Click here to switch to the map view.

The map label for this gene is ydjC [C]

Identifier: 182678621

GI number: 182678621

Start: 1862298

End: 1863161

Strand: Reverse

Name: ydjC [C]

Synonym: Bind_1647

Alternate gene names: 182678621

Gene position: 1863161-1862298 (Counterclockwise)

Preceding gene: 182678622

Following gene: 182678619

Centisome position: 44.68

GC content: 60.42

Gene sequence:

>864_bases
ATGCCTAAGGCCGGAAATGGCTTTTGCTTCAGTCTCTGCGCCGATGATTACGCGCTTTCTCCGGCCGTAAGCCTGGGGAT
TCGCGAAGCTTTGACGGCCCGCCGGCTCAGCGCGACGAGCGTGATGACGACCATGGCTGGCTGGCACCGGGAGGCACACG
ATTTACGGCCTTTTCACCCCGAGGCGGAGATTGGCCTGCATCTCAATTTGACCTCGGGCACGCCGCTCGGGGCCATGCCA
TGTTTCGCCCCCACGGGCCGTTTGCCGCCGATCGGCCGACTCATCAAGGCCGCCTATGGGAGAACTTTGCCTGAAGCCGA
GATCCGGGCAGAAATTTCGCGTCAGATCGATGCGTTCATAGACTCATTCGGGGCCGCACCCGATTATATCGACGGCCATC
AGCATGTGCAGGCACTGCCCGGGATCCGCCTCTGGCTGCTCGAAACGCTCGCGGAAAAGGGATTGACCGGCAAGCTCTGG
CTGCGCGATAGCGGCGACAGCTTGTCTCGTATCATCATGCGGGGAGGAGAGCTTTCCAAGGCCTTGATGGTCGCGGGATT
CGCGCGCGGTTTCGCAAGGATGGCGGCGGCGCATGGATTTGCCTGCAACGAGGGTTTCGCCGGATTTTCCGCTTTCGCCC
CCGACGAAAATTATGGGCAGGCCTTCGCGCATTTTCTGACGGCGCCGGGAAAAAGGCATCTCATCATGTGCCATCCGGGC
CATTGCGACGAGGAATTGGCCGCGCTCGATCCGGTGACCACCAGCCGAGAAAAGGAACTGGCTTTCCTTCTCTCGGATGA
TTTCTTGCGCCTGCTCGATCAGCGCAAGGCGCGACTTTCACGCCTTGCCATCATCAGGAATTAG

Upstream 100 bases:

>100_bases
ATAGAAGATGGGCGGAAACCACAATGCGGGTGACGGCGTATGCTCTTTCAGGGTTCGACCTACGGCGTTAGAGAGGAGTG
GCCAATTATGAGGAATTCCC

Downstream 100 bases:

>100_bases
CCGACAGCCTTGGTGTAGAGCTCTTCGACATATTCCCAGTTCACGAGGCTATCGACGAAGGCCTTGAGATAGTCGGGACG
GCGATTGCGATAGTCGATAT

Product: YdjC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MPKAGNGFCFSLCADDYALSPAVSLGIREALTARRLSATSVMTTMAGWHREAHDLRPFHPEAEIGLHLNLTSGTPLGAMP
CFAPTGRLPPIGRLIKAAYGRTLPEAEIRAEISRQIDAFIDSFGAAPDYIDGHQHVQALPGIRLWLLETLAEKGLTGKLW
LRDSGDSLSRIIMRGGELSKALMVAGFARGFARMAAAHGFACNEGFAGFSAFAPDENYGQAFAHFLTAPGKRHLIMCHPG
HCDEELAALDPVTTSREKELAFLLSDDFLRLLDQRKARLSRLAIIRN

Sequences:

>Translated_287_residues
MPKAGNGFCFSLCADDYALSPAVSLGIREALTARRLSATSVMTTMAGWHREAHDLRPFHPEAEIGLHLNLTSGTPLGAMP
CFAPTGRLPPIGRLIKAAYGRTLPEAEIRAEISRQIDAFIDSFGAAPDYIDGHQHVQALPGIRLWLLETLAEKGLTGKLW
LRDSGDSLSRIIMRGGELSKALMVAGFARGFARMAAAHGFACNEGFAGFSAFAPDENYGQAFAHFLTAPGKRHLIMCHPG
HCDEELAALDPVTTSREKELAFLLSDDFLRLLDQRKARLSRLAIIRN
>Mature_286_residues
PKAGNGFCFSLCADDYALSPAVSLGIREALTARRLSATSVMTTMAGWHREAHDLRPFHPEAEIGLHLNLTSGTPLGAMPC
FAPTGRLPPIGRLIKAAYGRTLPEAEIRAEISRQIDAFIDSFGAAPDYIDGHQHVQALPGIRLWLLETLAEKGLTGKLWL
RDSGDSLSRIIMRGGELSKALMVAGFARGFARMAAAHGFACNEGFAGFSAFAPDENYGQAFAHFLTAPGKRHLIMCHPGH
CDEELAALDPVTTSREKELAFLLSDDFLRLLDQRKARLSRLAIIRN

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Escherichia coli, GI1788028, Length=143, Percent_Identity=34.2657342657343, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 31237; Mature: 31106

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAGNGFCFSLCADDYALSPAVSLGIREALTARRLSATSVMTTMAGWHREAHDLRPFHP
CCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAEIGLHLNLTSGTPLGAMPCFAPTGRLPPIGRLIKAAYGRTLPEAEIRAEISRQIDAFI
CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DSFGAAPDYIDGHQHVQALPGIRLWLLETLAEKGLTGKLWLRDSGDSLSRIIMRGGELSK
HHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHH
ALMVAGFARGFARMAAAHGFACNEGFAGFSAFAPDENYGQAFAHFLTAPGKRHLIMCHPG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
HCDEELAALDPVTTSREKELAFLLSDDFLRLLDQRKARLSRLAIIRN
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKAGNGFCFSLCADDYALSPAVSLGIREALTARRLSATSVMTTMAGWHREAHDLRPFHP
CCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAEIGLHLNLTSGTPLGAMPCFAPTGRLPPIGRLIKAAYGRTLPEAEIRAEISRQIDAFI
CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DSFGAAPDYIDGHQHVQALPGIRLWLLETLAEKGLTGKLWLRDSGDSLSRIIMRGGELSK
HHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHH
ALMVAGFARGFARMAAAHGFACNEGFAGFSAFAPDENYGQAFAHFLTAPGKRHLIMCHPG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
HCDEELAALDPVTTSREKELAFLLSDDFLRLLDQRKARLSRLAIIRN
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA