| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is plcN [H]
Identifier: 182678806
GI number: 182678806
Start: 2090393
End: 2092516
Strand: Direct
Name: plcN [H]
Synonym: Bind_1837
Alternate gene names: 182678806
Gene position: 2090393-2092516 (Clockwise)
Preceding gene: 182678805
Following gene: 182678807
Centisome position: 50.13
GC content: 58.95
Gene sequence:
>2124_bases ATGACCGAATCCGATCGCCGGAGTTTCCTCAAGCTCGTCGCTTCAGGCGCCATGGCGGGGACATTGCAACAGAGCATCGG CAAGGCATTGGCCCTGCCCGCCAACAACCGCACGCGGTCGATTGATGACATTGAGCATGTCATCTTCCTCATGCAGGAGA ACCGCTCGTTCGATCATTATTTCGGCATGTTGCAGGGCGTTCGCGGCTTCAACGATCCGCGCGCCGTGCGTCTGTCTTCC GGCGCCCTCGTATGGAGCCAGCCCAACGGAAGCAGCGTCGTCATGCCCTTCCATCCAGATGCTCCCGATATGGGCATGCA GTTCCTCGAAGACCTGCCGCATGGCTGGGAGGACACGCATAATGCCTGGAACAAGGGTCAATGGGATGGCTGGATCCCCG CGAAGAGCGCAACCTGCATGGCGCATCTCACGCGCCAGGACATTCCCTTCCATTACGCGCTTGCTGACGCCTTCACGATC TGCGACGCCTATCATTGTTCGATATTGAGCTCGACCGACCCCAACCGCTATTACATGTGGACTGGCTGGGTTGGTAATGA CGGCTCTGGCGGCGGACCGGTGCTCGATAATGCGGAAGCCGGCTATGGCTGGCACACTTATCCAGAGCGTCTCGAAGCCG CCGGCGTCTCCTGGAAAATATATCAGGATATTGGCGTCGGGCTCACCGCCGATGGATATTGGGGTTGGACGAGCAATCCC TATATCGGCAATTATGGCGATAATTCGCTGCTCTATTTCCATCAGTATCAGAATGCGCCGTCCTCCTCGCCGCTGGCGCA AAAGGCCCGCACCGGAACCAATATTTCTGCTTCCGGTACATTGTTCGACATCTTCAAAAACGACGTTCAGTCCGGCAAGC TGCCCCAGGTATCCTGGATCGCCGCTCCCGAAGCCTATACAGAACATCCGAATTGGCCGGCCAATTACGGCGCTTGGTAT GTCTCGCAGATCCTCGACATTCTGACGGAGCGGCCGGACGTCTGGAGCAAGACCGCGCTCTTCCTCATGTATGATGAGAA TGACGGCTTCTTCGATCATGTGGTCCCCCCGGTTCCGCCGATGAGCGCGGATTACGGCAATTCGACTGTGTCCATCGCCA ATGAGATCTTCCCGGGCAGCTCCAATTATCATAGCGCGCCCTACGGACTTGGCGTGCGGGTGCCTATGGTCGTCATCTCT CCCTGGAGCCGCGGTGGCTGGGTCAATTCCGAGGTTTTCGACCACAGCTCGCTGGTCCGCTTCCTCGAAGCCCGCTTCGC CCGCCATTATCCGGGCCTGATCGAGCCCAACATCACTCCCTGGCGCCGCACAGTCACAGGCGATCTGACCTCGACCTTCG ATTTCAAGACGCCCAATGCCTTTAAGGTGGCTCTGCCCTCGACGAAATCCTATGCGCCTGTGGATGCAAACCGTCACAAC AGCTACGTTCCGGCCGTCCCGACGAAGCAGCAAGTGCCAGAGCAGGAGTCCGGCATCCGCCCCGCGCGCGCCCTGCCATA TGATCTGCAGGTCCAGTCCATACCTCAGGCTAACGCGTCCAAAATCACGCTCGTTTTCCGCAATACCGGCGAAGCGGGAG CGGTGTTTCATATCCGTGATGCTTCGGGCAGGACGCCGCCCCATTCCTTCACGGTCGAGTCCCGCAAGGAACTGAGCGAT GTCTGGACCAGCGCCGCAGATGGTTCCTACGATCTCTCGGTCTACGGTCCCAACGGCTTTTACCGTCACTTCAAAGGCAA TTTGAAAGGAGCGAGCTTCGCACAGATCAGCGTCAATACGAGGACTGATCGCCTTGCGCAAATGCTGCTCATCGATCTGG CGAACGTCGGCTATACCACCGCGCGGCTGATCTTGACCAATGCTTACACCGGCGCGGTCATCCGTCACCAAGTGGTCAAA CCGTCGCAATCGCATGTGGTGACGGATTGGGCCCTCGAAGCTGGCGGCTGGTATGACATCACTGTCGAGATCGAAGGCGA TCAGAGCTTCAAGGCTCAGCTGGCCGGCCATATCGAGAATGGCCGCGACAGCATCACCGACCCGCTGATGGGCCGCGTGC CCTTCCCGCTGCCGCAGCGACAAGCCGCCGCCGGTGACGAATAG
Upstream 100 bases:
>100_bases AACGGGACGAACTATCCACAGGGTCGTCTCGGATACTGACAGAGTACTGTCACCAACATCCGCTAGAGCTGCATGCAATG CCACCCACCTGAGACATATC
Downstream 100 bases:
>100_bases TCAATAACTCATGGCGGAATCCTAAATTGTTAAGGGTGTCAGGTAGCCGTTAACGACGCGACTCTTGGGAATACTGAAGC GTAGCATCAGTATTCCTGAC
Product: phospholipase C, phosphocholine-specific
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MTESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHYFGMLQGVRGFNDPRAVRLSS GALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTHNAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTI CDAYHCSILSSTDPNRYYMWTGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWIAAPEAYTEHPNWPANYGAWY VSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPPMSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVIS PWSRGGWVNSEVFDHSSLVRFLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRDASGRTPPHSFTVESRKELSD VWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNTRTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVK PSQSHVVTDWALEAGGWYDITVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE
Sequences:
>Translated_707_residues MTESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHYFGMLQGVRGFNDPRAVRLSS GALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTHNAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTI CDAYHCSILSSTDPNRYYMWTGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWIAAPEAYTEHPNWPANYGAWY VSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPPMSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVIS PWSRGGWVNSEVFDHSSLVRFLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRDASGRTPPHSFTVESRKELSD VWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNTRTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVK PSQSHVVTDWALEAGGWYDITVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE >Mature_706_residues TESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHYFGMLQGVRGFNDPRAVRLSSG ALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTHNAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTIC DAYHCSILSSTDPNRYYMWTGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNPY IGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWIAAPEAYTEHPNWPANYGAWYV SQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPPMSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVISP WSRGGWVNSEVFDHSSLVRFLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHNS YVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRDASGRTPPHSFTVESRKELSDV WTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNTRTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVKP SQSHVVTDWALEAGGWYDITVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 78134; Mature: 78003
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHY CCCHHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCCCCHHHHHEEEEEEECCCCHHHH FGMLQGVRGFNDPRAVRLSSGALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTH HHHHHHCCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHH NAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTICDAYHCSILSSTDPNRYYMW CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHEEEECCCCCCEEEEE TGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCC YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWI EECCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE AAPEAYTEHPNWPANYGAWYVSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPP ECCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCCCCC MSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVISPWSRGGWVNSEVFDHSSLVR CCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH FLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN HHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCC SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRD CCCCCCCCHHHCCCHHHCCCCHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC ASGRTPPHSFTVESRKELSDVWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNT CCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEECC RTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVKPSQSHVVTDWALEAGGWYDI HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEE TVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE EEEECCCCCHHHHHHHHHCCCCHHHCCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TESDRRSFLKLVASGAMAGTLQQSIGKALALPANNRTRSIDDIEHVIFLMQENRSFDHY CCHHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCCCCHHHHHEEEEEEECCCCHHHH FGMLQGVRGFNDPRAVRLSSGALVWSQPNGSSVVMPFHPDAPDMGMQFLEDLPHGWEDTH HHHHHHCCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHH NAWNKGQWDGWIPAKSATCMAHLTRQDIPFHYALADAFTICDAYHCSILSSTDPNRYYMW CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHEEEECCCCCCEEEEE TGWVGNDGSGGGPVLDNAEAGYGWHTYPERLEAAGVSWKIYQDIGVGLTADGYWGWTSNP EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCC YIGNYGDNSLLYFHQYQNAPSSSPLAQKARTGTNISASGTLFDIFKNDVQSGKLPQVSWI EECCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE AAPEAYTEHPNWPANYGAWYVSQILDILTERPDVWSKTALFLMYDENDGFFDHVVPPVPP ECCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCCCCC MSADYGNSTVSIANEIFPGSSNYHSAPYGLGVRVPMVVISPWSRGGWVNSEVFDHSSLVR CCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH FLEARFARHYPGLIEPNITPWRRTVTGDLTSTFDFKTPNAFKVALPSTKSYAPVDANRHN HHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCC SYVPAVPTKQQVPEQESGIRPARALPYDLQVQSIPQANASKITLVFRNTGEAGAVFHIRD CCCCCCCCHHHCCCHHHCCCCHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC ASGRTPPHSFTVESRKELSDVWTSAADGSYDLSVYGPNGFYRHFKGNLKGASFAQISVNT CCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEECC RTDRLAQMLLIDLANVGYTTARLILTNAYTGAVIRHQVVKPSQSHVVTDWALEAGGWYDI HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCEEEE TVEIEGDQSFKAQLAGHIENGRDSITDPLMGRVPFPLPQRQAAAGDE EEEECCCCCHHHHHHHHHCCCCHHHCCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]