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The map label for this gene is bkdR [H]

Identifier: 182678544

GI number: 182678544

Start: 1772565

End: 1773083

Strand: Reverse

Name: bkdR [H]

Synonym: Bind_1569

Alternate gene names: 182678544

Gene position: 1773083-1772565 (Counterclockwise)

Preceding gene: 182678546

Following gene: 182678543

Centisome position: 42.52

GC content: 63.58

Gene sequence:

>519_bases
ATGGAGCTCGACCGTTTAGACCAGGCCATTCTCCGCGCTCTCGCCGATGATGCCCGGCTCAGCATCGCCGATCTCGCGCC
ACGCGTCGGCCTATCGGCCAGTGCCTGCGCCCGGCGCCTCAAGGCGCTTGAGGAGCAAGGCATGATCAAGGGCTATCATC
TGGCGGTGGATCCGCGCCGGCTCGGCTATAAAATGACGGCCTTGGTGCGCGTCACGCTCGATAGTCAGAGAGAGGAGGCG
CTGGAGGCCTTTGAGCGCGCCGTCGTGCTTTCCCCCTCCATCATGCGGTGTCATCTCTTGTCCGGCAGCGCGGATTATCT
TTTAACGGTCCTCGCCCGCGATATGGAGGATTTCGAAGCGATCTACCGGACCGAACTCTCACGCCTGCCCCATGTCGCCC
GTCTCGAATCGAGCTTTGCCATGCGCGATGTCGTCGATCGCCTGTTCCCGCCCTCGGTGCTCGGGGCGTCCATACCCGTG
CCGTCCCGATCCACTCCCCCCAAACGGCGCTCGACTTGA

Upstream 100 bases:

>100_bases
ATGCGCTCTTGACGCAATTTCCGATCTTCTTTCGCCTGGAACCACTTATTTTTGCCAGATAATAGCGCATTTTTGTAAAA
ATACGCAGGAATCCCGCACC

Downstream 100 bases:

>100_bases
GAGCAAAGCTGGACCAAATTTGTAAAACCCGGCGGATGACTTCCACGAGCCCGGCGAAGCTGACGTCAAACTGAATGAAT
CGATGCGGAAGAGGGCGGTA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MELDRLDQAILRALADDARLSIADLAPRVGLSASACARRLKALEEQGMIKGYHLAVDPRRLGYKMTALVRVTLDSQREEA
LEAFERAVVLSPSIMRCHLLSGSADYLLTVLARDMEDFEAIYRTELSRLPHVARLESSFAMRDVVDRLFPPSVLGASIPV
PSRSTPPKRRST

Sequences:

>Translated_172_residues
MELDRLDQAILRALADDARLSIADLAPRVGLSASACARRLKALEEQGMIKGYHLAVDPRRLGYKMTALVRVTLDSQREEA
LEAFERAVVLSPSIMRCHLLSGSADYLLTVLARDMEDFEAIYRTELSRLPHVARLESSFAMRDVVDRLFPPSVLGASIPV
PSRSTPPKRRST
>Mature_172_residues
MELDRLDQAILRALADDARLSIADLAPRVGLSASACARRLKALEEQGMIKGYHLAVDPRRLGYKMTALVRVTLDSQREEA
LEAFERAVVLSPSIMRCHLLSGSADYLLTVLARDMEDFEAIYRTELSRLPHVARLESSFAMRDVVDRLFPPSVLGASIPV
PSRSTPPKRRST

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=37.0629370629371, Blast_Score=97, Evalue=4e-22,
Organism=Escherichia coli, GI87081742, Length=142, Percent_Identity=30.9859154929577, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19146; Mature: 19146

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDRLDQAILRALADDARLSIADLAPRVGLSASACARRLKALEEQGMIKGYHLAVDPRR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHH
LGYKMTALVRVTLDSQREEALEAFERAVVLSPSIMRCHLLSGSADYLLTVLARDMEDFEA
HCHHHHHHEEEHHCCHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
IYRTELSRLPHVARLESSFAMRDVVDRLFPPSVLGASIPVPSRSTPPKRRST
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MELDRLDQAILRALADDARLSIADLAPRVGLSASACARRLKALEEQGMIKGYHLAVDPRR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHH
LGYKMTALVRVTLDSQREEALEAFERAVVLSPSIMRCHLLSGSADYLLTVLARDMEDFEA
HCHHHHHHEEEHHCCHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
IYRTELSRLPHVARLESSFAMRDVVDRLFPPSVLGASIPVPSRSTPPKRRST
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]