| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is pgsA [H]
Identifier: 182678686
GI number: 182678686
Start: 1934514
End: 1935110
Strand: Direct
Name: pgsA [H]
Synonym: Bind_1713
Alternate gene names: 182678686
Gene position: 1934514-1935110 (Clockwise)
Preceding gene: 182678685
Following gene: 182678687
Centisome position: 46.39
GC content: 58.63
Gene sequence:
>597_bases ATGGCGATTACCACGATCTCGCGAGGCTATGGGGGGACCTGGAGCCTGCCCAATATTTTGACTTATGGACGGCTGGTTGC TGTGCCACTGGTCGTCGGCTGCCTGTTCTGGTCGGAATTCGATATTATGCGCTGGACAGCGCTCGGCCTCTTCATCGTGG CCGGAATCACCGACTTTCTTGACGGCTATCTCGCTCGCGCGCTCGCTCAGCAATCGTCCCTCGGCCGTATGCTCGATCCG ATCGCCGATAAGCTTCTCGTCGCCGCGGTGATCGTCATGCTGGTGGCCGATCATACGTTGCGCAGCTATTCACTTTGCGC CGCCGTCGTCATTCTCTGCCGAGAAATCCTCGTCTCGGGCTTACGAGAATATCTCGCCGAACTCAAAGTGCCCGTGCCGG TCAGCAAAGTCGCCAAATGGAAGACCACGGTGCAGCTCGTGGCGCTCGGTTTTCTCATCGCTGGCCCGGCGGGTGAAAGG GTCCTTCCTGGCACGATCGTGATCGGCCTTGCCTTGTTCTGGGCCTCCGCGCTGCTTACCCTCTATACGGGTTGGGATTA TCTGCGCGCTGGGGTCAAGCATGTGATTGACGAATAA
Upstream 100 bases:
>100_bases TCCCGCGCGGCTTTGCCCGATCTCGAAAAAGTCCCGGGGATCAACGCCGCAAGCGCAAAGCTCATCTATGATTTTTTCCA CGAGCGTGGCAAATAGAGGC
Downstream 100 bases:
>100_bases AGCGCGCCGATCAAGGCAGGTATCGACGAGCGGCAATATGAAAGCGCTTTATTTTTCGTGGGTGCGCGAACGCATTGGCA AGAGCGAGGAAGACATAACA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAITTISRGYGGTWSLPNILTYGRLVAVPLVVGCLFWSEFDIMRWTALGLFIVAGITDFLDGYLARALAQQSSLGRMLDP IADKLLVAAVIVMLVADHTLRSYSLCAAVVILCREILVSGLREYLAELKVPVPVSKVAKWKTTVQLVALGFLIAGPAGER VLPGTIVIGLALFWASALLTLYTGWDYLRAGVKHVIDE
Sequences:
>Translated_198_residues MAITTISRGYGGTWSLPNILTYGRLVAVPLVVGCLFWSEFDIMRWTALGLFIVAGITDFLDGYLARALAQQSSLGRMLDP IADKLLVAAVIVMLVADHTLRSYSLCAAVVILCREILVSGLREYLAELKVPVPVSKVAKWKTTVQLVALGFLIAGPAGER VLPGTIVIGLALFWASALLTLYTGWDYLRAGVKHVIDE >Mature_197_residues AITTISRGYGGTWSLPNILTYGRLVAVPLVVGCLFWSEFDIMRWTALGLFIVAGITDFLDGYLARALAQQSSLGRMLDPI ADKLLVAAVIVMLVADHTLRSYSLCAAVVILCREILVSGLREYLAELKVPVPVSKVAKWKTTVQLVALGFLIAGPAGERV LPGTIVIGLALFWASALLTLYTGWDYLRAGVKHVIDE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Homo sapiens, GI188536108, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI10092647, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1788220, Length=190, Percent_Identity=37.3684210526316, Blast_Score=107, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6320059, Length=158, Percent_Identity=33.5443037974684, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21478; Mature: 21347
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITTISRGYGGTWSLPNILTYGRLVAVPLVVGCLFWSEFDIMRWTALGLFIVAGITDFL CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGYLARALAQQSSLGRMLDPIADKLLVAAVIVMLVADHTLRSYSLCAAVVILCREILVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREYLAELKVPVPVSKVAKWKTTVQLVALGFLIAGPAGERVLPGTIVIGLALFWASALLT HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LYTGWDYLRAGVKHVIDE HHHCHHHHHHHHHHHHCC >Mature Secondary Structure AITTISRGYGGTWSLPNILTYGRLVAVPLVVGCLFWSEFDIMRWTALGLFIVAGITDFL CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGYLARALAQQSSLGRMLDPIADKLLVAAVIVMLVADHTLRSYSLCAAVVILCREILVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREYLAELKVPVPVSKVAKWKTTVQLVALGFLIAGPAGERVLPGTIVIGLALFWASALLT HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LYTGWDYLRAGVKHVIDE HHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA