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The map label for this gene is ydjA [H]

Identifier: 182678789

GI number: 182678789

Start: 2068501

End: 2069127

Strand: Direct

Name: ydjA [H]

Synonym: Bind_1818

Alternate gene names: 182678789

Gene position: 2068501-2069127 (Clockwise)

Preceding gene: 182678786

Following gene: 182678793

Centisome position: 49.6

GC content: 59.81

Gene sequence:

>627_bases
GTGGACCATAAACCTGTCTCAGATTATGTCCCGACATCCTTCTCCAAAGCCGGTGAACCCGTCATGAACGATATTCTCGC
ATTGCTCAAAACCCGCCGCTCGGCGCCGGCGGCCACTCTCAAGGCGCCAGGACCCAGCCCGCAGGACATCAACGCTATGC
TGGAAGTGGCGGCCAGGGTTCCAGACCACGGCAAGCTCGCGCCCTGGCGATTCATTGTGTTCGAGGGCGATGGACGTGAC
AGGGCCGGCACCCTTGTTGCCGAAGTCTATGCGAAAGCCCATCCAGATGCCGAGGCCGGCCGTATCGAGACAGAATTGAA
GCGATTCTCGCTAGCGCCGCTGGTGATTGGGGTTGTCTCCTCCGCGGCGGCGCATCCCAAAATTCCCGAATGGGAACAGG
TTCTTTCGGCCGGCGCGGTCTGCATGAACCTGATCATCGCCGCCAATGCCTTGGGATTTGCCTCGGTCTGGCTATCGGAA
TGGTATTCCTACGACCGCGAGGTTCTGTCCCGAATGGGGCTGGCCGAACACGAAAAAATCGCAGGCTTCATTCATATCGG
CTGCGCGGCTGGGCCACGCGAGGATCGTCCGCGCCCGAATCTGACCGAAATCGTGACGCGTTTTTGA

Upstream 100 bases:

>100_bases
CACGATGGGAGCTCCAAGGGGGCCACGCCCTCGCGGAAGTCACTTTATTTACCTGATAAGGTGACGGTTTTACGGCAACT
TCCTATTCTTTCCGCCGTGG

Downstream 100 bases:

>100_bases
TGCGGATATTCTGATGGAAGGTGACTGACGCTTAGAGCATCAGACCCAAAAGTGGCTCCCACTTTTGGGACCAATCTGAT
GCGTTTTCAGGAAGATAGAG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDHKPVSDYVPTSFSKAGEPVMNDILALLKTRRSAPAATLKAPGPSPQDINAMLEVAARVPDHGKLAPWRFIVFEGDGRD
RAGTLVAEVYAKAHPDAEAGRIETELKRFSLAPLVIGVVSSAAAHPKIPEWEQVLSAGAVCMNLIIAANALGFASVWLSE
WYSYDREVLSRMGLAEHEKIAGFIHIGCAAGPREDRPRPNLTEIVTRF

Sequences:

>Translated_208_residues
MDHKPVSDYVPTSFSKAGEPVMNDILALLKTRRSAPAATLKAPGPSPQDINAMLEVAARVPDHGKLAPWRFIVFEGDGRD
RAGTLVAEVYAKAHPDAEAGRIETELKRFSLAPLVIGVVSSAAAHPKIPEWEQVLSAGAVCMNLIIAANALGFASVWLSE
WYSYDREVLSRMGLAEHEKIAGFIHIGCAAGPREDRPRPNLTEIVTRF
>Mature_208_residues
MDHKPVSDYVPTSFSKAGEPVMNDILALLKTRRSAPAATLKAPGPSPQDINAMLEVAARVPDHGKLAPWRFIVFEGDGRD
RAGTLVAEVYAKAHPDAEAGRIETELKRFSLAPLVIGVVSSAAAHPKIPEWEQVLSAGAVCMNLIIAANALGFASVWLSE
WYSYDREVLSRMGLAEHEKIAGFIHIGCAAGPREDRPRPNLTEIVTRF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=164, Percent_Identity=35.9756097560976, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22578; Mature: 22578

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHKPVSDYVPTSFSKAGEPVMNDILALLKTRRSAPAATLKAPGPSPQDINAMLEVAARV
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHC
PDHGKLAPWRFIVFEGDGRDRAGTLVAEVYAKAHPDAEAGRIETELKRFSLAPLVIGVVS
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAAAHPKIPEWEQVLSAGAVCMNLIIAANALGFASVWLSEWYSYDREVLSRMGLAEHEKI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AGFIHIGCAAGPREDRPRPNLTEIVTRF
HEEEEECCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MDHKPVSDYVPTSFSKAGEPVMNDILALLKTRRSAPAATLKAPGPSPQDINAMLEVAARV
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHC
PDHGKLAPWRFIVFEGDGRDRAGTLVAEVYAKAHPDAEAGRIETELKRFSLAPLVIGVVS
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAAAHPKIPEWEQVLSAGAVCMNLIIAANALGFASVWLSEWYSYDREVLSRMGLAEHEKI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AGFIHIGCAAGPREDRPRPNLTEIVTRF
HEEEEECCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]