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The map label for this gene is recJ [H]

Identifier: 182678538

GI number: 182678538

Start: 1764628

End: 1766460

Strand: Reverse

Name: recJ [H]

Synonym: Bind_1563

Alternate gene names: 182678538

Gene position: 1766460-1764628 (Counterclockwise)

Preceding gene: 182678542

Following gene: 182678537

Centisome position: 42.36

GC content: 63.18

Gene sequence:

>1833_bases
GTGTCGAAACCGCTTACGCCCCCATCCTCCCGTCCGTTTCTCAATGTCGAACGCTCCGTCCAGGGACGGGTTTGGCGTGA
TCGGCTGGATGCTTCCGGCCAGGCGCAAGCCCTCGCGCTCGCGCAGATTCATGGCCATGGAGACCTTCTGTCCCGTGTGC
TCGCCGGGCGCGGCATTACTCCCGAGGACTGCGAGGCCTATCTCGATCCAAGCCTGCGCCGGCTGATGCCAGACCCGACA
ATCCTGCTCGACATGGACAAGGCCGCGGTGCGTATGGCTCGCGCCATCATGGCCGGTGAAAAAATCGCGATTTTTGGGGA
TTACGACGTCGATGGCGCGTCGTCCTCGGCCTTGCTCGCCGATTATTTCACCGCCTGCGGCACACCGTTCCAGATCCATA
TTCCCGACCGTATTTTCGAAGGCTATGGGCCGAATGTCGACGCGATCCAGGCGCTGGCCGCCGGAGGCGCAAAACTGCTC
GTGACCGTGGATTGCGGCACGACAAGCCACAATCCGCTGGGGGAAGCCGCCAAGCTTGGTCTCGACCCGATCGTGCTCGA
TCATCATCAGGCACCTGCCGATTTGCCGGAAGCGATCATCGTCAATCCCAATCGACAGGATGATCTTTCCGGTCTCGGCC
AACTCTGCGCGGCGGGTGTCGTCTTCATGCTGCTCGTCGCTCTCAACCGGCGCTTGCGCGAACAGGGTTTTTTCACCGCG
GAGCGGCGTGAACCCGATCTCCTCGCCTTTCTTGATCTCGTCGCGCTGGCGACCGTCGCCGATGTCGCCCCCCTGACAGG
CCTCAATCGCGCCTTTGTCACCAAGGGTCTGGCGGTCATGCAGATGCGGCAGCGCGCCGGGCTGCGGGCTCTCTTCGATT
GTGCTGGCGCGCGGGAAGCCCCCAAAGCCGGTCATCTCGGTTTTCTGATTGGACCGAGAATCAATGCCGGGGGGCGAATC
GGCGATGCGGCGCTCGGCGCGCGCCTGCTGATCGAAAGAGATCAGATCAAAGCCGAAGAAATCGCCAGACGACTCGATAC
GCTCAACCGCGAGCGTCAGGTGATCGAGGCCGAAACACTCGAACAGGCCTTGCTGCAAGCGGAAGCGGAGCAGGGGCTTC
AGGACGATGCCAAGGCGGGTGCTGCCATCGTGACAGCCTCGGAGGATTGGCATCCGGGAATCGTCGGCCTCGTCGCCACG
CGACTCAAGGATAAATATCGTTGTCCGGCTTTTGCCGTTGCGTTCAATGAATCGGGAATCGGCACCGGCTCTGGTCGCTC
CATCGCGGGTGTCGATCTCGGCCATGCCGTGCGTGAAGCGGTCGAGGCGGGCCTTCTCATCAAGGGCGGCGGCCACGCCA
TGGCGGCGGGCATCACCCTTGTGCGCGATCATCTTGCGGCCTTTCGCGCCTTTCTCGAGGAGAAACTCACTGAGGCTGTG
ACGGCTGGCCGTTCCGGTGACGCCTTGTTCGTCGATGCCGCCTTGACGGCCTCAGGCGCCAATCCTGCCCTGATGGCGTC
ATTGGAAAAAGCCGGCCCGTTCGGCGCCGGCAACCCGGAACCCGTCTTCGTGCTGCCAGCACATCGCCTGATGGATGCGT
CGGTGGTGGGCAATGGCCATGTGCGTTTTCGGGCCGAGGCGGGCGATGGCGCGCGCATCGAGGGAATCGCTTTTCGCTCT
GCCGCCGAGCCCCTGGGCGATGCCTTGCTCGCCGGACGCGGCACGAAGATGCATTTTGCCGGGACTTTGATGCTCGACCG
CTTCGGTGGCCGCGAGCGCGTCCAGATGCGGCTCACCGATCTTGCGCCGCTCGCCACACAAAAAACTTTGTGA

Upstream 100 bases:

>100_bases
GCTGGATTTTGGTCATGGCCAAGGTTTGTTTCTGGGGATCATGCCCTGGCAGAGTTTTCGGCGCCTCGCTTTTCTCAACA
ACCGGCCGTAGAATCGGAGC

Downstream 100 bases:

>100_bases
GCTTGCAAGCTGGTGAAAGCTTCATTATACACCCGCCATCGCATCGTTGCAGTGACGGCGCGATCCTTCGGTTCCCCTCG
GTTTTGAGGGGCGATGCGCT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MSKPLTPPSSRPFLNVERSVQGRVWRDRLDASGQAQALALAQIHGHGDLLSRVLAGRGITPEDCEAYLDPSLRRLMPDPT
ILLDMDKAAVRMARAIMAGEKIAIFGDYDVDGASSSALLADYFTACGTPFQIHIPDRIFEGYGPNVDAIQALAAGGAKLL
VTVDCGTTSHNPLGEAAKLGLDPIVLDHHQAPADLPEAIIVNPNRQDDLSGLGQLCAAGVVFMLLVALNRRLREQGFFTA
ERREPDLLAFLDLVALATVADVAPLTGLNRAFVTKGLAVMQMRQRAGLRALFDCAGAREAPKAGHLGFLIGPRINAGGRI
GDAALGARLLIERDQIKAEEIARRLDTLNRERQVIEAETLEQALLQAEAEQGLQDDAKAGAAIVTASEDWHPGIVGLVAT
RLKDKYRCPAFAVAFNESGIGTGSGRSIAGVDLGHAVREAVEAGLLIKGGGHAMAAGITLVRDHLAAFRAFLEEKLTEAV
TAGRSGDALFVDAALTASGANPALMASLEKAGPFGAGNPEPVFVLPAHRLMDASVVGNGHVRFRAEAGDGARIEGIAFRS
AAEPLGDALLAGRGTKMHFAGTLMLDRFGGRERVQMRLTDLAPLATQKTL

Sequences:

>Translated_610_residues
MSKPLTPPSSRPFLNVERSVQGRVWRDRLDASGQAQALALAQIHGHGDLLSRVLAGRGITPEDCEAYLDPSLRRLMPDPT
ILLDMDKAAVRMARAIMAGEKIAIFGDYDVDGASSSALLADYFTACGTPFQIHIPDRIFEGYGPNVDAIQALAAGGAKLL
VTVDCGTTSHNPLGEAAKLGLDPIVLDHHQAPADLPEAIIVNPNRQDDLSGLGQLCAAGVVFMLLVALNRRLREQGFFTA
ERREPDLLAFLDLVALATVADVAPLTGLNRAFVTKGLAVMQMRQRAGLRALFDCAGAREAPKAGHLGFLIGPRINAGGRI
GDAALGARLLIERDQIKAEEIARRLDTLNRERQVIEAETLEQALLQAEAEQGLQDDAKAGAAIVTASEDWHPGIVGLVAT
RLKDKYRCPAFAVAFNESGIGTGSGRSIAGVDLGHAVREAVEAGLLIKGGGHAMAAGITLVRDHLAAFRAFLEEKLTEAV
TAGRSGDALFVDAALTASGANPALMASLEKAGPFGAGNPEPVFVLPAHRLMDASVVGNGHVRFRAEAGDGARIEGIAFRS
AAEPLGDALLAGRGTKMHFAGTLMLDRFGGRERVQMRLTDLAPLATQKTL
>Mature_609_residues
SKPLTPPSSRPFLNVERSVQGRVWRDRLDASGQAQALALAQIHGHGDLLSRVLAGRGITPEDCEAYLDPSLRRLMPDPTI
LLDMDKAAVRMARAIMAGEKIAIFGDYDVDGASSSALLADYFTACGTPFQIHIPDRIFEGYGPNVDAIQALAAGGAKLLV
TVDCGTTSHNPLGEAAKLGLDPIVLDHHQAPADLPEAIIVNPNRQDDLSGLGQLCAAGVVFMLLVALNRRLREQGFFTAE
RREPDLLAFLDLVALATVADVAPLTGLNRAFVTKGLAVMQMRQRAGLRALFDCAGAREAPKAGHLGFLIGPRINAGGRIG
DAALGARLLIERDQIKAEEIARRLDTLNRERQVIEAETLEQALLQAEAEQGLQDDAKAGAAIVTASEDWHPGIVGLVATR
LKDKYRCPAFAVAFNESGIGTGSGRSIAGVDLGHAVREAVEAGLLIKGGGHAMAAGITLVRDHLAAFRAFLEEKLTEAVT
AGRSGDALFVDAALTASGANPALMASLEKAGPFGAGNPEPVFVLPAHRLMDASVVGNGHVRFRAEAGDGARIEGIAFRSA
AEPLGDALLAGRGTKMHFAGTLMLDRFGGRERVQMRLTDLAPLATQKTL

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=569, Percent_Identity=34.7978910369069, Blast_Score=261, Evalue=7e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 64470; Mature: 64339

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLTPPSSRPFLNVERSVQGRVWRDRLDASGQAQALALAQIHGHGDLLSRVLAGRGIT
CCCCCCCCCCCCCEEECHHHCCHHHHHHCCCCCCHHEEEEEEECCCHHHHHHHHHCCCCC
PEDCEAYLDPSLRRLMPDPTILLDMDKAAVRMARAIMAGEKIAIFGDYDVDGASSSALLA
HHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHH
DYFTACGTPFQIHIPDRIFEGYGPNVDAIQALAAGGAKLLVTVDCGTTSHNPLGEAAKLG
HHHHHCCCCEEEECCHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHCC
LDPIVLDHHQAPADLPEAIIVNPNRQDDLSGLGQLCAAGVVFMLLVALNRRLREQGFFTA
CCCEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ERREPDLLAFLDLVALATVADVAPLTGLNRAFVTKGLAVMQMRQRAGLRALFDCAGAREA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
PKAGHLGFLIGPRINAGGRIGDAALGARLLIERDQIKAEEIARRLDTLNRERQVIEAETL
CCCCCCEEEECCCCCCCCCCCHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EQALLQAEAEQGLQDDAKAGAAIVTASEDWHPGIVGLVATRLKDKYRCPAFAVAFNESGI
HHHHHHHHHHCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
GTGSGRSIAGVDLGHAVREAVEAGLLIKGGGHAMAAGITLVRDHLAAFRAFLEEKLTEAV
CCCCCCEEECCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGRSGDALFVDAALTASGANPALMASLEKAGPFGAGNPEPVFVLPAHRLMDASVVGNGH
HCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHCCEEECCCE
VRFRAEAGDGARIEGIAFRSAAEPLGDALLAGRGTKMHFAGTLMLDRFGGRERVQMRLTD
EEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEEEEHH
LAPLATQKTL
HCCCHHCCCC
>Mature Secondary Structure 
SKPLTPPSSRPFLNVERSVQGRVWRDRLDASGQAQALALAQIHGHGDLLSRVLAGRGIT
CCCCCCCCCCCCEEECHHHCCHHHHHHCCCCCCHHEEEEEEECCCHHHHHHHHHCCCCC
PEDCEAYLDPSLRRLMPDPTILLDMDKAAVRMARAIMAGEKIAIFGDYDVDGASSSALLA
HHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHH
DYFTACGTPFQIHIPDRIFEGYGPNVDAIQALAAGGAKLLVTVDCGTTSHNPLGEAAKLG
HHHHHCCCCEEEECCHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHCC
LDPIVLDHHQAPADLPEAIIVNPNRQDDLSGLGQLCAAGVVFMLLVALNRRLREQGFFTA
CCCEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ERREPDLLAFLDLVALATVADVAPLTGLNRAFVTKGLAVMQMRQRAGLRALFDCAGAREA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
PKAGHLGFLIGPRINAGGRIGDAALGARLLIERDQIKAEEIARRLDTLNRERQVIEAETL
CCCCCCEEEECCCCCCCCCCCHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EQALLQAEAEQGLQDDAKAGAAIVTASEDWHPGIVGLVATRLKDKYRCPAFAVAFNESGI
HHHHHHHHHHCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
GTGSGRSIAGVDLGHAVREAVEAGLLIKGGGHAMAAGITLVRDHLAAFRAFLEEKLTEAV
CCCCCCEEECCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGRSGDALFVDAALTASGANPALMASLEKAGPFGAGNPEPVFVLPAHRLMDASVVGNGH
HCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHCCEEECCCE
VRFRAEAGDGARIEGIAFRSAAEPLGDALLAGRGTKMHFAGTLMLDRFGGRERVQMRLTD
EEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEEEEHH
LAPLATQKTL
HCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]