Click here to switch to the map view.

The map label for this gene is ycbC [H]

Identifier: 182678647

GI number: 182678647

Start: 1893533

End: 1894387

Strand: Reverse

Name: ycbC [H]

Synonym: Bind_1673

Alternate gene names: 182678647

Gene position: 1894387-1893533 (Counterclockwise)

Preceding gene: 182678648

Following gene: 182678646

Centisome position: 45.43

GC content: 56.61

Gene sequence:

>855_bases
ATGTTCTTCAATCTGTCCAAGATTTTTTGGCTTTTCGCCGAACCGGGCTCGTTCATAATCCTTCTTGGATTGCTCGGCCT
GATCCTGGTCTTCACCCCTTGGGTGAAAGCGGGCCAGCGCCTGCAAGCCATCGCTATTTTGCTCTTGGCTTTCGTGCTCC
TGACACCCTTTGGCGCTTTCGTTGTGCGTCCGCTGGAGGATCGGTTTCCCAATCCTGATCTTCATGCCATCGATCCCGCA
GGCATTATCGTGCTTGGCGGCGGTATGGATTCGCGGGAGTCGAAAGCGCGCGGTGTGCCGATCCTGAACACGGCGGGTTC
GCGGATGACGGCAGGCGTCGAATTGTCCCGGCTTTTCCCTCAGGCGAAACTCATCTTTACCGGAGGCAGCGGGGATTTGA
TGGGAGACCAGCCGAGCGAGTCCATCTATGCTCGTGAGCTTTGGCAGAACCTTGGCGTCCCTGCCGAGCAGATGGTTTTC
GAGGGCAATTCACGCAATACGTGGGAAAATGCCGTTTTCACGCGTGACCTGATCAAACCGAAGCCGGAAGACCGCTATCT
GCTTGTGACCTCTGCGGCCCATATGCCGCGTTCCGTCGGCATTTTTCGCAAGGTCGGCTTCAACGTCATTCCTTATAATG
CGAACTATATGACGATCGGCGATGCGCGGGATTGGAGCGTGACGACTTTGGCTCATGATCGTCTGAGGATGTTGTCCTTT
GGTCTGCGCGAATGGATCGGCCTCCTCGCTTATCGGCTGACGGGCAAGACATCGGATTTCTTCCCAGGGCCGGTTGAACA
AGCCGCAACCTACCCGCAGTCGCATGCCGCCCTTGAGGAAAGAACGGCGCGTTGA

Upstream 100 bases:

>100_bases
TCCCGCTCGATCGCAATCGCGCCGGTCCTCGACGGAAGGGATAGGTAATTTGGCCTGCCGGCCCTGCGATGACGGGTTGC
GCAATTGACCGGGTCTCCGC

Downstream 100 bases:

>100_bases
TATCCAGCCCGCGTCGAGGCGGTTCCTGCCTCTGCCTCCATCCCCTGTCGGAGAAATAGCGTGTCCCTGACGCTTGTCAT
CGCCAACAAGGCCTATTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFFNLSKIFWLFAEPGSFIILLGLLGLILVFTPWVKAGQRLQAIAILLLAFVLLTPFGAFVVRPLEDRFPNPDLHAIDPA
GIIVLGGGMDSRESKARGVPILNTAGSRMTAGVELSRLFPQAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQMVF
EGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANYMTIGDARDWSVTTLAHDRLRMLSF
GLREWIGLLAYRLTGKTSDFFPGPVEQAATYPQSHAALEERTAR

Sequences:

>Translated_284_residues
MFFNLSKIFWLFAEPGSFIILLGLLGLILVFTPWVKAGQRLQAIAILLLAFVLLTPFGAFVVRPLEDRFPNPDLHAIDPA
GIIVLGGGMDSRESKARGVPILNTAGSRMTAGVELSRLFPQAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQMVF
EGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANYMTIGDARDWSVTTLAHDRLRMLSF
GLREWIGLLAYRLTGKTSDFFPGPVEQAATYPQSHAALEERTAR
>Mature_284_residues
MFFNLSKIFWLFAEPGSFIILLGLLGLILVFTPWVKAGQRLQAIAILLLAFVLLTPFGAFVVRPLEDRFPNPDLHAIDPA
GIIVLGGGMDSRESKARGVPILNTAGSRMTAGVELSRLFPQAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQMVF
EGNSRNTWENAVFTRDLIKPKPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANYMTIGDARDWSVTTLAHDRLRMLSF
GLREWIGLLAYRLTGKTSDFFPGPVEQAATYPQSHAALEERTAR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=193, Percent_Identity=33.6787564766839, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 31515; Mature: 31515

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFNLSKIFWLFAEPGSFIILLGLLGLILVFTPWVKAGQRLQAIAILLLAFVLLTPFGAF
CEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VVRPLEDRFPNPDLHAIDPAGIIVLGGGMDSRESKARGVPILNTAGSRMTAGVELSRLFP
EECCHHHCCCCCCCEEECCCCEEEECCCCCCCCHHHCCCCEEECCCCCEECCCHHHHHCC
QAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQMVFEGNSRNTWENAVFTRDLIKP
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHHHHHHHHCCC
KPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANYMTIGDARDWSVTTLAHDRLRMLSF
CCCCCEEEEEECCCCCHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEHHHHHHHHHHHH
GLREWIGLLAYRLTGKTSDFFPGPVEQAATYPQSHAALEERTAR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFFNLSKIFWLFAEPGSFIILLGLLGLILVFTPWVKAGQRLQAIAILLLAFVLLTPFGAF
CEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VVRPLEDRFPNPDLHAIDPAGIIVLGGGMDSRESKARGVPILNTAGSRMTAGVELSRLFP
EECCHHHCCCCCCCEEECCCCEEEECCCCCCCCHHHCCCCEEECCCCCEECCCHHHHHCC
QAKLIFTGGSGDLMGDQPSESIYARELWQNLGVPAEQMVFEGNSRNTWENAVFTRDLIKP
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHHHHHHHHCCC
KPEDRYLLVTSAAHMPRSVGIFRKVGFNVIPYNANYMTIGDARDWSVTTLAHDRLRMLSF
CCCCCEEEEEECCCCCHHHHHHHHCCCEEEECCCCEEEECCCCCCEEEHHHHHHHHHHHH
GLREWIGLLAYRLTGKTSDFFPGPVEQAATYPQSHAALEERTAR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]