| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678552
Identifier: 182678552
GI number: 182678552
Start: 1779791
End: 1780462
Strand: Reverse
Name: 182678552
Synonym: Bind_1577
Alternate gene names: NA
Gene position: 1780462-1779791 (Counterclockwise)
Preceding gene: 182678553
Following gene: 182678550
Centisome position: 42.7
GC content: 46.73
Gene sequence:
>672_bases ATGCCAAAGTGTTTTAAGCAAAGATTGACCACAATCGCCGTTGGTGCCGCTACAATATTCTTGCCTGCCGCTGGTGTAGG ACAGCCAGAATCAGCCCATAATTCGGGCGACTGCACAATCCTAGTCCAAGGCAACAATAATCATGTTGCTGTATCGGGTC CATGCGCGCCTGCCAAATACGTGCAGGTGGCCGAAGCCTCAATTTCAGATCAGACTCCAATGCCACAGGCCGAGCGATCC AGTCTCCAATTTACGGTCAGGGAGTTCGTATTCGATCCACACTCTAAAATAGTCTATGCGAGTGTAAGCGTAGTGAACCA TTCAGCAGAAGAGGCCTATCTTCAAATTATTCCTTCCCTTTCAAGCCTTGAACTCTCGGACCCGCCTGCTTCATTGCCAA ATTTCGAGGTGCATGGGCTCGGAACGTGTGTTTATTCAATCAACTTCGCAAATCAATGTCCAGAGCATGTTTCCGATATC AATATCACAACGCTTGCGCCTGAGCAGCAATTGGGATTCCGGCTGATTGGTCACTTGACGAATCCACGTGAAAATACAGC CACCTCTAGTGGCTCGCTTAACCTTGTCTTTTTAAGAAAAATCAATAACAAAAGTAAATATACGAGGCTGGACGTTTCTT TCATGGGCGTAAAATTAGCTGAAAGCCCATAA
Upstream 100 bases:
>100_bases ACAGAGAGAGCACTTCGAATTCCATCATAAACAATGGCAACAATGTTAATATCATTCGTGGAGTAGGAAATTCTATTTCC ATTAATAGTGGAAAGTAATA
Downstream 100 bases:
>100_bases ATCGAGACTCGCAGCGAAGTGTCAAACCGAAATCGATCCCATTTGTGGGATCGATTTGATACATTTTCGAAGAGAGCGTT AACCAAAAACGGATGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPKCFKQRLTTIAVGAATIFLPAAGVGQPESAHNSGDCTILVQGNNNHVAVSGPCAPAKYVQVAEASISDQTPMPQAERS SLQFTVREFVFDPHSKIVYASVSVVNHSAEEAYLQIIPSLSSLELSDPPASLPNFEVHGLGTCVYSINFANQCPEHVSDI NITTLAPEQQLGFRLIGHLTNPRENTATSSGSLNLVFLRKINNKSKYTRLDVSFMGVKLAESP
Sequences:
>Translated_223_residues MPKCFKQRLTTIAVGAATIFLPAAGVGQPESAHNSGDCTILVQGNNNHVAVSGPCAPAKYVQVAEASISDQTPMPQAERS SLQFTVREFVFDPHSKIVYASVSVVNHSAEEAYLQIIPSLSSLELSDPPASLPNFEVHGLGTCVYSINFANQCPEHVSDI NITTLAPEQQLGFRLIGHLTNPRENTATSSGSLNLVFLRKINNKSKYTRLDVSFMGVKLAESP >Mature_222_residues PKCFKQRLTTIAVGAATIFLPAAGVGQPESAHNSGDCTILVQGNNNHVAVSGPCAPAKYVQVAEASISDQTPMPQAERSS LQFTVREFVFDPHSKIVYASVSVVNHSAEEAYLQIIPSLSSLELSDPPASLPNFEVHGLGTCVYSINFANQCPEHVSDIN ITTLAPEQQLGFRLIGHLTNPRENTATSSGSLNLVFLRKINNKSKYTRLDVSFMGVKLAESP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23996; Mature: 23865
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKCFKQRLTTIAVGAATIFLPAAGVGQPESAHNSGDCTILVQGNNNHVAVSGPCAPAKY CCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHH VQVAEASISDQTPMPQAERSSLQFTVREFVFDPHSKIVYASVSVVNHSAEEAYLQIIPSL HHHHHCCCCCCCCCCCCHHHHHEEEEHHHHCCCCCCEEEEEEEEECCCHHHHHHHHCCCC SSLELSDPPASLPNFEVHGLGTCVYSINFANQCPEHVSDINITTLAPEQQLGFRLIGHLT CCCCCCCCCCCCCCEEEEEEEEEEEEEECHHCCHHHHHCCEEEEECCCHHHCCEEEECCC NPRENTATSSGSLNLVFLRKINNKSKYTRLDVSFMGVKLAESP CCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEECCC >Mature Secondary Structure PKCFKQRLTTIAVGAATIFLPAAGVGQPESAHNSGDCTILVQGNNNHVAVSGPCAPAKY CHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHH VQVAEASISDQTPMPQAERSSLQFTVREFVFDPHSKIVYASVSVVNHSAEEAYLQIIPSL HHHHHCCCCCCCCCCCCHHHHHEEEEHHHHCCCCCCEEEEEEEEECCCHHHHHHHHCCCC SSLELSDPPASLPNFEVHGLGTCVYSINFANQCPEHVSDINITTLAPEQQLGFRLIGHLT CCCCCCCCCCCCCCEEEEEEEEEEEEEECHHCCHHHHHCCEEEEECCCHHHCCEEEECCC NPRENTATSSGSLNLVFLRKINNKSKYTRLDVSFMGVKLAESP CCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA