| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678622
Identifier: 182678622
GI number: 182678622
Start: 1863983
End: 1864618
Strand: Reverse
Name: 182678622
Synonym: Bind_1648
Alternate gene names: NA
Gene position: 1864618-1863983 (Counterclockwise)
Preceding gene: 182678623
Following gene: 182678621
Centisome position: 44.71
GC content: 37.58
Gene sequence:
>636_bases GTGGTCTCGTTAAAAATCAATACGCTCTTAGCCTACTATATATATTTAACGGGTTACCCCATGCCAGTAGAAAAAAATAA GCCCGATGAAATGTTTGAAATTGCGGCAAATATGTTCAGGCTGCATGGGTATTGTGACACTGATATTGACGATATTTCAA AAAAATGCTCTGTAAATTTATCGCTTATGCGTGAGATATTTAATACTAAAACGAATGTTGCACTAGAGATTATGTCTCAT ATACAAAACCACTTTGATTTTGAAATATTGATACATGCATATGATAAAAAACTGCCGGCTTATATACGAATTGAAAGTTT GAGTAAGGCGATCGAGGATTATTTCATTAAATGTAATGGCGGGTGTGTCTTTATAAAGTTTAGTATCGAGCAGATGAATA AAGATGACGCTTTTGTGGAGCCTATTAAGCGTTACTTTGATTCACTAAATGATGCGTATAAAGAGATCTTCCTGGAAGTT TATCAGCCTGATCAAGCTGTAGAAGTAGCTAGTAGAGTTGTTTCAGATTTACAGGGCGCCCTTATTATGATGCGTGTTGA TGGAGATATCTGGCCATTGCAGCAGTTCACGGAGCGACTCCTTACAAGGTTGCGGGCCGATATGTCTCACATGTGA
Upstream 100 bases:
>100_bases GGGCCTTTTCATGCCCCAAATATGCCACAAACAATAATGGAAAATTAACTCCTCGGAATATAATAGATTCCAGAGGCCAA GTTATCTGGTTGAAGACTTT
Downstream 100 bases:
>100_bases TTTAGAAATATTATGATAGAAATGACGAATTAACTAACTAAAACCATATCTTATGAAGATATGGAGAGCTGCGCTTCAGC TTCACGAAATACTTGCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MVSLKINTLLAYYIYLTGYPMPVEKNKPDEMFEIAANMFRLHGYCDTDIDDISKKCSVNLSLMREIFNTKTNVALEIMSH IQNHFDFEILIHAYDKKLPAYIRIESLSKAIEDYFIKCNGGCVFIKFSIEQMNKDDAFVEPIKRYFDSLNDAYKEIFLEV YQPDQAVEVASRVVSDLQGALIMMRVDGDIWPLQQFTERLLTRLRADMSHM
Sequences:
>Translated_211_residues MVSLKINTLLAYYIYLTGYPMPVEKNKPDEMFEIAANMFRLHGYCDTDIDDISKKCSVNLSLMREIFNTKTNVALEIMSH IQNHFDFEILIHAYDKKLPAYIRIESLSKAIEDYFIKCNGGCVFIKFSIEQMNKDDAFVEPIKRYFDSLNDAYKEIFLEV YQPDQAVEVASRVVSDLQGALIMMRVDGDIWPLQQFTERLLTRLRADMSHM >Mature_211_residues MVSLKINTLLAYYIYLTGYPMPVEKNKPDEMFEIAANMFRLHGYCDTDIDDISKKCSVNLSLMREIFNTKTNVALEIMSH IQNHFDFEILIHAYDKKLPAYIRIESLSKAIEDYFIKCNGGCVFIKFSIEQMNKDDAFVEPIKRYFDSLNDAYKEIFLEV YQPDQAVEVASRVVSDLQGALIMMRVDGDIWPLQQFTERLLTRLRADMSHM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24611; Mature: 24611
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLKINTLLAYYIYLTGYPMPVEKNKPDEMFEIAANMFRLHGYCDTDIDDISKKCSVNL CEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH SLMREIFNTKTNVALEIMSHIQNHFDFEILIHAYDKKLPAYIRIESLSKAIEDYFIKCNG HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHEEEECC GCVFIKFSIEQMNKDDAFVEPIKRYFDSLNDAYKEIFLEVYQPDQAVEVASRVVSDLQGA CEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCE LIMMRVDGDIWPLQQFTERLLTRLRADMSHM EEEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSLKINTLLAYYIYLTGYPMPVEKNKPDEMFEIAANMFRLHGYCDTDIDDISKKCSVNL CEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH SLMREIFNTKTNVALEIMSHIQNHFDFEILIHAYDKKLPAYIRIESLSKAIEDYFIKCNG HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHEEEECC GCVFIKFSIEQMNKDDAFVEPIKRYFDSLNDAYKEIFLEVYQPDQAVEVASRVVSDLQGA CEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCE LIMMRVDGDIWPLQQFTERLLTRLRADMSHM EEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA