| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is fhs
Identifier: 182678628
GI number: 182678628
Start: 1870025
End: 1871692
Strand: Reverse
Name: fhs
Synonym: Bind_1654
Alternate gene names: 182678628
Gene position: 1871692-1870025 (Counterclockwise)
Preceding gene: 182678629
Following gene: 182678623
Centisome position: 44.88
GC content: 59.53
Gene sequence:
>1668_bases ATGTCCAGTGATCTGGAAATTGCCCGCGCCGCGAAACTTCGGCCGATTGCCACCGTCGCCGACGAGGCCAAGATTCCAGC CGAGGCGTTGCATTCCTATGGCCTGCATGTGGCCAAGATCGACACGAGCCTGTTGCCGAAAAAGGACCGCCCGGCCAAGC TAGTCCTTGTGACCGCCATCAATCCGACCCCGGCGGGCGAGGGCAAGACAACCACCACAATCGGACTCGGTGATGCCTTG CGCCGTCTCGGCAAGGCTTGTGTCATCGCTTTGCGTGAACCTTCGCTTGGTCCCTGTTTTGGGACCAAAGGGGGGGCCAC GGGCGGCGGTTACGCGCAGATCGTGCCGATGGAACGCATCAATCTGCATCTCACCGGCGATTTCCACGCGATCACCAGCG CGCATAATCTCCTCGCCGCCTTGATCGACAATCATCTTTACTGGGGCGCCGAGCCCAAAATCGATTCCCGCAAAGTCGCG TGGCGTCGCGTGCTCGACATGAACGACCGTGCCTTGCGTCAAATCGTGGTCGGTCTGGGGGGAGGGGGCAATGGCTACCC CCGTGAAACAGGTTTCGACATTACCGCCGCTTCCGAGATTATGGCGATCTTCTGCCTTTCGAAAGATCTCGCGGATCTGC AACAAAGGCTCGCACAAATCATCGTCGCGCAGGATGTCAACAAACAGCCCGTGCGTGCTGATGCGTTGCAGGCCGTCGGC GCCATGACAGTCCTGCTCAAGGACGCGCTCATGCCCAATCTGGTGCAAACGCTCGAAGGCACGCCCACTTTCGTTCATGG CGGTCCCTTTGCCAATATTGCCCATGGCTGCAATTCAGTGGCGGCGACGCTGGCCGCCATGCAACTTGGCGATTACGTCG TGACGGAAGCAGGCTTCGGCGCCGATTTGGGGGCCGAGAAATTTCTGGACATCAAATGCCGCCAGGCGGGGATCGCGCCC TCCGCGGCGGTGATCGTTGCGACGGCCCGTGCCTTGAAATCGCATGGCGGTGTCGCTCCGGCCGATCTCAATAAGGAAAA TCTCGACGCCCTCAAGGCGGGCCTCGCCAATCTCGGGCGCCATATCGCCAATGTCAAAAAGTTCGGGCTGCCGGTTGTCG TGGCGATCAATCATTTCCTTTCGGATACAGAGGCGGAACAGGAACTGATTGCGCATACATGCCGCGATGAATACGGGGTC GAGGCGATTGATTGCCGGCATTGGGCGGCCGGTGGCAAGGGCGCCCTGGCGCTGGCTGAAAAGGTGATCGCCTTGGTCGA GGGTGGCACGGCCCAATTCAAGATGCTGTATGAAGATACTTTGCCACTCATTGAGAAAATGCGCCGCATCGCGCAGGAAA TCTATGGCGCAGCGGATATTTCCCTGGACGCAAAGGCCAAGAAACAGCTTGCCGATATTGAGGCGCAGGGGTTCGGTCAT TTCCCGGTCTGTGTCGCGAAAACCCAATATTCCTTCGCTGCCGATCCGAAACTACTCGGCGCGCCAACGGGCCATATCGT ACCCATTCGCGAAGTCCGGCTCTCCGCCGGGGCCGGCTTCGTCGTGATGATCTGCGGTGACATCATGACCATGCCGGGGC TCTCCCGCCAGCCAGCGGCCTGGAAGATCGGCCTCGATGCGCAAGGTAATATTGAAGGGCTGTTTTAA
Upstream 100 bases:
>100_bases CCGTAACGGTGCCAACCGGCCGGCCATGGCGTCGAAACCTGTGCCGGACCGTCGTTTGACGCCCGTTTTCAATCGTTTGC TGTTTCGAGGACTTGTTCGA
Downstream 100 bases:
>100_bases AGGCTATCCGGATTCAGTTGTATTTGCCTCGTTGGATCGTCCTCATTACCAGAAGCTCAGTTTGTGTGTTTAGGATGGTC CACATGGCCCCTCCGCAACC
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSSDLEIARAAKLRPIATVADEAKIPAEALHSYGLHVAKIDTSLLPKKDRPAKLVLVTAINPTPAGEGKTTTTIGLGDAL RRLGKACVIALREPSLGPCFGTKGGATGGGYAQIVPMERINLHLTGDFHAITSAHNLLAALIDNHLYWGAEPKIDSRKVA WRRVLDMNDRALRQIVVGLGGGGNGYPRETGFDITAASEIMAIFCLSKDLADLQQRLAQIIVAQDVNKQPVRADALQAVG AMTVLLKDALMPNLVQTLEGTPTFVHGGPFANIAHGCNSVAATLAAMQLGDYVVTEAGFGADLGAEKFLDIKCRQAGIAP SAAVIVATARALKSHGGVAPADLNKENLDALKAGLANLGRHIANVKKFGLPVVVAINHFLSDTEAEQELIAHTCRDEYGV EAIDCRHWAAGGKGALALAEKVIALVEGGTAQFKMLYEDTLPLIEKMRRIAQEIYGAADISLDAKAKKQLADIEAQGFGH FPVCVAKTQYSFAADPKLLGAPTGHIVPIREVRLSAGAGFVVMICGDIMTMPGLSRQPAAWKIGLDAQGNIEGLF
Sequences:
>Translated_555_residues MSSDLEIARAAKLRPIATVADEAKIPAEALHSYGLHVAKIDTSLLPKKDRPAKLVLVTAINPTPAGEGKTTTTIGLGDAL RRLGKACVIALREPSLGPCFGTKGGATGGGYAQIVPMERINLHLTGDFHAITSAHNLLAALIDNHLYWGAEPKIDSRKVA WRRVLDMNDRALRQIVVGLGGGGNGYPRETGFDITAASEIMAIFCLSKDLADLQQRLAQIIVAQDVNKQPVRADALQAVG AMTVLLKDALMPNLVQTLEGTPTFVHGGPFANIAHGCNSVAATLAAMQLGDYVVTEAGFGADLGAEKFLDIKCRQAGIAP SAAVIVATARALKSHGGVAPADLNKENLDALKAGLANLGRHIANVKKFGLPVVVAINHFLSDTEAEQELIAHTCRDEYGV EAIDCRHWAAGGKGALALAEKVIALVEGGTAQFKMLYEDTLPLIEKMRRIAQEIYGAADISLDAKAKKQLADIEAQGFGH FPVCVAKTQYSFAADPKLLGAPTGHIVPIREVRLSAGAGFVVMICGDIMTMPGLSRQPAAWKIGLDAQGNIEGLF >Mature_554_residues SSDLEIARAAKLRPIATVADEAKIPAEALHSYGLHVAKIDTSLLPKKDRPAKLVLVTAINPTPAGEGKTTTTIGLGDALR RLGKACVIALREPSLGPCFGTKGGATGGGYAQIVPMERINLHLTGDFHAITSAHNLLAALIDNHLYWGAEPKIDSRKVAW RRVLDMNDRALRQIVVGLGGGGNGYPRETGFDITAASEIMAIFCLSKDLADLQQRLAQIIVAQDVNKQPVRADALQAVGA MTVLLKDALMPNLVQTLEGTPTFVHGGPFANIAHGCNSVAATLAAMQLGDYVVTEAGFGADLGAEKFLDIKCRQAGIAPS AAVIVATARALKSHGGVAPADLNKENLDALKAGLANLGRHIANVKKFGLPVVVAINHFLSDTEAEQELIAHTCRDEYGVE AIDCRHWAAGGKGALALAEKVIALVEGGTAQFKMLYEDTLPLIEKMRRIAQEIYGAADISLDAKAKKQLADIEAQGFGHF PVCVAKTQYSFAADPKLLGAPTGHIVPIREVRLSAGAGFVVMICGDIMTMPGLSRQPAAWKIGLDAQGNIEGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=621, Percent_Identity=44.2834138486312, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI36796743, Length=620, Percent_Identity=43.5483870967742, Blast_Score=451, Evalue=1e-127, Organism=Homo sapiens, GI310124614, Length=86, Percent_Identity=44.1860465116279, Blast_Score=83, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=44.6945337620579, Blast_Score=468, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=44.6945337620579, Blast_Score=468, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6319558, Length=631, Percent_Identity=42.1553090332805, Blast_Score=458, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=42.0127795527157, Blast_Score=452, Evalue=1e-128, Organism=Drosophila melanogaster, GI24645718, Length=620, Percent_Identity=45.4838709677419, Blast_Score=478, Evalue=1e-135, Organism=Drosophila melanogaster, GI17137370, Length=620, Percent_Identity=45.4838709677419, Blast_Score=478, Evalue=1e-135, Organism=Drosophila melanogaster, GI62472483, Length=620, Percent_Identity=45.8064516129032, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI45551871, Length=620, Percent_Identity=45.8064516129032, Blast_Score=476, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_BEII9 (B2IC30)
Other databases:
- EMBL: CP001016 - RefSeq: YP_001832774.1 - GeneID: 6200473 - GenomeReviews: CP001016_GR - KEGG: bid:Bind_1654 - HOGENOM: HBG677721 - OMA: VVASEVM - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 58603; Mature: 58471
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDLEIARAAKLRPIATVADEAKIPAEALHSYGLHVAKIDTSLLPKKDRPAKLVLVTAI CCCCCCHHHHHCCCCHHHHHCCCCCCHHHHHHCCCEEEEECHHHCCCCCCCCEEEEEEEE NPTPAGEGKTTTTIGLGDALRRLGKACVIALREPSLGPCFGTKGGATGGGYAQIVPMERI CCCCCCCCCCEEEEEHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHE NLHLTGDFHAITSAHNLLAALIDNHLYWGAEPKIDSRKVAWRRVLDMNDRALRQIVVGLG EEEEECCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHEEC GGGNGYPRETGFDITAASEIMAIFCLSKDLADLQQRLAQIIVAQDVNKQPVRADALQAVG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AMTVLLKDALMPNLVQTLEGTPTFVHGGPFANIAHGCNSVAATLAAMQLGDYVVTEAGFG HHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCC ADLGAEKFLDIKCRQAGIAPSAAVIVATARALKSHGGVAPADLNKENLDALKAGLANLGR CCCCCCHHEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH HIANVKKFGLPVVVAINHFLSDTEAEQELIAHTCRDEYGVEAIDCRHWAAGGKGALALAE HHHHHHHHCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECHHHCCCCCHHHHHHH KVIALVEGGTAQFKMLYEDTLPLIEKMRRIAQEIYGAADISLDAKAKKQLADIEAQGFGH HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC FPVCVAKTQYSFAADPKLLGAPTGHIVPIREVRLSAGAGFVVMICGDIMTMPGLSRQPAA CCEEEEECCCCCCCCCCEECCCCCCEEEHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCE WKIGLDAQGNIEGLF EEEECCCCCCCCCCC >Mature Secondary Structure SSDLEIARAAKLRPIATVADEAKIPAEALHSYGLHVAKIDTSLLPKKDRPAKLVLVTAI CCCCCHHHHHCCCCHHHHHCCCCCCHHHHHHCCCEEEEECHHHCCCCCCCCEEEEEEEE NPTPAGEGKTTTTIGLGDALRRLGKACVIALREPSLGPCFGTKGGATGGGYAQIVPMERI CCCCCCCCCCEEEEEHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHE NLHLTGDFHAITSAHNLLAALIDNHLYWGAEPKIDSRKVAWRRVLDMNDRALRQIVVGLG EEEEECCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHEEC GGGNGYPRETGFDITAASEIMAIFCLSKDLADLQQRLAQIIVAQDVNKQPVRADALQAVG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AMTVLLKDALMPNLVQTLEGTPTFVHGGPFANIAHGCNSVAATLAAMQLGDYVVTEAGFG HHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCC ADLGAEKFLDIKCRQAGIAPSAAVIVATARALKSHGGVAPADLNKENLDALKAGLANLGR CCCCCCHHEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH HIANVKKFGLPVVVAINHFLSDTEAEQELIAHTCRDEYGVEAIDCRHWAAGGKGALALAE HHHHHHHHCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECHHHCCCCCHHHHHHH KVIALVEGGTAQFKMLYEDTLPLIEKMRRIAQEIYGAADISLDAKAKKQLADIEAQGFGH HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC FPVCVAKTQYSFAADPKLLGAPTGHIVPIREVRLSAGAGFVVMICGDIMTMPGLSRQPAA CCEEEEECCCCCCCCCCEECCCCCCEEEHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCE WKIGLDAQGNIEGLF EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA