGCCGGCCATATCGAGAATGGCCGCGACAGCATCACCGACCCGCTGATGGGCCGCGTGC
CCTTCCCGCTGCCGCAGCGACAAGCCGCCGCCGGTGACGAATAG

Upstream 100 bases:

>100_bases
AACGGGACGAACTATCCACAGGGTCGTCTCGGATACTGACAGAGTACTGTCACCAACATCCGCTAGAGCTGCATGCAATG
CCACCCACCTGAGACATATC

Downstream 100 bases:

>100_bases
TCAATAACTCATGGCGGAATCCTAAATTGTTAAGGGTGTCAGGTAGCCGTTAACGACGCGACTCTTGGGAATACTGAAGC
GTAGCATCAGTATTCCTGAC

Product: phospholipase C, phosphocholine-specific

Products: NA

Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MTESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHYFGMLQGVRGFNDPRAVRLSS
GALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTHNAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTI
CDAYHCSILSSTDPNRYYMWTGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP
YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWIAAPEAYTEHPNWPANYGAWY
VSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPPMSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVIS
PWSRGGWVNSEVFDHSSLVRFLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN
SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRDASGRTPPHSFTVESRKELSD
VWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNTRTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVK
PSQSHVVTDWALEAGGWYDITVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE

Sequences:

>Translated_707_residues
MTESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHYFGMLQGVRGFNDPRAVRLSS
GALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTHNAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTI
CDAYHCSILSSTDPNRYYMWTGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP
YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWIAAPEAYTEHPNWPANYGAWY
VSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPPMSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVIS
PWSRGGWVNSEVFDHSSLVRFLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN
SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRDASGRTPPHSFTVESRKELSD
VWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNTRTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVK
PSQSHVVTDWALEAGGWYDITVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE
>Mature_706_residues
TESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHYFGMLQGVRGFNDPRAVRLSSG
ALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTHNAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTIC
DAYHCSILSSTDPNRYYMWTGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNPY
IGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWIAAPEAYTEHPNWPANYGAWYV
SQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPPMSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVISP
WSRGGWVNSEVFDHSSLVRFLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHNS
YVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRDASGRTPPHSFTVESRKELSDV
WTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNTRTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVKP
SQSHVVTDWALEAGGWYDITVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE

Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR008475
- InterPro:   IPR017767
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 78134; Mature: 78003

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHY
CCCHHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCCCCHHHHHEEEEEEECCCCHHHH
FGMLQGVRGFNDPRAVRLSSGALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTH
HHHHHHCCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHH
NAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTICDAYHCSILSSTDPNRYYMW
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHEEEECCCCCCEEEEE
TGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCC
YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWI
EECCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
AAPEAYTEHPNWPANYGAWYVSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPP
ECCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCCCCC
MSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVISPWSRGGWVNSEVFDHSSLVR
CCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH
FLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN
HHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCC
SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRD
CCCCCCCCHHHCCCHHHCCCCHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC
ASGRTPPHSFTVESRKELSDVWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNT
CCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEECC
RTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVKPSQSHVVTDWALEAGGWYDI
HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEE
TVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE
EEEECCCCCHHHHHHHHHCCCCHHHCCCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHY
CCHHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCCCCHHHHHEEEEEEECCCCHHHH
FGMLQGVRGFNDPRAVRLSSGALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTH
HHHHHHCCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHH
NAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTICDAYHCSILSSTDPNRYYMW
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHEEEECCCCCCEEEEE
TGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCC
YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWI
EECCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
AAPEAYTEHPNWPANYGAWYVSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPP
ECCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCCCCC
MSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVISPWSRGGWVNSEVFDHSSLVR
CCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH
FLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN
HHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCC
SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRD
CCCCCCCCHHHCCCHHHCCCCHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC
ASGRTPPHSFTVESRKELSDVWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNT
CCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEECC
RTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVKPSQSHVVTDWALEAGGWYDI
HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEE
TVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE
EEEECCCCCHHHHHHHHHCCCCHHHCCCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10523590 [H]