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The map label for this gene is pcaC [H]

Identifier: 182678734

GI number: 182678734

Start: 1995529

End: 1996248

Strand: Reverse

Name: pcaC [H]

Synonym: Bind_1761

Alternate gene names: 182678734

Gene position: 1996248-1995529 (Counterclockwise)

Preceding gene: 182678737

Following gene: 182678733

Centisome position: 47.87

GC content: 60.0

Gene sequence:

>720_bases
ATGTCTCACTCCCTCCCGAAAGGATCTACACTGACCGCGGACGAAATCCGGTCGGTTTCGCCAGGGCTCGCCCGGTACGC
GGAGGAGGATGGTCTTAAAGGATTGTGGCGGCGGCCTCAATTGTCGCTCAGGGATCGGAGCATCGTCACGGTCGCGATCC
TCATCGCCCGCAATCAGCCGGTGGATCTCCCCAACTACCTCACCGTCGCGTTGGACAATGGCGTAACGCCTGCCGAGATC
TCGGAGATTATCACCCATCTGGCGTTCTATGCGGGCTGGTCGAATGCAATGTCTGCGATCTCTATCACCAAGGATATTTT
CGCTCAGCGCAGTGTCGGCCCTGATCAGTTGCCGCCTGGCTCGCCGCAATTGCTTCCTCTCGATGAAGCTGCCGAGGTGC
AACGCGCCGCAAGCGTCGAGGCCAATGTTGGTTGGGTCTCGCCCGGGCTGGTTCAATACACCACCGATCCGCTTTTCAAG
GATCTCTGGCTTCGGCCGGGCTTGACGCCGCGTGACCGGAGCCTCGTCACCGTCAGCGCCCTGATCGCCAACGGCCAGGC
GGCGCAAATCACCTATCATCTCAACAGAGCTATGAACAACGGACTGACGCAGGAGCAGGCGGGTGAAGTCATCACCCAGG
CCGCCTTCTATGCAGGATGGCCCAATGCCTTCTCGGCGGCTTCAGTCGCCGGTGAAGTATTCAAGAGCCGCTCCAAATAG

Upstream 100 bases:

>100_bases
GCAATGGACACGGAAAGGACGGACGCAAGTGAAGCTGCTGACAACCTTTATTCTATCGCTCGCTTTAAGCGGCTCCGCGT
TTGCTCAAGGAGATGCCGGT

Downstream 100 bases:

>100_bases
AGAGAAAATCGCTATGAATGTTCGCTATGACTTTTCCGGACAGGTCGCTCTGATCACGGGTGCTGCCTCAGGTATGGGCT
TGACCACTGCAAAGGCTTTT

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSHSLPKGSTLTADEIRSVSPGLARYAEEDGLKGLWRRPQLSLRDRSIVTVAILIARNQPVDLPNYLTVALDNGVTPAEI
SEIITHLAFYAGWSNAMSAISITKDIFAQRSVGPDQLPPGSPQLLPLDEAAEVQRAASVEANVGWVSPGLVQYTTDPLFK
DLWLRPGLTPRDRSLVTVSALIANGQAAQITYHLNRAMNNGLTQEQAGEVITQAAFYAGWPNAFSAASVAGEVFKSRSK

Sequences:

>Translated_239_residues
MSHSLPKGSTLTADEIRSVSPGLARYAEEDGLKGLWRRPQLSLRDRSIVTVAILIARNQPVDLPNYLTVALDNGVTPAEI
SEIITHLAFYAGWSNAMSAISITKDIFAQRSVGPDQLPPGSPQLLPLDEAAEVQRAASVEANVGWVSPGLVQYTTDPLFK
DLWLRPGLTPRDRSLVTVSALIANGQAAQITYHLNRAMNNGLTQEQAGEVITQAAFYAGWPNAFSAASVAGEVFKSRSK
>Mature_238_residues
SHSLPKGSTLTADEIRSVSPGLARYAEEDGLKGLWRRPQLSLRDRSIVTVAILIARNQPVDLPNYLTVALDNGVTPAEIS
EIITHLAFYAGWSNAMSAISITKDIFAQRSVGPDQLPPGSPQLLPLDEAAEVQRAASVEANVGWVSPGLVQYTTDPLFKD
LWLRPGLTPRDRSLVTVSALIANGQAAQITYHLNRAMNNGLTQEQAGEVITQAAFYAGWPNAFSAASVAGEVFKSRSK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 25765; Mature: 25634

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSLPKGSTLTADEIRSVSPGLARYAEEDGLKGLWRRPQLSLRDRSIVTVAILIARNQP
CCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEECCCC
VDLPNYLTVALDNGVTPAEISEIITHLAFYAGWSNAMSAISITKDIFAQRSVGPDQLPPG
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SPQLLPLDEAAEVQRAASVEANVGWVSPGLVQYTTDPLFKDLWLRPGLTPRDRSLVTVSA
CCCEEECCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCEEHHH
LIANGQAAQITYHLNRAMNNGLTQEQAGEVITQAAFYAGWPNAFSAASVAGEVFKSRSK
HHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHSLPKGSTLTADEIRSVSPGLARYAEEDGLKGLWRRPQLSLRDRSIVTVAILIARNQP
CCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEECCCC
VDLPNYLTVALDNGVTPAEISEIITHLAFYAGWSNAMSAISITKDIFAQRSVGPDQLPPG
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SPQLLPLDEAAEVQRAASVEANVGWVSPGLVQYTTDPLFKDLWLRPGLTPRDRSLVTVSA
CCCEEECCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCEEHHH
LIANGQAAQITYHLNRAMNNGLTQEQAGEVITQAAFYAGWPNAFSAASVAGEVFKSRSK
HHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]